RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 CPDO75976 1380 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 SMCO2A6NFE2 343 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 TMCO5BA8MYB1 307 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 ATP2A1O14983 1001 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 STK10O94804 968 aaKnown RBP10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 GRPEL1Q9HAV7 217 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 PKD2L1Q9P0L9 805 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 TMEM232C9JQI7 657 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 ZBTB7AO95365 584 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 TNNC2P02585 160 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 GCFC2P16383 781 aaKnown RBP10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 ECE1P42892 770 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 STAT2P52630 851 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 AXDND1Q5T1B0 1012 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 SUSD4Q5VX71 490 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 NECAB1Q8N987 351 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 RTN4Q9NQC3 1192 aaKnown RBP10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 TESPA1A2RU30 521 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 MAK16Q9BXY0 300 aaKnown RBP10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 CSRNP2Q9H175 543 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 RGL2O15211 777 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 TGFB2P61812 414 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 ABI1Q8IZP0 508 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 SNX29Q8TEQ0 813 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 FAM81BQ96LP2 452 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 SERPINB13Q9UIV8 391 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 TPCN1Q9ULQ1 816 aa10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 BMP3P12645 472 aa10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 FERP16591 822 aa10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 ZNF654Q8IZM8 581 aa10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 USP17L5A8MUK1 530 aa10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 H7C1W4 665 aa10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 RAD17O75943 681 aa10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 TUBB4BP68371 445 aa10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 MTIF3Q9H2K0 278 aaKnown RBP10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 CETN3O15182 167 aa10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 AKR1B10O60218 316 aa10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 UBXN2AP68543 259 aa10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 SYDE2Q5VT97 1194 aa10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 WDR11Q9BZH6 1224 aa10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 NACA2Q9H009 215 aa10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 IKBKGQ9Y6K9 419 aa10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 TECPR2O15040 1411 aa10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 CLRN2A0PK11 232 aa10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 ZSCAN20P17040 1043 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 CRKP46108 304 aa10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 PNMA1Q8ND90 353 aa10.88□□□□□ -0.67
TNFRSF9-204ENST00000615230 KIAA0753Q2KHM9 967 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 USP26Q9BXU7 913 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 ZNRF3Q9ULT6 936 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 E7EWF7 191 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 ZNF174Q15697 407 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 TKFCQ3LXA3 575 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 PPP1R2P3Q6NXS1 205 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 ZNF526Q8TF50 670 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 USP44Q9H0E7 712 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 RFX7Q2KHR2 1363 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 SYCE3A1L190 88 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 RCSD1Q6JBY9 416 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 METTL23Q86XA0 190 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 RPS6KC1Q96S38 1066 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 NUP58Q9BVL2 599 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 CYP27B1O15528 508 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 BLIDQ8IZY5 108 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 RNF34Q969K3 372 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 TFIP11Q9UBB9 837 aaKnown RBP10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 ATP2A2P16615 1042 aaKnown RBP10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 JAKMIP2Q96AA8 810 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 FAM167AQ96KS9 214 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 TTC14Q96N46 770 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 MTFR1LQ9H019 292 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 VPS33BQ9H267 617 aa10.87□□□□□ -0.67
TNFRSF9-204ENST00000615230 TXKP42681 527 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 CABP7Q86V35 215 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 PLA2G4DQ86XP0 818 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 MYCT1Q8N699 235 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 KLHDC4Q8TBB5 520 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 NUCKS1Q9H1E3 243 aaKnown RBP10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 GPBP1L1Q9HC44 474 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 SLIT1O75093 1534 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 ADAMTS13Q76LX8 1427 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 VWA3AA6NCI4 1184 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 SLC15A2Q16348 729 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 FSD2A1L4K1 749 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 ANO1Q5XXA6 986 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 ZFYVE28Q9HCC9 887 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 NOC2LQ9Y3T9 749 aaKnown RBP10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 TLR3O15455 904 aaKnown RBP10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 BCRP11274 1271 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 DMP1Q13316 513 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 KCNV1Q6PIU1 500 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 CCDC129Q6ZRS4 1044 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 IQSEC2Q5JU85 1478 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 IQGAP1P46940 1657 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 MACROD2A1Z1Q3 448 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 TACC1O75410 805 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 TRAPPC10P48553 1259 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 POSTNQ15063 836 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 PPP1R18Q6NYC8 613 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms