RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 DGKZQ13574 1117 aa18.34■□□□□ 0.53
PCDHGC3-204ENST00000617222 WTAPQ15007 396 aa18.34■□□□□ 0.53
PCDHGC3-204ENST00000617222 IFIT1BQ5T764 474 aaKnown RBP18.34■□□□□ 0.53
PCDHGC3-204ENST00000617222 USP17L2Q6R6M4 530 aa18.34■□□□□ 0.53
PCDHGC3-204ENST00000617222 MS4A4AQ96JQ5 239 aa18.34■□□□□ 0.53
PCDHGC3-204ENST00000617222 KIAA1683Q9H0B3 1180 aa18.34■□□□□ 0.53
PCDHGC3-204ENST00000617222 MYH8P13535 1937 aa18.33■□□□□ 0.53
PCDHGC3-204ENST00000617222 A0A0G2JLL6 359 aaPredicted RBP18.33■□□□□ 0.52
PCDHGC3-204ENST00000617222 AOC2O75106 756 aa18.33■□□□□ 0.52
PCDHGC3-204ENST00000617222 VEGFBP49765 207 aa18.33■□□□□ 0.52
PCDHGC3-204ENST00000617222 FGD1P98174 961 aa18.33■□□□□ 0.52
PCDHGC3-204ENST00000617222 SH3D19Q5HYK7 790 aa18.33■□□□□ 0.52
PCDHGC3-204ENST00000617222 Q6ZUG5 572 aa18.33■□□□□ 0.52
PCDHGC3-204ENST00000617222 PRRT2Q7Z6L0 340 aaPredicted RBP18.33■□□□□ 0.52
PCDHGC3-204ENST00000617222 ZIC5Q96T25 663 aa18.33■□□□□ 0.52
PCDHGC3-204ENST00000617222 VCPKMTQ9H867 229 aa18.33■□□□□ 0.52
PCDHGC3-204ENST00000617222 KAT14Q9H8E8 782 aa18.33■□□□□ 0.52
PCDHGC3-204ENST00000617222 LY9Q9HBG7 655 aa18.33■□□□□ 0.52
PCDHGC3-204ENST00000617222 EMILIN3Q9NT22 766 aa18.33■□□□□ 0.52
PCDHGC3-204ENST00000617222 PDRG1Q9NUG6 133 aa18.33■□□□□ 0.52
PCDHGC3-204ENST00000617222 TMOD4Q9NZQ9 345 aa18.33■□□□□ 0.52
PCDHGC3-204ENST00000617222 MTMR7Q9Y216 660 aa18.33■□□□□ 0.52
PCDHGC3-204ENST00000617222 WDR33Q9C0J8 1336 aaKnown RBP18.32■□□□□ 0.52
PCDHGC3-204ENST00000617222 F5H6K3 240 aa18.32■□□□□ 0.52
PCDHGC3-204ENST00000617222 CETPP11597 493 aa18.32■□□□□ 0.52
PCDHGC3-204ENST00000617222 NEK4P51957 841 aa18.32■□□□□ 0.52
PCDHGC3-204ENST00000617222 KIF23Q02241 960 aaPredicted RBP18.32■□□□□ 0.52
PCDHGC3-204ENST00000617222 KLRC3Q07444 240 aa18.32■□□□□ 0.52
PCDHGC3-204ENST00000617222 KIAA1755Q5JYT7 1200 aa18.32■□□□□ 0.52
PCDHGC3-204ENST00000617222 GADL1Q6ZQY3 521 aa18.32■□□□□ 0.52
PCDHGC3-204ENST00000617222 TMTC2Q8N394 836 aa18.32■□□□□ 0.52
PCDHGC3-204ENST00000617222 CHMP4CQ96CF2 233 aa18.32■□□□□ 0.52
PCDHGC3-204ENST00000617222 GOPCQ9HD26 462 aa18.32■□□□□ 0.52
PCDHGC3-204ENST00000617222 ATAD5Q96QE3 1844 aa18.31■□□□□ 0.52
PCDHGC3-204ENST00000617222 CCL15-CCL14A0A0B4J2E2 113 aa18.31■□□□□ 0.52
PCDHGC3-204ENST00000617222 MANSC4A6NHS7 340 aaPredicted RBP18.31■□□□□ 0.52
PCDHGC3-204ENST00000617222 NOGQ13253 232 aa18.31■□□□□ 0.52
PCDHGC3-204ENST00000617222 CCL15Q16663 113 aa18.31■□□□□ 0.52
PCDHGC3-204ENST00000617222 SLFN13Q68D06 897 aa18.31■□□□□ 0.52
PCDHGC3-204ENST00000617222 NFXL1Q6ZNB6 911 aa18.31■□□□□ 0.52
PCDHGC3-204ENST00000617222 FASTKD5Q7L8L6 764 aaKnown RBP18.31■□□□□ 0.52
PCDHGC3-204ENST00000617222 SPICE1Q8N0Z3 855 aa18.31■□□□□ 0.52
PCDHGC3-204ENST00000617222 PNMA1Q8ND90 353 aa18.31■□□□□ 0.52
PCDHGC3-204ENST00000617222 BRI3BPQ8WY22 251 aa18.31■□□□□ 0.52
PCDHGC3-204ENST00000617222 SYNPO2Q9UMS6 1093 aa18.31■□□□□ 0.52
PCDHGC3-204ENST00000617222 GREB1LQ9C091 1923 aaPredicted RBP18.31■□□□□ 0.52
PCDHGC3-204ENST00000617222 CCDC69A6NI79 296 aa18.3■□□□□ 0.52
PCDHGC3-204ENST00000617222 NDUFB10O96000 172 aa18.3■□□□□ 0.52
PCDHGC3-204ENST00000617222 LIFRP42702 1097 aa18.3■□□□□ 0.52
PCDHGC3-204ENST00000617222 MOGSQ13724 837 aa18.3■□□□□ 0.52
PCDHGC3-204ENST00000617222 GMCL1P1Q8NEA9 526 aa18.3■□□□□ 0.52
PCDHGC3-204ENST00000617222 C12orf42Q96LP6 360 aa18.3■□□□□ 0.52
PCDHGC3-204ENST00000617222 TESPA1A2RU30 521 aaPredicted RBP18.29■□□□□ 0.52
PCDHGC3-204ENST00000617222 RABEP1Q15276 862 aa18.29■□□□□ 0.52
PCDHGC3-204ENST00000617222 PROCA1Q8NCQ7 364 aaPredicted RBP18.29■□□□□ 0.52
PCDHGC3-204ENST00000617222 LPAR1Q92633 364 aa18.29■□□□□ 0.52
PCDHGC3-204ENST00000617222 BRF1Q92994 677 aa18.29■□□□□ 0.52
PCDHGC3-204ENST00000617222 LARP6Q9BRS8 491 aaKnown RBP18.29■□□□□ 0.52
PCDHGC3-204ENST00000617222 VCAM1P19320 739 aa18.28■□□□□ 0.52
PCDHGC3-204ENST00000617222 INHBEP58166 350 aa18.28■□□□□ 0.52
PCDHGC3-204ENST00000617222 APOBRQ0VD83 1088 aa18.28■□□□□ 0.52
PCDHGC3-204ENST00000617222 TOB2Q14106 344 aaPredicted RBP18.28■□□□□ 0.52
PCDHGC3-204ENST00000617222 TREML2Q5T2D2 321 aa18.28■□□□□ 0.52
PCDHGC3-204ENST00000617222 GPAT2Q6NUI2 795 aa18.28■□□□□ 0.52
PCDHGC3-204ENST00000617222 RASGRP2Q7LDG7 609 aa18.28■□□□□ 0.52
PCDHGC3-204ENST00000617222 CATIPQ7Z7H3 387 aa18.28■□□□□ 0.52
PCDHGC3-204ENST00000617222 SGMS1Q86VZ5 419 aa18.28■□□□□ 0.52
PCDHGC3-204ENST00000617222 FBXL16Q8N461 479 aa18.28■□□□□ 0.52
PCDHGC3-204ENST00000617222 NUP88Q99567 741 aaPredicted RBP18.28■□□□□ 0.52
PCDHGC3-204ENST00000617222 PTPN18Q99952 460 aa18.28■□□□□ 0.52
PCDHGC3-204ENST00000617222 AGXT2Q9BYV1 514 aa18.28■□□□□ 0.52
PCDHGC3-204ENST00000617222 ALDH8A1Q9H2A2 487 aaPredicted RBP18.28■□□□□ 0.52
PCDHGC3-204ENST00000617222 BRPF3Q9ULD4 1205 aa18.28■□□□□ 0.52
PCDHGC3-204ENST00000617222 SLC12A7Q9Y666 1083 aa18.28■□□□□ 0.52
PCDHGC3-204ENST00000617222 BTBD19C9JJ37 291 aa18.27■□□□□ 0.52
PCDHGC3-204ENST00000617222 MAP2K2P36507 400 aa18.27■□□□□ 0.52
PCDHGC3-204ENST00000617222 SLC1A4P43007 532 aa18.27■□□□□ 0.52
PCDHGC3-204ENST00000617222 SREBF2Q12772 1141 aa18.27■□□□□ 0.52
PCDHGC3-204ENST00000617222 FAM83BQ5T0W9 1011 aa18.27■□□□□ 0.52
PCDHGC3-204ENST00000617222 SYNE3Q6ZMZ3 975 aa18.27■□□□□ 0.52
PCDHGC3-204ENST00000617222 RAB11FIP4Q86YS3 637 aa18.27■□□□□ 0.52
PCDHGC3-204ENST00000617222 ZNF654Q8IZM8 581 aa18.27■□□□□ 0.52
PCDHGC3-204ENST00000617222 NUP133Q8WUM0 1156 aa18.27■□□□□ 0.52
PCDHGC3-204ENST00000617222 MYL10Q9BUA6 226 aa18.27■□□□□ 0.52
PCDHGC3-204ENST00000617222 RPAP3Q9H6T3 665 aaPredicted RBP18.27■□□□□ 0.52
PCDHGC3-204ENST00000617222 ISY1Q9ULR0 285 aaKnown RBP18.27■□□□□ 0.52
PCDHGC3-204ENST00000617222 NAP1L2Q9ULW6 460 aaPredicted RBP18.27■□□□□ 0.52
PCDHGC3-204ENST00000617222 AGTPBP1Q9UPW5 1226 aa18.27■□□□□ 0.52
PCDHGC3-204ENST00000617222 PHIPQ8WWQ0 1821 aa18.27■□□□□ 0.52
PCDHGC3-204ENST00000617222 KLF18A0A0U1RQI7 1052 aa18.26■□□□□ 0.51
PCDHGC3-204ENST00000617222 WDR46O15213 610 aaKnown RBP18.26■□□□□ 0.51
PCDHGC3-204ENST00000617222 PDHBP11177 359 aa18.26■□□□□ 0.51
PCDHGC3-204ENST00000617222 BMP3P12645 472 aa18.26■□□□□ 0.51
PCDHGC3-204ENST00000617222 TM4SF4P48230 202 aa18.26■□□□□ 0.51
PCDHGC3-204ENST00000617222 AK2P54819 239 aa18.26■□□□□ 0.51
PCDHGC3-204ENST00000617222 CCDC96Q2M329 555 aa18.26■□□□□ 0.51
PCDHGC3-204ENST00000617222 KCTD1Q719H9 257 aa18.26■□□□□ 0.51
PCDHGC3-204ENST00000617222 ANKRD23Q86SG2 305 aa18.26■□□□□ 0.51
PCDHGC3-204ENST00000617222 FAM43AQ8N2R8 423 aa18.26■□□□□ 0.51
PCDHGC3-204ENST00000617222 DCAF4Q8WV16 495 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms