RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 USP17L20D6RJB6 530 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 SGSM2O43147 1006 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 PRDM1O75626 825 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 OSBPP22059 807 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 HERVK_113P62684 666 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 CTDSPL2Q05D32 466 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 USP17L24Q0WX57 530 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 FBXO46Q6PJ61 603 aaPredicted RBP9.81□□□□□ -0.84
NEK3-209ENST00000618856 SKAP1Q86WV1 359 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 CLEC10AQ8IUN9 316 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 ZNF444Q8N0Y2 327 aaPredicted RBP9.81□□□□□ -0.84
NEK3-209ENST00000618856 GTF3C2Q8WUA4 911 aaPredicted RBP9.81□□□□□ -0.84
NEK3-209ENST00000618856 STAG1Q8WVM7 1258 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 ABHD8Q96I13 439 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 TRIM47Q96LD4 638 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 ARHGAP39Q9C0H5 1083 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 SH2D4AQ9H788 454 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 ARHGEF10LQ9HCE6 1279 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 INCENPQ9NQS7 918 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 IL17RBQ9NRM6 502 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 RBPJLQ9UBG7 517 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 ADAMTS5Q9UNA0 930 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 PTPN22Q9Y2R2 807 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 ZSWIM8A7E2V4 1837 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 PARP14Q460N5 1801 aa9.8□□□□□ -0.84
NEK3-209ENST00000618856 BRCA2P51587 3418 aa9.8□□□□□ -0.84
NEK3-209ENST00000618856 CNMDO75829 334 aa9.8□□□□□ -0.84
NEK3-209ENST00000618856 NEFLP07196 543 aa9.8□□□□□ -0.84
NEK3-209ENST00000618856 PRMT2P55345 433 aa9.8□□□□□ -0.84
NEK3-209ENST00000618856 TFAP4Q01664 338 aa9.8□□□□□ -0.84
NEK3-209ENST00000618856 ARHGEF6Q15052 776 aa9.8□□□□□ -0.84
NEK3-209ENST00000618856 AKNAD1Q5T1N1 836 aa9.8□□□□□ -0.84
NEK3-209ENST00000618856 IFFO2Q5TF58 517 aa9.8□□□□□ -0.84
NEK3-209ENST00000618856 TBC1D10CQ8IV04 446 aa9.8□□□□□ -0.84
NEK3-209ENST00000618856 GMCL1P1Q8NEA9 526 aa9.8□□□□□ -0.84
NEK3-209ENST00000618856 NKX2-3Q8TAU0 364 aa9.8□□□□□ -0.84
NEK3-209ENST00000618856 SMCR8Q8TEV9 937 aaPredicted RBP9.8□□□□□ -0.84
NEK3-209ENST00000618856 CEP95Q96GE4 821 aa9.8□□□□□ -0.84
NEK3-209ENST00000618856 FEZ1Q99689 392 aa9.8□□□□□ -0.84
NEK3-209ENST00000618856 RPAP3Q9H6T3 665 aaPredicted RBP9.8□□□□□ -0.84
NEK3-209ENST00000618856 EFCC1Q9HA90 598 aa9.8□□□□□ -0.84
NEK3-209ENST00000618856 TXNRD2Q9NNW7 524 aa9.8□□□□□ -0.84
NEK3-209ENST00000618856 TCP11L1Q9NUJ3 509 aa9.8□□□□□ -0.84
NEK3-209ENST00000618856 PPP4R2Q9NY27 417 aa9.8□□□□□ -0.84
NEK3-209ENST00000618856 MYPNQ86TC9 1320 aa9.8□□□□□ -0.84
NEK3-209ENST00000618856 MGAMO43451 1857 aa9.79□□□□□ -0.84
NEK3-209ENST00000618856 SPDYE16A6NNV3 312 aaPredicted RBP9.79□□□□□ -0.84
NEK3-209ENST00000618856 WDR46O15213 610 aaKnown RBP9.79□□□□□ -0.84
NEK3-209ENST00000618856 TTLL1O95922 423 aa9.79□□□□□ -0.84
NEK3-209ENST00000618856 PSMC4P43686 418 aa9.79□□□□□ -0.84
NEK3-209ENST00000618856 IRX3P78415 501 aaPredicted RBP9.79□□□□□ -0.84
NEK3-209ENST00000618856 COG2Q14746 738 aa9.79□□□□□ -0.84
NEK3-209ENST00000618856 ZYXQ15942 572 aaKnown RBP9.79□□□□□ -0.84
NEK3-209ENST00000618856 FAM47AQ5JRC9 791 aa9.79□□□□□ -0.84
NEK3-209ENST00000618856 ANKRD13CQ8N6S4 541 aa9.79□□□□□ -0.84
NEK3-209ENST00000618856 RUFY2Q8WXA3 655 aa9.79□□□□□ -0.84
NEK3-209ENST00000618856 MAP4K1Q92918 833 aa9.79□□□□□ -0.84
NEK3-209ENST00000618856 HPS5Q9UPZ3 1129 aa9.79□□□□□ -0.84
NEK3-209ENST00000618856 TRIM17Q9Y577 477 aa9.79□□□□□ -0.84
NEK3-209ENST00000618856 F5H6K3 240 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 ZNF213O14771 459 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 NDUFB10O96000 172 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 TSPY3P0CV98 308 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 TSPY8P0CW00 308 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 PTH1RQ03431 593 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 KLRC3Q07444 240 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 Q3C1V9 767 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 PPP4R3BQ5MIZ7 849 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 STK11IPQ8N1F8 1099 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 GPRC5AQ8NFJ5 357 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 ANKS1AQ92625 1134 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 ARMC5Q96C12 935 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 GMCL1Q96IK5 515 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 GOPCQ9HD26 462 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 HOXC10Q9NYD6 342 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 CLIP2Q9UDT6 1046 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 SRRDQ9UH36 339 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 CTNNA3Q9UI47 895 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 GJD2Q9UKL4 321 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 RABGAP1Q9Y3P9 1069 aa9.78□□□□□ -0.84
NEK3-209ENST00000618856 PLXNB2O15031 1838 aa9.77□□□□□ -0.84
NEK3-209ENST00000618856 NMT2O60551 498 aa9.77□□□□□ -0.85
NEK3-209ENST00000618856 FCGRTP55899 365 aa9.77□□□□□ -0.85
NEK3-209ENST00000618856 HAND2P61296 217 aa9.77□□□□□ -0.85
NEK3-209ENST00000618856 ERVK-9P63128 1117 aa9.77□□□□□ -0.85
NEK3-209ENST00000618856 ERVK-24P63145 666 aa9.77□□□□□ -0.85
NEK3-209ENST00000618856 IRF5Q13568 498 aa9.77□□□□□ -0.85
NEK3-209ENST00000618856 KIF22Q14807 665 aa9.77□□□□□ -0.85
NEK3-209ENST00000618856 RCSD1Q6JBY9 416 aa9.77□□□□□ -0.85
NEK3-209ENST00000618856 MFSD6Q6ZSS7 791 aa9.77□□□□□ -0.85
NEK3-209ENST00000618856 REPS2Q8NFH8 660 aa9.77□□□□□ -0.85
NEK3-209ENST00000618856 USP6NLQ92738 828 aa9.77□□□□□ -0.85
NEK3-209ENST00000618856 TTC14Q96N46 770 aa9.77□□□□□ -0.85
NEK3-209ENST00000618856 ESYT1Q9BSJ8 1104 aa9.77□□□□□ -0.85
NEK3-209ENST00000618856 LSG1Q9H089 658 aaKnown RBP9.77□□□□□ -0.85
NEK3-209ENST00000618856 RNF41Q9H4P4 317 aaPredicted RBP9.77□□□□□ -0.85
NEK3-209ENST00000618856 BTBD7Q9P203 1132 aa9.77□□□□□ -0.85
NEK3-209ENST00000618856 NEDD4P46934 1319 aa9.77□□□□□ -0.85
NEK3-209ENST00000618856 MYH4Q9Y623 1939 aa9.76□□□□□ -0.85
NEK3-209ENST00000618856 TSPY2A6NKD2 308 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms