RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 ABCA9Q8IUA7 1624 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 LETM1O95202 739 aaPredicted RBP12.29□□□□□ -0.44
POLR2A-209ENST00000617998 HOOK3Q86VS8 718 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 TPH2Q8IWU9 490 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 GPC2Q8N158 579 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 TEKT3Q9BXF9 490 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 TSKSQ9UJT2 592 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 PHKA1P46020 1223 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 LRRC24Q50LG9 513 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 ANKRD44Q8N8A2 993 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 NACC1Q96RE7 527 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 TRIM5Q9C035 493 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 FRMD4BQ9Y2L6 1034 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 GOLGA6L3A6NEY3 463 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 PLA2G4DQ86XP0 818 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 TESK2Q96S53 571 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 RIOK3O14730 519 aaKnown RBP12.29□□□□□ -0.44
POLR2A-209ENST00000617998 CBFA2T2O43439 604 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 OATP04181 439 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 RNF207Q6ZRF8 634 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 NUDT18Q6ZVK8 323 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 CELF1Q92879 486 aaKnown RBP12.28□□□□□ -0.44
POLR2A-209ENST00000617998 NOX5Q96PH1 765 aa12.28□□□□□ -0.44
POLR2A-209ENST00000617998 KIF9Q9HAQ2 790 aa12.28□□□□□ -0.44
POLR2A-209ENST00000617998 SEPT9Q9UHD8 586 aaPredicted RBP12.28□□□□□ -0.44
POLR2A-209ENST00000617998 SLC8A2Q9UPR5 921 aa12.28□□□□□ -0.44
POLR2A-209ENST00000617998 CNTNAP4Q9C0A0 1308 aa12.28□□□□□ -0.44
POLR2A-209ENST00000617998 GPATCH4Q5T3I0 446 aaKnown RBP12.28□□□□□ -0.44
POLR2A-209ENST00000617998 ARMCX5Q6P1M9 558 aa12.28□□□□□ -0.44
POLR2A-209ENST00000617998 XRCC6P12956 609 aaKnown RBP eCLIP12.28□□□□□ -0.441e-10■■■■■ 63.4
POLR2A-209ENST00000617998 CCDC65Q8IXS2 484 aa12.28□□□□□ -0.44
POLR2A-209ENST00000617998 HAUS7Q99871 368 aa12.28□□□□□ -0.44
POLR2A-209ENST00000617998 FER1L4A9Z1Z3 1794 aa12.28□□□□□ -0.44
POLR2A-209ENST00000617998 GBP2P32456 591 aaPredicted RBP12.28□□□□□ -0.44
POLR2A-209ENST00000617998 GABPAQ06546 454 aa12.28□□□□□ -0.44
POLR2A-209ENST00000617998 Q6ZUG5 572 aa12.28□□□□□ -0.44
POLR2A-209ENST00000617998 KCTD1Q719H9 257 aa12.28□□□□□ -0.44
POLR2A-209ENST00000617998 TMEM87BQ96K49 555 aa12.28□□□□□ -0.44
POLR2A-209ENST00000617998 RMND1Q9NWS8 449 aa12.28□□□□□ -0.44
POLR2A-209ENST00000617998 LIMCH1Q9UPQ0 1083 aa12.28□□□□□ -0.44
POLR2A-209ENST00000617998 LRRIQ4A6NIV6 560 aa12.28□□□□□ -0.44
POLR2A-209ENST00000617998 ARL1P40616 181 aaPredicted RBP12.28□□□□□ -0.44
POLR2A-209ENST00000617998 STXBP2Q15833 593 aa12.28□□□□□ -0.44
POLR2A-209ENST00000617998 OR6J1Q8NGC5 347 aa12.28□□□□□ -0.44
POLR2A-209ENST00000617998 EIF4E1BA6NMX2 242 aaKnown RBP12.27□□□□□ -0.44
POLR2A-209ENST00000617998 DAPK3O43293 454 aa12.27□□□□□ -0.44
POLR2A-209ENST00000617998 INHBEP58166 350 aa12.27□□□□□ -0.44
POLR2A-209ENST00000617998 ATP6V0A1Q93050 837 aa12.27□□□□□ -0.44
POLR2A-209ENST00000617998 LARP6Q9BRS8 491 aaKnown RBP12.27□□□□□ -0.44
POLR2A-209ENST00000617998 MINPP1Q9UNW1 487 aa12.27□□□□□ -0.44
POLR2A-209ENST00000617998 V9GY48 417 aaPredicted RBP12.27□□□□□ -0.44
POLR2A-209ENST00000617998 PPP1R16BQ96T49 567 aa12.27□□□□□ -0.44
POLR2A-209ENST00000617998 AAASQ9NRG9 546 aa12.27□□□□□ -0.44
POLR2A-209ENST00000617998 USP42Q9H9J4 1324 aaKnown RBP12.27□□□□□ -0.45
POLR2A-209ENST00000617998 INO80B-WBP1J3KQ70 363 aa12.27□□□□□ -0.45
POLR2A-209ENST00000617998 TOMM70O94826 608 aa12.27□□□□□ -0.45
POLR2A-209ENST00000617998 SYDE2Q5VT97 1194 aa12.27□□□□□ -0.45
POLR2A-209ENST00000617998 INO80BQ9C086 356 aaPredicted RBP12.27□□□□□ -0.45
POLR2A-209ENST00000617998 DNM3Q9UQ16 869 aa12.27□□□□□ -0.45
POLR2A-209ENST00000617998 MARK3P27448 753 aa12.27□□□□□ -0.45
POLR2A-209ENST00000617998 NONOQ15233 471 aaKnown RBP eCLIP12.27□□□□□ -0.45
POLR2A-209ENST00000617998 KANK3Q6NY19 840 aa12.27□□□□□ -0.45
POLR2A-209ENST00000617998 KRT25Q7Z3Z0 450 aa12.27□□□□□ -0.45
POLR2A-209ENST00000617998 TBC1D16Q8TBP0 767 aa12.27□□□□□ -0.45
POLR2A-209ENST00000617998 SLC7A3Q8WY07 619 aa12.27□□□□□ -0.45
POLR2A-209ENST00000617998 TSHZ2Q9NRE2 1034 aa12.27□□□□□ -0.45
POLR2A-209ENST00000617998 C19orf81C9J6K1 198 aa12.27□□□□□ -0.45
POLR2A-209ENST00000617998 TXKP42681 527 aa12.27□□□□□ -0.45
POLR2A-209ENST00000617998 PGBD3Q8N328 593 aa12.27□□□□□ -0.45
POLR2A-209ENST00000617998 PRDM15P57071 1507 aaPredicted RBP12.27□□□□□ -0.45
POLR2A-209ENST00000617998 STAT3P40763 770 aa12.26□□□□□ -0.45
POLR2A-209ENST00000617998 PLA2R1Q13018 1463 aa12.26□□□□□ -0.45
POLR2A-209ENST00000617998 TBC1D8BQ0IIM8 1120 aa12.26□□□□□ -0.45
POLR2A-209ENST00000617998 SPA17Q15506 151 aa12.26□□□□□ -0.45
POLR2A-209ENST00000617998 RGMBQ6NW40 437 aa12.26□□□□□ -0.45
POLR2A-209ENST00000617998 KIAA1328Q86T90 577 aa12.26□□□□□ -0.45
POLR2A-209ENST00000617998 HMX1Q9NP08 348 aaPredicted RBP12.26□□□□□ -0.45
POLR2A-209ENST00000617998 CPA4Q9UI42 421 aa12.26□□□□□ -0.45
POLR2A-209ENST00000617998 CA12O43570 354 aa12.26□□□□□ -0.45
POLR2A-209ENST00000617998 SKIDA1Q1XH10 827 aa12.26□□□□□ -0.45
POLR2A-209ENST00000617998 REXO1Q8N1G1 1221 aaKnown RBP12.26□□□□□ -0.45
POLR2A-209ENST00000617998 MMS19Q96T76 1030 aa12.26□□□□□ -0.45
POLR2A-209ENST00000617998 TMEM39AQ9NV64 488 aa12.26□□□□□ -0.45
POLR2A-209ENST00000617998 ARID4AP29374 1257 aaPredicted RBP12.26□□□□□ -0.45
POLR2A-209ENST00000617998 KATNAL1Q9BW62 490 aa12.26□□□□□ -0.45
POLR2A-209ENST00000617998 PRR16Q569H4 304 aa12.26□□□□□ -0.45
POLR2A-209ENST00000617998 CC2D1AQ6P1N0 951 aaPredicted RBP12.26□□□□□ -0.45
POLR2A-209ENST00000617998 SMTNL1A8MU46 457 aa12.26□□□□□ -0.45
POLR2A-209ENST00000617998 RPL13P26373 211 aaKnown RBP12.26□□□□□ -0.45
POLR2A-209ENST00000617998 REM2Q8IYK8 340 aaPredicted RBP12.26□□□□□ -0.45
POLR2A-209ENST00000617998 ZNF280CQ8ND82 737 aa12.26□□□□□ -0.45
POLR2A-209ENST00000617998 GSDMBQ8TAX9 411 aa12.26□□□□□ -0.45
POLR2A-209ENST00000617998 H0YCG3 227 aa12.25□□□□□ -0.45
POLR2A-209ENST00000617998 SDSP20132 328 aa12.25□□□□□ -0.45
POLR2A-209ENST00000617998 ANXA13P27216 316 aa12.25□□□□□ -0.45
POLR2A-209ENST00000617998 GIMAP8Q8ND71 665 aaPredicted RBP12.25□□□□□ -0.45
POLR2A-209ENST00000617998 PDE6AP16499 860 aa12.25□□□□□ -0.45
POLR2A-209ENST00000617998 CAPNS2Q96L46 248 aa12.25□□□□□ -0.45
POLR2A-209ENST00000617998 RAVER2Q9HCJ3 691 aaKnown RBP12.25□□□□□ -0.45
POLR2A-209ENST00000617998 FNDC3AQ9Y2H6 1198 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms