RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 USP17L19D6RCP7 530 aa19.87■□□□□ 0.77
CBWD3-211ENST00000615061 USP17L20D6RJB6 530 aa19.87■□□□□ 0.77
CBWD3-211ENST00000615061 TFAP4Q01664 338 aa19.87■□□□□ 0.77
CBWD3-211ENST00000615061 USP17L24Q0WX57 530 aa19.87■□□□□ 0.77
CBWD3-211ENST00000615061 FAM110CQ1W6H9 321 aa19.87■□□□□ 0.77
CBWD3-211ENST00000615061 CATSPERGQ6ZRH7 1159 aa19.87■□□□□ 0.77
CBWD3-211ENST00000615061 VCPKMTQ9H867 229 aa19.87■□□□□ 0.77
CBWD3-211ENST00000615061 PTPN22Q9Y2R2 807 aa19.87■□□□□ 0.77
CBWD3-211ENST00000615061 LAMA4Q16363 1823 aa19.87■□□□□ 0.77
CBWD3-211ENST00000615061 TSPY3P0CV98 308 aa19.86■□□□□ 0.77
CBWD3-211ENST00000615061 TSPY8P0CW00 308 aa19.86■□□□□ 0.77
CBWD3-211ENST00000615061 GCLCP48506 637 aaPredicted RBP19.86■□□□□ 0.77
CBWD3-211ENST00000615061 NKX2-3Q8TAU0 364 aa19.86■□□□□ 0.77
CBWD3-211ENST00000615061 FMNL1O95466 1100 aaPredicted RBP19.85■□□□□ 0.77
CBWD3-211ENST00000615061 TBC1D10CQ8IV04 446 aa19.85■□□□□ 0.77
CBWD3-211ENST00000615061 NEDD1Q8NHV4 660 aa19.85■□□□□ 0.77
CBWD3-211ENST00000615061 SH2D4AQ9H788 454 aa19.85■□□□□ 0.77
CBWD3-211ENST00000615061 PARP14Q460N5 1801 aa19.85■□□□□ 0.77
CBWD3-211ENST00000615061 PLIN4Q96Q06 1357 aa19.85■□□□□ 0.77
CBWD3-211ENST00000615061 CCDC85CA6NKD9 419 aa19.85■□□□□ 0.77
CBWD3-211ENST00000615061 RAD21O60216 631 aa19.85■□□□□ 0.77
CBWD3-211ENST00000615061 PAGR1Q9BTK6 254 aa19.85■□□□□ 0.77
CBWD3-211ENST00000615061 DSCC1Q9BVC3 393 aa19.85■□□□□ 0.77
CBWD3-211ENST00000615061 TOMM22Q9NS69 142 aa19.85■□□□□ 0.77
CBWD3-211ENST00000615061 MTMR4Q9NYA4 1195 aa19.85■□□□□ 0.77
CBWD3-211ENST00000615061 RBPJLQ9UBG7 517 aa19.85■□□□□ 0.77
CBWD3-211ENST00000615061 CLIP2Q9UDT6 1046 aa19.85■□□□□ 0.77
CBWD3-211ENST00000615061 PTCH2Q9Y6C5 1203 aa19.85■□□□□ 0.77
CBWD3-211ENST00000615061 RANBP6O60518 1105 aaKnown RBP19.84■□□□□ 0.77
CBWD3-211ENST00000615061 NMT2O60551 498 aa19.84■□□□□ 0.77
CBWD3-211ENST00000615061 FGRP09769 529 aa19.84■□□□□ 0.77
CBWD3-211ENST00000615061 RRP12Q5JTH9 1297 aaKnown RBP19.84■□□□□ 0.77
CBWD3-211ENST00000615061 TANGO6Q9C0B7 1094 aa19.84■□□□□ 0.77
CBWD3-211ENST00000615061 NYAP2Q9P242 653 aa19.84■□□□□ 0.77
CBWD3-211ENST00000615061 MKI67P46013 3256 aaKnown RBP19.84■□□□□ 0.77
CBWD3-211ENST00000615061 TSPY2A6NKD2 308 aa19.83■□□□□ 0.77
CBWD3-211ENST00000615061 FCGRTP55899 365 aa19.83■□□□□ 0.77
CBWD3-211ENST00000615061 ARHGEF6Q15052 776 aa19.83■□□□□ 0.77
CBWD3-211ENST00000615061 Q3C1V9 767 aa19.83■□□□□ 0.77
CBWD3-211ENST00000615061 LRRC47Q8N1G4 583 aaKnown RBP19.83■□□□□ 0.77
CBWD3-211ENST00000615061 LPAR1Q92633 364 aa19.83■□□□□ 0.77
CBWD3-211ENST00000615061 IL17RBQ9NRM6 502 aa19.83■□□□□ 0.77
CBWD3-211ENST00000615061 MORF4L1Q9UBU8 362 aa19.83■□□□□ 0.77
CBWD3-211ENST00000615061 RAD50Q92878 1312 aa19.83■□□□□ 0.77
CBWD3-211ENST00000615061 SPDYE16A6NNV3 312 aaPredicted RBP19.83■□□□□ 0.76
CBWD3-211ENST00000615061 ORC4O43929 436 aa19.83■□□□□ 0.76
CBWD3-211ENST00000615061 NUP88Q99567 741 aaPredicted RBP19.83■□□□□ 0.76
CBWD3-211ENST00000615061 SGSM2O43147 1006 aa19.82■□□□□ 0.76
CBWD3-211ENST00000615061 CNMDO75829 334 aa19.82■□□□□ 0.76
CBWD3-211ENST00000615061 PTH1RQ03431 593 aa19.82■□□□□ 0.76
CBWD3-211ENST00000615061 PRKCZQ05513 592 aa19.82■□□□□ 0.76
CBWD3-211ENST00000615061 AKNAD1Q5T1N1 836 aa19.82■□□□□ 0.76
CBWD3-211ENST00000615061 RUFY2Q8WXA3 655 aa19.82■□□□□ 0.76
CBWD3-211ENST00000615061 GOPCQ9HD26 462 aa19.82■□□□□ 0.76
CBWD3-211ENST00000615061 SRRDQ9UH36 339 aa19.82■□□□□ 0.76
CBWD3-211ENST00000615061 GABRQQ9UN88 632 aa19.82■□□□□ 0.76
CBWD3-211ENST00000615061 NEDD4P46934 1319 aa19.82■□□□□ 0.76
CBWD3-211ENST00000615061 F5H6K3 240 aa19.81■□□□□ 0.76
CBWD3-211ENST00000615061 ZNF213O14771 459 aa19.81■□□□□ 0.76
CBWD3-211ENST00000615061 TNPO2O14787 897 aaKnown RBP19.81■□□□□ 0.76
CBWD3-211ENST00000615061 TTLL1O95922 423 aa19.81■□□□□ 0.76
CBWD3-211ENST00000615061 ERVK-9P63128 1117 aa19.81■□□□□ 0.76
CBWD3-211ENST00000615061 ERVK-24P63145 666 aa19.81■□□□□ 0.76
CBWD3-211ENST00000615061 KLRC3Q07444 240 aa19.81■□□□□ 0.76
CBWD3-211ENST00000615061 BMP2KLQ5H9B9 411 aa19.81■□□□□ 0.76
CBWD3-211ENST00000615061 SAMD1Q6SPF0 538 aaPredicted RBP19.81■□□□□ 0.76
CBWD3-211ENST00000615061 GPRC5AQ8NFJ5 357 aa19.81■□□□□ 0.76
CBWD3-211ENST00000615061 STAG1Q8WVM7 1258 aa19.81■□□□□ 0.76
CBWD3-211ENST00000615061 FBXO28Q9NVF7 368 aa19.81■□□□□ 0.76
CBWD3-211ENST00000615061 BTBD7Q9P203 1132 aa19.81■□□□□ 0.76
CBWD3-211ENST00000615061 COL11A1P12107 1806 aaPredicted RBP19.81■□□□□ 0.76
CBWD3-211ENST00000615061 WDR46O15213 610 aaKnown RBP19.8■□□□□ 0.76
CBWD3-211ENST00000615061 FLOT1O75955 427 aa19.8■□□□□ 0.76
CBWD3-211ENST00000615061 NDUFB10O96000 172 aa19.8■□□□□ 0.76
CBWD3-211ENST00000615061 GNRH1P01148 92 aa19.8■□□□□ 0.76
CBWD3-211ENST00000615061 COG2Q14746 738 aa19.8■□□□□ 0.76
CBWD3-211ENST00000615061 FAM83BQ5T0W9 1011 aa19.8■□□□□ 0.76
CBWD3-211ENST00000615061 MFSD6Q6ZSS7 791 aa19.8■□□□□ 0.76
CBWD3-211ENST00000615061 MKL1Q969V6 931 aa19.8■□□□□ 0.76
CBWD3-211ENST00000615061 CHMP4CQ96CF2 233 aa19.8■□□□□ 0.76
CBWD3-211ENST00000615061 PORCNQ9H237 461 aa19.8■□□□□ 0.76
CBWD3-211ENST00000615061 STX8Q9UNK0 236 aa19.8■□□□□ 0.76
CBWD3-211ENST00000615061 MYPNQ86TC9 1320 aa19.8■□□□□ 0.76
CBWD3-211ENST00000615061 A0A0G2JMZ2 1700 aa19.79■□□□□ 0.76
CBWD3-211ENST00000615061 LBX2Q6XYB7 198 aa19.79■□□□□ 0.76
CBWD3-211ENST00000615061 ATG4CQ96DT6 458 aa19.79■□□□□ 0.76
CBWD3-211ENST00000615061 PPP4R2Q9NY27 417 aa19.79■□□□□ 0.76
CBWD3-211ENST00000615061 RABGAP1Q9Y3P9 1069 aa19.79■□□□□ 0.76
CBWD3-211ENST00000615061 PLXNB2O15031 1838 aa19.79■□□□□ 0.76
CBWD3-211ENST00000615061 IMMTQ16891 758 aaKnown RBP19.78■□□□□ 0.76
CBWD3-211ENST00000615061 RASGRP2Q7LDG7 609 aa19.78■□□□□ 0.76
CBWD3-211ENST00000615061 SH3TC2Q8TF17 1288 aa19.78■□□□□ 0.76
CBWD3-211ENST00000615061 GTF3C2Q8WUA4 911 aaPredicted RBP19.78■□□□□ 0.76
CBWD3-211ENST00000615061 HOXD10P28358 340 aa19.78■□□□□ 0.76
CBWD3-211ENST00000615061 DSG3P32926 999 aa19.78■□□□□ 0.76
CBWD3-211ENST00000615061 FLT3LGP49771 235 aa19.78■□□□□ 0.76
CBWD3-211ENST00000615061 RNF41Q9H4P4 317 aaPredicted RBP19.78■□□□□ 0.76
CBWD3-211ENST00000615061 HOXC10Q9NYD6 342 aa19.78■□□□□ 0.76
CBWD3-211ENST00000615061 CTNNA3Q9UI47 895 aa19.78■□□□□ 0.76
CBWD3-211ENST00000615061 SLC9C1Q4G0N8 1177 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms