RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 DUOX1Q9NRD9 1551 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 hCG_1642624A0A1W2PR95 340 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 IFIT3O14879 490 aaKnown RBP4.97□□□□□ -1.61
SEC22B-202ENST00000618538 IGSF3O75054 1194 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 UQCRFS1P1P0C7P4 283 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 GSDMDP57764 484 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 MYL5Q02045 173 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 SEC23AQ15436 765 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 NPY5RQ15761 445 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 PKN1Q16512 942 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 ZNF697Q5TEC3 545 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 SYT10Q6XYQ8 523 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 NFXL1Q6ZNB6 911 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 MROH5Q6ZUA9 1318 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 PNPLA7Q6ZV29 1317 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 SMIM5Q71RC9 77 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 VSTM4Q8IW00 320 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 REXO1L1PQ8IX06 675 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 TRMT44Q8IYL2 757 aaKnown RBP4.97□□□□□ -1.61
SEC22B-202ENST00000618538 RGS22Q8NE09 1264 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 SDR42E1Q8WUS8 393 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 STAG1Q8WVM7 1258 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 NAPBQ9H115 298 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 FAM53CQ9NYF3 392 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 BAZ2AQ9UIF9 1905 aaKnown RBP4.97□□□□□ -1.61
SEC22B-202ENST00000618538 DDX41Q9UJV9 622 aaKnown RBP4.97□□□□□ -1.61
SEC22B-202ENST00000618538 MAN1B1Q9UKM7 699 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 KCNH3Q9ULD8 1083 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 ZNF804BA4D1E1 1349 aa4.96□□□□□ -1.61
SEC22B-202ENST00000618538 ACTN4O43707 911 aaKnown RBP4.96□□□□□ -1.62
SEC22B-202ENST00000618538 CUTAO60888 179 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 CDKL5O76039 1030 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 ZNF18P17022 549 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 SFPQP23246 707 aaKnown RBP eCLIP4.96□□□□□ -1.62
SEC22B-202ENST00000618538 KLRK1P26718 216 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 CASP1P29466 404 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 CRKLP46109 303 aaKnown RBP4.96□□□□□ -1.62
SEC22B-202ENST00000618538 SARSP49591 514 aaKnown RBP4.96□□□□□ -1.62
SEC22B-202ENST00000618538 TBX2Q13207 712 aaPredicted RBP4.96□□□□□ -1.62
SEC22B-202ENST00000618538 RRP12Q5JTH9 1297 aaKnown RBP4.96□□□□□ -1.62
SEC22B-202ENST00000618538 APTXQ7Z2E3 356 aaKnown RBP4.96□□□□□ -1.62
SEC22B-202ENST00000618538 CRACR2BQ8N4Y2 399 aaPredicted RBP4.96□□□□□ -1.62
SEC22B-202ENST00000618538 CCDC150Q8NCX0 1101 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 KIF18AQ8NI77 898 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 CHMP4CQ96CF2 233 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 ST7Q9NRC1 585 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 SERTAD1Q9UHV2 236 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 TSKSQ9UJT2 592 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 ZHX1Q9UKY1 873 aaPredicted RBP4.96□□□□□ -1.62
SEC22B-202ENST00000618538 SLC12A7Q9Y666 1083 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 SLC4A4Q9Y6R1 1079 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 MYH2Q9UKX2 1941 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 DLEC1Q9Y238 1755 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 NRAPQ86VF7 1730 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 A0A0U1RQJ8 604 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 VWA3AA6NCI4 1184 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 PRDM1O75626 825 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 PLEKHA8P1O95397 391 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 SLC5A1P13866 664 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 VEGFAP15692 232 aaPredicted RBP4.96□□□□□ -1.62
SEC22B-202ENST00000618538 KCNJ6P48051 423 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 APLP1P51693 650 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 PRSS12P56730 875 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 DYNLL1P63167 89 aaKnown RBP4.96□□□□□ -1.62
SEC22B-202ENST00000618538 CHRNDQ07001 517 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 PPARAQ07869 468 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 SSRP1Q08945 709 aaKnown RBP4.96□□□□□ -1.62
SEC22B-202ENST00000618538 MAP3K12Q12852 859 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 DPYDQ12882 1025 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 MORC3Q14149 939 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 RTN1Q16799 776 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 NT5DC1Q5TFE4 455 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 ZNF654Q8IZM8 581 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 KRI1Q8N9T8 703 aaKnown RBP4.96□□□□□ -1.62
SEC22B-202ENST00000618538 SPATA20Q8TB22 786 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 ATRIPQ8WXE1 791 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 RIOK1Q9BRS2 568 aaKnown RBP4.96□□□□□ -1.62
SEC22B-202ENST00000618538 CSRNP2Q9H175 543 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 SAMSN1Q9NSI8 373 aaKnown RBP4.96□□□□□ -1.62
SEC22B-202ENST00000618538 CCDC87Q9NVE4 849 aa4.96□□□□□ -1.62
SEC22B-202ENST00000618538 COL5A3P25940 1745 aaPredicted RBP4.96□□□□□ -1.62
SEC22B-202ENST00000618538 MYH6P13533 1939 aa4.95□□□□□ -1.62
SEC22B-202ENST00000618538 RTL9Q8NET4 1388 aa4.95□□□□□ -1.62
SEC22B-202ENST00000618538 TNKSO95271 1327 aa4.95□□□□□ -1.62
SEC22B-202ENST00000618538 NPHP1O15259 732 aa4.95□□□□□ -1.62
SEC22B-202ENST00000618538 POLR2DO15514 142 aaKnown RBP4.95□□□□□ -1.62
SEC22B-202ENST00000618538 H2AFXP16104 143 aaPredicted RBP4.95□□□□□ -1.62
SEC22B-202ENST00000618538 GYG1P46976 350 aa4.95□□□□□ -1.62
SEC22B-202ENST00000618538 TDO2P48775 406 aa4.95□□□□□ -1.62
SEC22B-202ENST00000618538 UBASH3AP57075 661 aa4.95□□□□□ -1.62
SEC22B-202ENST00000618538 EN1Q05925 392 aaPredicted RBP4.95□□□□□ -1.62
SEC22B-202ENST00000618538 WTAPQ15007 396 aa4.95□□□□□ -1.62
SEC22B-202ENST00000618538 POSTNQ15063 836 aa4.95□□□□□ -1.62
SEC22B-202ENST00000618538 ERCC6LQ2NKX8 1250 aa4.95□□□□□ -1.62
SEC22B-202ENST00000618538 MFSD6Q6ZSS7 791 aa4.95□□□□□ -1.62
SEC22B-202ENST00000618538 TOGARAM2Q6ZUX3 1019 aa4.95□□□□□ -1.62
SEC22B-202ENST00000618538 PDILTQ8N807 584 aa4.95□□□□□ -1.62
SEC22B-202ENST00000618538 ENAHQ8N8S7 591 aaPredicted RBP4.95□□□□□ -1.62
SEC22B-202ENST00000618538 TC2NQ8N9U0 490 aa4.95□□□□□ -1.62
SEC22B-202ENST00000618538 CNNM3Q8NE01 707 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms