RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, human

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-223	ENST00000616010	MAP3K14	Q99558	947 aa		27.28	■■□□□ 1.96
CCND3-223	ENST00000616010	NYAP2	Q9P242	653 aa		27.28	■■□□□ 1.96
CCND3-223	ENST00000616010	TMTC3	Q6ZXV5	915 aa		27.27	■■□□□ 1.96
CCND3-223	ENST00000616010	KRT26	Q7Z3Y9	468 aa		27.27	■■□□□ 1.96
CCND3-223	ENST00000616010	SLC26A6	Q9BXS9	759 aa		27.27	■■□□□ 1.96
CCND3-223	ENST00000616010	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	27.27	■■□□□ 1.96
CCND3-223	ENST00000616010	MAD2L2	Q9UI95	211 aa		27.26	■■□□□ 1.95
CCND3-223	ENST00000616010	ZDHHC9	Q9Y397	364 aa		27.26	■■□□□ 1.95
CCND3-223	ENST00000616010	FOXD4L5	Q5VV16	416 aa	Predicted RBP	27.26	■■□□□ 1.95
CCND3-223	ENST00000616010	DLK2	Q6UY11	383 aa		27.26	■■□□□ 1.95
CCND3-223	ENST00000616010	PNMA8A	Q86V59	439 aa	Predicted RBP	27.26	■■□□□ 1.95
CCND3-223	ENST00000616010	SIAH1	Q8IUQ4	282 aa		27.26	■■□□□ 1.95
CCND3-223	ENST00000616010	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	27.26	■■□□□ 1.95
CCND3-223	ENST00000616010	ZNF341	Q9BYN7	854 aa		27.26	■■□□□ 1.95
CCND3-223	ENST00000616010	STK36	Q9NRP7	1315 aa		27.25	■■□□□ 1.95
CCND3-223	ENST00000616010	FMNL1	O95466	1100 aa	Predicted RBP	27.25	■■□□□ 1.95
CCND3-223	ENST00000616010	BRD1	O95696	1058 aa		27.25	■■□□□ 1.95
CCND3-223	ENST00000616010	FOSB	P53539	338 aa		27.25	■■□□□ 1.95
CCND3-223	ENST00000616010	SSRP1	Q08945	709 aa	Known RBP	27.25	■■□□□ 1.95
CCND3-223	ENST00000616010	NBPF11	Q86T75	865 aa		27.25	■■□□□ 1.95
CCND3-223	ENST00000616010	STAG2	Q8N3U4	1231 aa		27.25	■■□□□ 1.95
CCND3-223	ENST00000616010	FZD1	Q9UP38	647 aa		27.25	■■□□□ 1.95
CCND3-223	ENST00000616010	MYH6	P13533	1939 aa		27.24	■■□□□ 1.95
CCND3-223	ENST00000616010	VPS37C	A5D8V6	355 aa	Predicted RBP	27.24	■■□□□ 1.95
CCND3-223	ENST00000616010	ASNS	P08243	561 aa		27.24	■■□□□ 1.95
CCND3-223	ENST00000616010	PDHB	P11177	359 aa		27.24	■■□□□ 1.95
CCND3-223	ENST00000616010	SUPT20HL1	Q3ZLR7	823 aa		27.24	■■□□□ 1.95
CCND3-223	ENST00000616010	TRIM22	Q8IYM9	498 aa		27.24	■■□□□ 1.95
CCND3-223	ENST00000616010	WDR33	Q9C0J8	1336 aa	Known RBP	27.24	■■□□□ 1.95
CCND3-223	ENST00000616010	DOCK1	Q14185	1865 aa		27.24	■■□□□ 1.95
CCND3-223	ENST00000616010	USP17L5	A8MUK1	530 aa		27.24	■■□□□ 1.95
CCND3-223	ENST00000616010	PARP1	P09874	1014 aa	Known RBP	27.24	■■□□□ 1.95
CCND3-223	ENST00000616010	GOLGA8H	P0CJ92	632 aa		27.24	■■□□□ 1.95
CCND3-223	ENST00000616010	USP17L2	Q6R6M4	530 aa		27.24	■■□□□ 1.95
CCND3-223	ENST00000616010	MKL1	Q969V6	931 aa		27.24	■■□□□ 1.95
CCND3-223	ENST00000616010	FUT2	Q10981	343 aa		27.23	■■□□□ 1.95
CCND3-223	ENST00000616010	SRBD1	Q8N5C6	995 aa	Known RBP	27.23	■■□□□ 1.95
CCND3-223	ENST00000616010	CNTNAP5	Q8WYK1	1306 aa		27.23	■■□□□ 1.95
CCND3-223	ENST00000616010	UBE2Q2L	H0YL09	131 aa		27.23	■■□□□ 1.95
CCND3-223	ENST00000616010	TNPO1	Q92973	898 aa	Known RBP	27.23	■■□□□ 1.95
CCND3-223	ENST00000616010	WRNIP1	Q96S55	665 aa		27.23	■■□□□ 1.95
CCND3-223	ENST00000616010	MTMR6	Q9Y217	621 aa		27.23	■■□□□ 1.95
CCND3-223	ENST00000616010	PALM3	A6NDB9	673 aa	Predicted RBP	27.22	■■□□□ 1.95
CCND3-223	ENST00000616010	RAD21	O60216	631 aa		27.22	■■□□□ 1.95
CCND3-223	ENST00000616010	INPP5B	P32019	993 aa		27.22	■■□□□ 1.95
CCND3-223	ENST00000616010	ARHGEF10L	Q9HCE6	1279 aa		27.22	■■□□□ 1.95
CCND3-223	ENST00000616010	CTNND1	O60716	968 aa	Known RBP	27.21	■■□□□ 1.95
CCND3-223	ENST00000616010	SNHG28	P0DPA3	235 aa		27.21	■■□□□ 1.95
CCND3-223	ENST00000616010	GNAQ	P50148	359 aa		27.21	■■□□□ 1.95
CCND3-223	ENST00000616010	CDC37L1	Q7L3B6	337 aa		27.21	■■□□□ 1.95
CCND3-223	ENST00000616010	AIFM3	Q96NN9	605 aa		27.21	■■□□□ 1.95
CCND3-223	ENST00000616010	RNF26	Q9BY78	433 aa	Predicted RBP	27.21	■■□□□ 1.95
CCND3-223	ENST00000616010	FRMPD2	Q68DX3	1309 aa	Predicted RBP	27.21	■■□□□ 1.95
CCND3-223	ENST00000616010		A0A1W2PRG0	241 aa		27.21	■■□□□ 1.95
CCND3-223	ENST00000616010		H3BQV1	296 aa		27.21	■■□□□ 1.95
CCND3-223	ENST00000616010	POTEI	P0CG38	1075 aa		27.21	■■□□□ 1.95
CCND3-223	ENST00000616010	POTEJ	P0CG39	1038 aa		27.21	■■□□□ 1.95
CCND3-223	ENST00000616010	IFFO2	Q5TF58	517 aa		27.21	■■□□□ 1.95
CCND3-223	ENST00000616010	CCDC84	Q86UT8	332 aa	Predicted RBP	27.21	■■□□□ 1.95
CCND3-223	ENST00000616010	USP48	Q86UV5	1035 aa		27.21	■■□□□ 1.95
CCND3-223	ENST00000616010	ZSCAN22	P10073	491 aa	Predicted RBP	27.2	■■□□□ 1.94
CCND3-223	ENST00000616010	ECE1	P42892	770 aa		27.2	■■□□□ 1.94
CCND3-223	ENST00000616010	ALG1	Q9BT22	464 aa		27.2	■■□□□ 1.94
CCND3-223	ENST00000616010	RRAGC	Q9HB90	399 aa		27.2	■■□□□ 1.94
CCND3-223	ENST00000616010	ZNF112	Q9UJU3	913 aa		27.2	■■□□□ 1.94
CCND3-223	ENST00000616010	BAZ2B	Q9UIF8	2168 aa	Known RBP	27.2	■■□□□ 1.94
CCND3-223	ENST00000616010	KLRF2	D3W0D1	207 aa		27.19	■■□□□ 1.94
CCND3-223	ENST00000616010	DEXI	O95424	95 aa		27.19	■■□□□ 1.94
CCND3-223	ENST00000616010	PDIA4	P13667	645 aa	Known RBP	27.19	■■□□□ 1.94
CCND3-223	ENST00000616010	AKAP17A	Q02040	695 aa	Known RBP	27.19	■■□□□ 1.94
CCND3-223	ENST00000616010	PRKG1	Q13976	671 aa		27.19	■■□□□ 1.94
CCND3-223	ENST00000616010	ASPRV1	Q53RT3	343 aa		27.19	■■□□□ 1.94
CCND3-223	ENST00000616010	ACER1	Q8TDN7	264 aa		27.19	■■□□□ 1.94
CCND3-223	ENST00000616010	GLIS2	Q9BZE0	524 aa	Predicted RBP	27.19	■■□□□ 1.94
CCND3-223	ENST00000616010	CLEC11A	Q9Y240	323 aa		27.19	■■□□□ 1.94
CCND3-223	ENST00000616010	hCG_1642624	A0A1W2PR95	340 aa		27.19	■■□□□ 1.94
CCND3-223	ENST00000616010	CCDC96	Q2M329	555 aa		27.19	■■□□□ 1.94
CCND3-223	ENST00000616010	C8orf76	Q96K31	380 aa		27.19	■■□□□ 1.94
CCND3-223	ENST00000616010	VEGFA	P15692	232 aa	Predicted RBP	27.18	■■□□□ 1.94
CCND3-223	ENST00000616010	GUCY1B3	Q02153	619 aa		27.18	■■□□□ 1.94
CCND3-223	ENST00000616010	GMCL1P1	Q8NEA9	526 aa		27.18	■■□□□ 1.94
CCND3-223	ENST00000616010	WASF1	Q92558	559 aa		27.18	■■□□□ 1.94
CCND3-223	ENST00000616010	ZKSCAN4	Q969J2	545 aa	Predicted RBP	27.18	■■□□□ 1.94
CCND3-223	ENST00000616010	KLRG1	Q96E93	195 aa		27.18	■■□□□ 1.94
CCND3-223	ENST00000616010	CDCA5	Q96FF9	252 aa		27.18	■■□□□ 1.94
CCND3-223	ENST00000616010	GINM1	Q9NU53	330 aa		27.18	■■□□□ 1.94
CCND3-223	ENST00000616010	PRPF3	O43395	683 aa	Known RBP	27.17	■■□□□ 1.94
CCND3-223	ENST00000616010	ZNF543	Q08ER8	600 aa		27.17	■■□□□ 1.94
CCND3-223	ENST00000616010	SLFN13	Q68D06	897 aa		27.17	■■□□□ 1.94
CCND3-223	ENST00000616010	LZTS2	Q9BRK4	669 aa		27.17	■■□□□ 1.94
CCND3-223	ENST00000616010	CPVL	Q9H3G5	476 aa		27.17	■■□□□ 1.94
CCND3-223	ENST00000616010	GJB4	Q9NTQ9	266 aa		27.17	■■□□□ 1.94
CCND3-223	ENST00000616010	SYNPO2	Q9UMS6	1093 aa		27.17	■■□□□ 1.94
CCND3-223	ENST00000616010		V9GY48	417 aa	Predicted RBP	27.17	■■□□□ 1.94
CCND3-223	ENST00000616010		F5H6K3	240 aa		27.17	■■□□□ 1.94
CCND3-223	ENST00000616010	KLRC3	Q07444	240 aa		27.17	■■□□□ 1.94
CCND3-223	ENST00000616010	SCYL3	Q8IZE3	742 aa		27.17	■■□□□ 1.94
CCND3-223	ENST00000616010	PIBF1	Q8WXW3	757 aa		27.17	■■□□□ 1.94
CCND3-223	ENST00000616010	ISY1	Q9ULR0	285 aa	Known RBP	27.17	■■□□□ 1.94
CCND3-223	ENST00000616010	TMX2	Q9Y320	296 aa		27.17	■■□□□ 1.94

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms