RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 NUTM2BA6NNL0 878 aaPredicted RBP12.37□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 NUTM2EB1AL46 878 aaPredicted RBP12.37□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 BTBD18B2RXH4 712 aa12.37□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 GSTO1P78417 241 aa12.37□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 CFAP100Q494V2 611 aa12.37□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 METTL16Q86W50 562 aaKnown RBP12.37□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 NUTM2AQ8IVF1 878 aaPredicted RBP12.37□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 SDR42E1Q8WUS8 393 aa12.37□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 CPLX3Q8WVH0 158 aa12.37□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 SHISA4Q96DD7 197 aa12.37□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 MARCKSP29966 332 aaPredicted RBP12.37□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 NPY5RQ15761 445 aa12.37□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 SH3RF1Q7Z6J0 888 aa12.37□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 FAM163AQ96GL9 167 aaPredicted RBP12.37□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 NRDCO43847 1150 aa12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 IFIT1BQ5T764 474 aaKnown RBP12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 CCDC150Q8NCX0 1101 aa12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 PYM1Q9BRP8 204 aaKnown RBP12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 MYL10Q9BUA6 226 aa12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 CCNL1Q9UK58 526 aaPredicted RBP12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 CNTNAP5Q8WYK1 1306 aa12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 PNMA6AP0CW24 399 aaPredicted RBP12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 IL1R1P14778 569 aa12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 RXRAP19793 462 aa12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 SMARCA1P28370 1054 aa12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 CCZ1BP86790 482 aa12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 CCZ1P86791 482 aaPredicted RBP12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 RAD51AP2Q09MP3 1159 aa12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 WWC2Q6AWC2 1192 aa12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 SMARCE1Q969G3 411 aa12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 NGLY1Q96IV0 654 aa12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 XDHP47989 1333 aa12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 ATP1A3P13637 1013 aa12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 OAS2P29728 719 aaKnown RBP12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 KRT2P35908 639 aa12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 DYNLL1P63167 89 aaKnown RBP12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 C12orf60Q5U649 245 aa12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 NYAP1Q6ZVC0 841 aa12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 GPATCH11Q8N954 259 aa12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 MLKLQ8NB16 471 aa12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 PUF60Q9UHX1 559 aaKnown RBP12.36□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 HOXA10P31260 410 aaPredicted RBP12.35□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 PDE4BQ07343 736 aa12.35□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 MORC3Q14149 939 aa12.35□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 TMC4Q7Z404 712 aa12.35□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 DAGLBQ8NCG7 672 aa12.35□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 ABCF2Q9UG63 623 aa12.35□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 LCMT1Q9UIC8 334 aa12.35□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 GNPATO15228 680 aa12.35□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 ACTN4O43707 911 aaKnown RBP12.35□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 GNG11P61952 73 aa12.35□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 LONRF3Q496Y0 759 aa12.35□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 GALNT17Q6IS24 598 aa12.35□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 IPO4Q8TEX9 1081 aaKnown RBP12.35□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 CBFA2T2O43439 604 aa12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 MYL5Q02045 173 aa12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 SLC27A3Q5K4L6 730 aa12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 TRAPPC3LQ5T215 181 aa12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 FOXP4Q8IVH2 680 aaPredicted RBP12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 DESI2Q9BSY9 194 aa12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 ARGLU1Q9NWB6 273 aaPredicted RBP12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 DACH1Q9UI36 760 aa12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 USP21Q9UK80 565 aa12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 PSDA5PKW4 1024 aaPredicted RBP12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 USP17L12C9JPN9 530 aa12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 USP17L21D6R901 530 aa12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 KIF2AO00139 706 aaPredicted RBP12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 PFKFB3Q16875 520 aaPredicted RBP12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 RCSD1Q6JBY9 416 aa12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 ENOX1Q8TC92 643 aaKnown RBP12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 GDAP1L1Q96MZ0 367 aa12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 SRP68Q9UHB9 627 aaKnown RBP12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 WTIPA6NIX2 430 aaPredicted RBP12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 KLRK1P26718 216 aa12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 ERCC5P28715 1186 aaPredicted RBP12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 GJD4Q96KN9 370 aaPredicted RBP12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 PPP1R13BQ96KQ4 1090 aa12.34□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 MINDY4BA8MYZ0 360 aa12.33□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 M0R2N6 131 aa12.33□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 SPECC1Q5M775 1068 aa12.33□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 LZTS2Q9BRK4 669 aa12.33□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 ZNF18P17022 549 aa12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 ATP2C1P98194 919 aaPredicted RBP12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 ARL6IP4Q66PJ3 421 aaKnown RBP12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 PTF1AQ7RTS3 328 aa12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 ZKSCAN3Q9BRR0 538 aa12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 BRMS1Q9HCU9 246 aa12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.33□□□□□ -0.448e-11■■□□□ 13.6
SENP3-EIF4A1-201ENST00000614237 PLIN4Q96Q06 1357 aa12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 UBE2Q2LH0YL09 131 aa12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 TFRCP02786 760 aaKnown RBP12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 LDHCP07864 332 aa12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 ATP2B4P23634 1241 aa12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 KIF5BP33176 963 aa12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 GNAQP50148 359 aa12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 AKAP17AQ02040 695 aaKnown RBP12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 POSTNQ15063 836 aa12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 RRP12Q5JTH9 1297 aaKnown RBP12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 E4F1Q66K89 784 aaPredicted RBP12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 FCHSD1Q86WN1 690 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms