RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 CCND3P30281 292 aaPredicted RBP17.76■□□□□ 0.43
UBXN1-218ENST00000616865 USP5P45974 858 aa17.76■□□□□ 0.43
UBXN1-218ENST00000616865 ZYXQ15942 572 aaKnown RBP17.76■□□□□ 0.43
UBXN1-218ENST00000616865 GPR153Q6NV75 609 aa17.76■□□□□ 0.43
UBXN1-218ENST00000616865 TMED8Q6PL24 325 aaPredicted RBP17.76■□□□□ 0.43
UBXN1-218ENST00000616865 CASC1Q6TDU7 716 aa17.76■□□□□ 0.43
UBXN1-218ENST00000616865 SERPINB13Q9UIV8 391 aa17.76■□□□□ 0.43
UBXN1-218ENST00000616865 RABGAP1Q9Y3P9 1069 aa17.76■□□□□ 0.43
UBXN1-218ENST00000616865 MYH7P12883 1935 aa17.75■□□□□ 0.43
UBXN1-218ENST00000616865 USP17L15C9J2P7 530 aa17.75■□□□□ 0.43
UBXN1-218ENST00000616865 USP17L13C9JLJ4 530 aa17.75■□□□□ 0.43
UBXN1-218ENST00000616865 USP17L11C9JVI0 530 aa17.75■□□□□ 0.43
UBXN1-218ENST00000616865 USP17L18D6R9N7 530 aa17.75■□□□□ 0.43
UBXN1-218ENST00000616865 USP17L22D6RA61 530 aa17.75■□□□□ 0.43
UBXN1-218ENST00000616865 USP17L17D6RBQ6 530 aa17.75■□□□□ 0.43
UBXN1-218ENST00000616865 USP17L19D6RCP7 530 aa17.75■□□□□ 0.43
UBXN1-218ENST00000616865 USP17L20D6RJB6 530 aa17.75■□□□□ 0.43
UBXN1-218ENST00000616865 CNMDO75829 334 aa17.75■□□□□ 0.43
UBXN1-218ENST00000616865 USP14P54578 494 aa17.75■□□□□ 0.43
UBXN1-218ENST00000616865 USP17L24Q0WX57 530 aa17.75■□□□□ 0.43
UBXN1-218ENST00000616865 LHX8Q68G74 356 aa17.75■□□□□ 0.43
UBXN1-218ENST00000616865 TICAM2Q86XR7 235 aa17.75■□□□□ 0.43
UBXN1-218ENST00000616865 TDHQ8IZJ6 230 aa17.75■□□□□ 0.43
UBXN1-218ENST00000616865 SLC17A8Q8NDX2 589 aa17.75■□□□□ 0.43
UBXN1-218ENST00000616865 CWC22Q9HCG8 908 aaKnown RBP17.75■□□□□ 0.43
UBXN1-218ENST00000616865 A0A0G2JMZ2 1700 aa17.75■□□□□ 0.43
UBXN1-218ENST00000616865 ZNF532Q9HCE3 1301 aa17.74■□□□□ 0.43
UBXN1-218ENST00000616865 VCAM1P19320 739 aa17.74■□□□□ 0.43
UBXN1-218ENST00000616865 ADD2P35612 726 aa17.74■□□□□ 0.43
UBXN1-218ENST00000616865 CCNA1P78396 465 aa17.74■□□□□ 0.43
UBXN1-218ENST00000616865 MAP2K5Q13163 448 aa17.74■□□□□ 0.43
UBXN1-218ENST00000616865 RAB3GAP1Q15042 981 aa17.74■□□□□ 0.43
UBXN1-218ENST00000616865 LRIT3Q3SXY7 679 aa17.74■□□□□ 0.43
UBXN1-218ENST00000616865 KIAA1683Q9H0B3 1180 aa17.74■□□□□ 0.43
UBXN1-218ENST00000616865 ZNF236Q9UL36 1845 aa17.74■□□□□ 0.43
UBXN1-218ENST00000616865 UBE3CQ15386 1083 aa17.73■□□□□ 0.43
UBXN1-218ENST00000616865 ABCB5Q2M3G0 1257 aa17.73■□□□□ 0.43
UBXN1-218ENST00000616865 CERKLQ49MI3 558 aaPredicted RBP17.73■□□□□ 0.43
UBXN1-218ENST00000616865 LBX2Q6XYB7 198 aa17.73■□□□□ 0.43
UBXN1-218ENST00000616865 CATSPERGQ6ZRH7 1159 aa17.73■□□□□ 0.43
UBXN1-218ENST00000616865 TTC6Q86TZ1 520 aa17.73■□□□□ 0.43
UBXN1-218ENST00000616865 RUFY2Q8WXA3 655 aa17.73■□□□□ 0.43
UBXN1-218ENST00000616865 CDC45O75419 566 aa17.72■□□□□ 0.43
UBXN1-218ENST00000616865 SHMT1P34896 483 aa17.72■□□□□ 0.43
UBXN1-218ENST00000616865 LRRC26Q2I0M4 334 aa17.72■□□□□ 0.43
UBXN1-218ENST00000616865 APPBP2Q92624 585 aa17.72■□□□□ 0.43
UBXN1-218ENST00000616865 UBE2OQ9C0C9 1292 aaKnown RBP17.72■□□□□ 0.43
UBXN1-218ENST00000616865 MYH8P13535 1937 aa17.71■□□□□ 0.43
UBXN1-218ENST00000616865 MAGEB6P1A0A0J9YX57 407 aa17.71■□□□□ 0.43
UBXN1-218ENST00000616865 SPDYE16A6NNV3 312 aaPredicted RBP17.71■□□□□ 0.43
UBXN1-218ENST00000616865 PTPREP23469 700 aa17.71■□□□□ 0.43
UBXN1-218ENST00000616865 NMIQ13287 307 aaPredicted RBP17.71■□□□□ 0.43
UBXN1-218ENST00000616865 WDR78Q5VTH9 848 aa17.71■□□□□ 0.43
UBXN1-218ENST00000616865 DEFB123Q8N688 67 aa17.71■□□□□ 0.43
UBXN1-218ENST00000616865 ACER1Q8TDN7 264 aa17.71■□□□□ 0.43
UBXN1-218ENST00000616865 RIOK1Q9BRS2 568 aaKnown RBP17.71■□□□□ 0.43
UBXN1-218ENST00000616865 CABP5Q9NP86 173 aa17.71■□□□□ 0.43
UBXN1-218ENST00000616865 FLRT1Q9NZU1 646 aa17.71■□□□□ 0.43
UBXN1-218ENST00000616865 BTBD7Q9P203 1132 aa17.71■□□□□ 0.43
UBXN1-218ENST00000616865 TCRBV5S4A2TA0A5A2 114 aa17.7■□□□□ 0.42
UBXN1-218ENST00000616865 SLC15A5A6NIM6 579 aa17.7■□□□□ 0.42
UBXN1-218ENST00000616865 CHMLP26374 656 aa17.7■□□□□ 0.42
UBXN1-218ENST00000616865 PLCD1P51178 756 aa17.7■□□□□ 0.42
UBXN1-218ENST00000616865 MFAP1P55081 439 aaKnown RBP17.7■□□□□ 0.42
UBXN1-218ENST00000616865 GRB14Q14449 540 aa17.7■□□□□ 0.42
UBXN1-218ENST00000616865 SLFNL1Q499Z3 407 aa17.7■□□□□ 0.42
UBXN1-218ENST00000616865 ZMYM1Q5SVZ6 1142 aa17.7■□□□□ 0.42
UBXN1-218ENST00000616865 MFSD14CQ5VZR4 134 aa17.7■□□□□ 0.42
UBXN1-218ENST00000616865 CWC27Q6UX04 472 aaKnown RBP17.7■□□□□ 0.42
UBXN1-218ENST00000616865 HELLSQ9NRZ9 838 aa17.7■□□□□ 0.42
UBXN1-218ENST00000616865 IVNS1ABPQ9Y6Y0 642 aa17.7■□□□□ 0.42
UBXN1-218ENST00000616865 RLFQ13129 1914 aa17.7■□□□□ 0.42
UBXN1-218ENST00000616865 LTBP2Q14767 1821 aa17.7■□□□□ 0.42
UBXN1-218ENST00000616865 DNAH12Q6ZR08 3092 aa17.69■□□□□ 0.42
UBXN1-218ENST00000616865 DLL1O00548 723 aa17.69■□□□□ 0.42
UBXN1-218ENST00000616865 HOXC6P09630 235 aa17.69■□□□□ 0.42
UBXN1-218ENST00000616865 GUCY1A2P33402 732 aa17.69■□□□□ 0.42
UBXN1-218ENST00000616865 Q7L0L9 218 aa17.69■□□□□ 0.42
UBXN1-218ENST00000616865 RPAP3Q9H6T3 665 aaPredicted RBP17.69■□□□□ 0.42
UBXN1-218ENST00000616865 DDX20Q9UHI6 824 aaKnown RBP17.69■□□□□ 0.42
UBXN1-218ENST00000616865 MSCO60682 206 aa17.68■□□□□ 0.42
UBXN1-218ENST00000616865 MBD4O95243 580 aa17.68■□□□□ 0.42
UBXN1-218ENST00000616865 CHGBP05060 677 aa17.68■□□□□ 0.42
UBXN1-218ENST00000616865 GABPAQ06546 454 aa17.68■□□□□ 0.42
UBXN1-218ENST00000616865 MCMDC2Q4G0Z9 681 aa17.68■□□□□ 0.42
UBXN1-218ENST00000616865 NPLOC4Q8TAT6 608 aa17.68■□□□□ 0.42
UBXN1-218ENST00000616865 FAM227BQ96M60 508 aa17.68■□□□□ 0.42
UBXN1-218ENST00000616865 PARP14Q460N5 1801 aa17.68■□□□□ 0.42
UBXN1-218ENST00000616865 A0A0D9SFI3 127 aa17.67■□□□□ 0.42
UBXN1-218ENST00000616865 POLR3DP05423 398 aaPredicted RBP17.67■□□□□ 0.42
UBXN1-218ENST00000616865 MDM2Q00987 491 aaPredicted RBP17.67■□□□□ 0.42
UBXN1-218ENST00000616865 ATP2B2Q01814 1243 aa17.67■□□□□ 0.42
UBXN1-218ENST00000616865 SEPT2Q15019 361 aa17.67■□□□□ 0.42
UBXN1-218ENST00000616865 LPAR1Q92633 364 aa17.67■□□□□ 0.42
UBXN1-218ENST00000616865 OSBP2Q969R2 916 aa17.67■□□□□ 0.42
UBXN1-218ENST00000616865 CRNKL1Q9BZJ0 848 aaKnown RBP17.67■□□□□ 0.42
UBXN1-218ENST00000616865 PUS7LQ9H0K6 701 aaKnown RBP17.67■□□□□ 0.42
UBXN1-218ENST00000616865 ARMT1Q9H993 441 aa17.67■□□□□ 0.42
UBXN1-218ENST00000616865 M0R2C6 588 aa17.66■□□□□ 0.42
UBXN1-218ENST00000616865 IGHA2P01877 340 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms