RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 RGS22Q8NE09 1264 aa10.15□□□□□ -0.78
SPTBN1-207ENST00000615901 LEMD3Q9Y2U8 911 aa10.15□□□□□ -0.78
SPTBN1-207ENST00000615901 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.15□□□□□ -0.785e-7■□□□□ 9.4
SPTBN1-207ENST00000615901 USP40Q9NVE5 1235 aa10.15□□□□□ -0.78
SPTBN1-207ENST00000615901 PKD2L1Q9P0L9 805 aa10.15□□□□□ -0.78
SPTBN1-207ENST00000615901 MTMR6Q9Y217 621 aa10.15□□□□□ -0.78
SPTBN1-207ENST00000615901 SMCO2A6NFE2 343 aa10.15□□□□□ -0.79
SPTBN1-207ENST00000615901 NOP56O00567 594 aaKnown RBP10.15□□□□□ -0.79
SPTBN1-207ENST00000615901 N4BP1O75113 896 aaKnown RBP10.15□□□□□ -0.79
SPTBN1-207ENST00000615901 DLGAP5Q15398 846 aa10.15□□□□□ -0.79
SPTBN1-207ENST00000615901 FAM76AQ8TAV0 307 aa10.15□□□□□ -0.79
SPTBN1-207ENST00000615901 MAK16Q9BXY0 300 aaKnown RBP10.15□□□□□ -0.79
SPTBN1-207ENST00000615901 MRPL44Q9H9J2 332 aaKnown RBP10.15□□□□□ -0.79
SPTBN1-207ENST00000615901 DIP2AQ14689 1571 aa10.15□□□□□ -0.79
SPTBN1-207ENST00000615901 BCRP11274 1271 aa10.15□□□□□ -0.79
SPTBN1-207ENST00000615901 KRT5P13647 590 aa10.15□□□□□ -0.79
SPTBN1-207ENST00000615901 BCAMP50895 628 aa10.15□□□□□ -0.79
SPTBN1-207ENST00000615901 DCAF15Q66K64 600 aa10.15□□□□□ -0.79
SPTBN1-207ENST00000615901 CROCCP2Q86T23 111 aa10.15□□□□□ -0.79
SPTBN1-207ENST00000615901 PALD1Q9ULE6 856 aa10.15□□□□□ -0.79
SPTBN1-207ENST00000615901 KIDINS220Q9ULH0 1771 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 MYH10P35580 1976 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 ACTN4O43707 911 aaKnown RBP10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 NBPF11Q86T75 865 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 AZI2Q9H6S1 392 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 AS3MTQ9HBK9 375 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 PLEKHG2Q9H7P9 1386 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 PXDNLA1KZ92 1463 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 KIAA1468Q9P260 1216 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 POLR3EQ9NVU0 708 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 PPIP5K2O43314 1243 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 TNFAIP3P21580 790 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 GJC1P36383 396 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 TRPC3Q13507 836 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 OTUD7BQ6GQQ9 843 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 CNKSR1Q969H4 720 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 OGFRQ9NZT2 677 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 GAS7O60861 476 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.14□□□□□ -0.791e-6■■■■□ 20.8
SPTBN1-207ENST00000615901 USP31Q70CQ4 1352 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 ABCC12Q96J65 1359 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 CCDC169A6NNP5 214 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 GTPBP6O43824 516 aaPredicted RBP10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 HERC4Q5GLZ8 1057 aaPredicted RBP10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 C8orf74Q6P047 294 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 WWC3Q9ULE0 1092 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 SPOPO43791 374 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 ALDH3A1P30838 453 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 LONP1P36776 959 aaKnown RBP10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 LRRC24Q50LG9 513 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 MRFAP1L1Q96HT8 127 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 PRDM10Q9NQV6 1147 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 RTEL1Q9NZ71 1219 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 OR52Z1P0C646 297 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 PNOCQ13519 176 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 MCF2L2Q86YR7 1114 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 IFT20Q8IY31 132 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 PNMA1Q8ND90 353 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 GREM2Q9H772 168 aa10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 TRPC5Q9UL62 973 aaPredicted RBP10.14□□□□□ -0.79
SPTBN1-207ENST00000615901 FGAP02671 866 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 BTDP43251 543 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 NLRX1Q86UT6 975 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 NLGN1Q8N2Q7 840 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 KCNJ18B7U540 433 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 GYG1P46976 350 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 KCNJ12Q14500 433 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 MSL1Q68DK7 614 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 FOXP1Q9H334 677 aaPredicted RBP10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 GJA3Q9Y6H8 435 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 CNTRLQ7Z7A1 2325 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 M0R2C6 588 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 PLCB3Q01970 1234 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 USP17L12C9JPN9 530 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 USP17L21D6R901 530 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 RHOXF2BP0C7M4 288 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 TIGD1Q96MW7 591 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 RHOXF2Q9BQY4 288 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 PSTPIP2Q9H939 334 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 NEURL4Q96JN8 1562 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 EVCP57679 992 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 KRT26Q7Z3Y9 468 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 CCDC114Q96M63 670 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 RNF26Q9BY78 433 aaPredicted RBP10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 UTP11Q9Y3A2 253 aaKnown RBP10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 SOS2Q07890 1332 aaPredicted RBP10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 ASPRV1Q53RT3 343 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 AGLP35573 1532 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 PPEF1O14829 653 aaPredicted RBP10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 CDC25BP30305 580 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 CFAP58Q5T655 872 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 NEK8Q86SG6 692 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 MYCT1Q8N699 235 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 VPS16Q9H269 839 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 MRPL11Q9Y3B7 192 aaKnown RBP10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 IVNS1ABPQ9Y6Y0 642 aa10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 FMNL1O95466 1100 aaPredicted RBP10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 IFIH1Q9BYX4 1025 aaKnown RBP10.13□□□□□ -0.79
SPTBN1-207ENST00000615901 PDIA3P30101 505 aaKnown RBP10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 MORC3Q14149 939 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms