RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 KRT83P78385 493 aa14.12□□□□□ -0.15
MSH6-213ENST00000614496 REXO1L1PQ8IX06 675 aa14.12□□□□□ -0.15
MSH6-213ENST00000614496 NAA15Q9BXJ9 866 aaKnown RBP14.12□□□□□ -0.15
MSH6-213ENST00000614496 L2HGDHQ9H9P8 463 aa14.12□□□□□ -0.15
MSH6-213ENST00000614496 PARP3Q9Y6F1 533 aa14.12□□□□□ -0.15
MSH6-213ENST00000614496 SALL1Q9NSC2 1324 aa14.11□□□□□ -0.15
MSH6-213ENST00000614496 MCM3P25205 808 aa14.11□□□□□ -0.15
MSH6-213ENST00000614496 CALML3P27482 149 aa14.11□□□□□ -0.15
MSH6-213ENST00000614496 COPB1P53618 953 aaKnown RBP14.11□□□□□ -0.15
MSH6-213ENST00000614496 FOXP4Q8IVH2 680 aaPredicted RBP14.11□□□□□ -0.15
MSH6-213ENST00000614496 MRPL44Q9H9J2 332 aaKnown RBP14.11□□□□□ -0.15
MSH6-213ENST00000614496 CHRNDQ07001 517 aa14.11□□□□□ -0.15
MSH6-213ENST00000614496 PDE4DQ08499 809 aa14.11□□□□□ -0.15
MSH6-213ENST00000614496 IKQ13123 557 aaPredicted RBP14.11□□□□□ -0.15
MSH6-213ENST00000614496 PTPAQ15257 358 aa14.11□□□□□ -0.15
MSH6-213ENST00000614496 NCAPH2Q6IBW4 605 aa14.11□□□□□ -0.15
MSH6-213ENST00000614496 JAKMIP2Q96AA8 810 aa14.11□□□□□ -0.15
MSH6-213ENST00000614496 CALML4Q96GE6 196 aa14.11□□□□□ -0.15
MSH6-213ENST00000614496 TC2NQ8N9U0 490 aa14.11□□□□□ -0.15
MSH6-213ENST00000614496 MYO6Q9UM54 1294 aa14.11□□□□□ -0.15
MSH6-213ENST00000614496 CPDO75976 1380 aa14.11□□□□□ -0.15
MSH6-213ENST00000614496 GSG1L2A8MUP6 293 aa14.1□□□□□ -0.15
MSH6-213ENST00000614496 ST5P78524 1137 aa14.1□□□□□ -0.15
MSH6-213ENST00000614496 CKAP4Q07065 602 aaKnown RBP14.1□□□□□ -0.15
MSH6-213ENST00000614496 FBXO2Q9UK22 296 aaPredicted RBP14.1□□□□□ -0.15
MSH6-213ENST00000614496 FAN1Q9Y2M0 1017 aa14.1□□□□□ -0.15
MSH6-213ENST00000614496 EPN1Q9Y6I3 576 aaPredicted RBP14.1□□□□□ -0.15
MSH6-213ENST00000614496 CCDC40Q4G0X9 1142 aa14.1□□□□□ -0.15
MSH6-213ENST00000614496 NOC4LQ9BVI4 516 aaKnown RBP14.1□□□□□ -0.15
MSH6-213ENST00000614496 EHBP1Q8NDI1 1231 aa14.1□□□□□ -0.15
MSH6-213ENST00000614496 OR8K1Q8NGG5 319 aa14.1□□□□□ -0.15
MSH6-213ENST00000614496 GSDMAQ96QA5 445 aa14.1□□□□□ -0.15
MSH6-213ENST00000614496 RNF26Q9BY78 433 aaPredicted RBP14.1□□□□□ -0.15
MSH6-213ENST00000614496 FAM107BQ9H098 131 aa14.1□□□□□ -0.15
MSH6-213ENST00000614496 ABCB6Q9NP58 842 aa14.1□□□□□ -0.15
MSH6-213ENST00000614496 GDAQ9Y2T3 454 aa14.1□□□□□ -0.15
MSH6-213ENST00000614496 SETQ01105 290 aaPredicted RBP14.09□□□□□ -0.15
MSH6-213ENST00000614496 RASSF4Q9H2L5 321 aa14.09□□□□□ -0.15
MSH6-213ENST00000614496 SAP30BPQ9UHR5 308 aaKnown RBP14.09□□□□□ -0.15
MSH6-213ENST00000614496 SLIT1O75093 1534 aa14.09□□□□□ -0.15
MSH6-213ENST00000614496 IVLP07476 585 aa14.09□□□□□ -0.15
MSH6-213ENST00000614496 PLA2G4AP47712 749 aa14.09□□□□□ -0.15
MSH6-213ENST00000614496 RNASE9P60153 205 aaKnown RBP14.09□□□□□ -0.15
MSH6-213ENST00000614496 EPB41L4AQ9HCS5 686 aaPredicted RBP14.09□□□□□ -0.15
MSH6-213ENST00000614496 ADGRG1Q9Y653 693 aa14.09□□□□□ -0.15
MSH6-213ENST00000614496 CCDC151A5D8V7 595 aa14.09□□□□□ -0.15
MSH6-213ENST00000614496 TACC1O75410 805 aa14.09□□□□□ -0.15
MSH6-213ENST00000614496 KRT31Q15323 416 aa14.09□□□□□ -0.15
MSH6-213ENST00000614496 BMP2KQ9NSY1 1161 aaPredicted RBP14.09□□□□□ -0.15
MSH6-213ENST00000614496 ZNF446Q9NWS9 450 aa14.09□□□□□ -0.15
MSH6-213ENST00000614496 MRFAP1Q9Y605 127 aa14.09□□□□□ -0.15
MSH6-213ENST00000614496 MEGF6O75095 1541 aa14.09□□□□□ -0.15
MSH6-213ENST00000614496 PIK3C2AO00443 1686 aa14.08□□□□□ -0.15
MSH6-213ENST00000614496 ANKRD65E5RJM6 399 aa14.08□□□□□ -0.15
MSH6-213ENST00000614496 MFAP3LO75121 409 aa14.08□□□□□ -0.15
MSH6-213ENST00000614496 RPN1P04843 607 aaKnown RBP14.08□□□□□ -0.15
MSH6-213ENST00000614496 H2AFXP16104 143 aaPredicted RBP14.08□□□□□ -0.15
MSH6-213ENST00000614496 TFAP4Q01664 338 aa14.08□□□□□ -0.15
MSH6-213ENST00000614496 INF2Q27J81 1249 aa14.08□□□□□ -0.15
MSH6-213ENST00000614496 SGMS1Q86VZ5 419 aa14.08□□□□□ -0.15
MSH6-213ENST00000614496 FAM114A1Q8IWE2 563 aa14.08□□□□□ -0.15
MSH6-213ENST00000614496 DHX37Q8IY37 1157 aaKnown RBP14.08□□□□□ -0.15
MSH6-213ENST00000614496 ALS2CR12Q96Q35 445 aa14.08□□□□□ -0.15
MSH6-213ENST00000614496 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.08□□□□□ -0.15
MSH6-213ENST00000614496 FHOD1Q9Y613 1164 aa14.08□□□□□ -0.15
MSH6-213ENST00000614496 IBSPP21815 317 aaPredicted RBP14.08□□□□□ -0.16
MSH6-213ENST00000614496 AMPD3Q01432 767 aa14.08□□□□□ -0.16
MSH6-213ENST00000614496 RAD9BQ6WBX8 426 aa14.08□□□□□ -0.16
MSH6-213ENST00000614496 LUC7LQ9NQ29 371 aaKnown RBP14.08□□□□□ -0.16
MSH6-213ENST00000614496 ADAM21Q9UKJ8 722 aa14.08□□□□□ -0.16
MSH6-213ENST00000614496 KIAA0754O94854 1291 aa14.08□□□□□ -0.16
MSH6-213ENST00000614496 CUL4BQ13620 913 aa14.08□□□□□ -0.16
MSH6-213ENST00000614496 HLTFQ14527 1009 aaKnown RBP eCLIP14.08□□□□□ -0.162e-7■■■□□ 16.9
MSH6-213ENST00000614496 SAR1BQ9Y6B6 198 aa14.08□□□□□ -0.16
MSH6-213ENST00000614496 FAM208AQ9UK61 1670 aaKnown RBP14.08□□□□□ -0.16
MSH6-213ENST00000614496 SHTN1A0MZ66 631 aa14.08□□□□□ -0.16
MSH6-213ENST00000614496 SCG2P13521 617 aa14.08□□□□□ -0.16
MSH6-213ENST00000614496 SUSD4Q5VX71 490 aa14.08□□□□□ -0.16
MSH6-213ENST00000614496 PLCD3Q8N3E9 789 aa14.08□□□□□ -0.16
MSH6-213ENST00000614496 PANX2Q96RD6 677 aa14.08□□□□□ -0.16
MSH6-213ENST00000614496 UBA5Q9GZZ9 404 aa14.08□□□□□ -0.16
MSH6-213ENST00000614496 FAM207AQ9NSI2 230 aaPredicted RBP14.08□□□□□ -0.16
MSH6-213ENST00000614496 HPSEQ9Y251 543 aa14.08□□□□□ -0.16
MSH6-213ENST00000614496 XRN1Q8IZH2 1706 aaKnown RBP14.07□□□□□ -0.16
MSH6-213ENST00000614496 WDR19Q8NEZ3 1342 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 NMT2O60551 498 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 GOLGA8HP0CJ92 632 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 MRPS25P82663 173 aaKnown RBP14.07□□□□□ -0.16
MSH6-213ENST00000614496 TRIM14Q14142 442 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 ODF2Q5BJF6 829 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 DYMQ7RTS9 669 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 NBPF5PQ86XG9 351 aaPredicted RBP14.07□□□□□ -0.16
MSH6-213ENST00000614496 TAF4BQ92750 862 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 CARD10Q9BWT7 1032 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 CACNA1FO60840 1977 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 RGPD8O14715 1765 aaPredicted RBP14.07□□□□□ -0.16
MSH6-213ENST00000614496 TRIM49BA6NDI0 452 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 GTPBP6O43824 516 aaPredicted RBP14.07□□□□□ -0.16
MSH6-213ENST00000614496 KCNJ6P48051 423 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 ANKRD13CQ8N6S4 541 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms