RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 PRKAR2AP13861 404 aaKnown RBP26.09■■□□□ 1.77
CBWD1-223ENST00000613988 WDR78Q5VTH9 848 aa26.09■■□□□ 1.77
CBWD1-223ENST00000613988 GPATCH3Q96I76 525 aa26.09■■□□□ 1.77
CBWD1-223ENST00000613988 BTBD7Q9P203 1132 aa26.09■■□□□ 1.77
CBWD1-223ENST00000613988 MYH8P13535 1937 aa26.09■■□□□ 1.77
CBWD1-223ENST00000613988 SPDYE16A6NNV3 312 aaPredicted RBP26.08■■□□□ 1.77
CBWD1-223ENST00000613988 AKR1B1P15121 316 aa26.08■■□□□ 1.77
CBWD1-223ENST00000613988 CDK8P49336 464 aa26.08■■□□□ 1.77
CBWD1-223ENST00000613988 COG2Q14746 738 aa26.08■■□□□ 1.77
CBWD1-223ENST00000613988 MAP3K21Q5TCX8 1036 aa26.08■■□□□ 1.77
CBWD1-223ENST00000613988 NECAB2Q7Z6G3 386 aa26.08■■□□□ 1.77
CBWD1-223ENST00000613988 SMC5Q8IY18 1101 aa26.08■■□□□ 1.77
CBWD1-223ENST00000613988 ANKLE1Q8NAG6 615 aa26.08■■□□□ 1.77
CBWD1-223ENST00000613988 CCDC17Q96LX7 622 aa26.08■■□□□ 1.77
CBWD1-223ENST00000613988 ARHGEF10LQ9HCE6 1279 aa26.08■■□□□ 1.77
CBWD1-223ENST00000613988 PCDH10Q9P2E7 1040 aa26.08■■□□□ 1.77
CBWD1-223ENST00000613988 EVI5O60447 810 aa26.07■■□□□ 1.76
CBWD1-223ENST00000613988 CHRDL2Q6WN34 429 aa26.07■■□□□ 1.76
CBWD1-223ENST00000613988 TANGO6Q9C0B7 1094 aa26.07■■□□□ 1.76
CBWD1-223ENST00000613988 HOXC10Q9NYD6 342 aa26.07■■□□□ 1.76
CBWD1-223ENST00000613988 SMIM22K7EJ46 135 aa26.07■■□□□ 1.76
CBWD1-223ENST00000613988 MAP2K5Q13163 448 aa26.07■■□□□ 1.76
CBWD1-223ENST00000613988 CCL14Q16627 93 aa26.07■■□□□ 1.76
CBWD1-223ENST00000613988 DIS3LQ8TF46 1054 aaKnown RBP26.07■■□□□ 1.76
CBWD1-223ENST00000613988 APBA2Q99767 749 aa26.07■■□□□ 1.76
CBWD1-223ENST00000613988 ICA1Q05084 483 aa26.06■■□□□ 1.76
CBWD1-223ENST00000613988 CACNB2Q08289 660 aaPredicted RBP26.06■■□□□ 1.76
CBWD1-223ENST00000613988 CTR9Q6PD62 1173 aa26.06■■□□□ 1.76
CBWD1-223ENST00000613988 C16orf86Q6ZW13 317 aa26.06■■□□□ 1.76
CBWD1-223ENST00000613988 SIAH1Q8IUQ4 282 aa26.06■■□□□ 1.76
CBWD1-223ENST00000613988 KBTBD3Q8NAB2 608 aa26.06■■□□□ 1.76
CBWD1-223ENST00000613988 SH2D4AQ9H788 454 aa26.06■■□□□ 1.76
CBWD1-223ENST00000613988 SLC15A5A6NIM6 579 aa26.05■■□□□ 1.76
CBWD1-223ENST00000613988 PTPREP23469 700 aa26.05■■□□□ 1.76
CBWD1-223ENST00000613988 TSHZ3Q63HK5 1081 aa26.05■■□□□ 1.76
CBWD1-223ENST00000613988 CLEC10AQ8IUN9 316 aa26.05■■□□□ 1.76
CBWD1-223ENST00000613988 STRBPQ96SI9 672 aaKnown RBP26.05■■□□□ 1.76
CBWD1-223ENST00000613988 TMX2Q9Y320 296 aa26.05■■□□□ 1.76
CBWD1-223ENST00000613988 IVNS1ABPQ9Y6Y0 642 aa26.05■■□□□ 1.76
CBWD1-223ENST00000613988 KIAA1755Q5JYT7 1200 aa26.04■■□□□ 1.76
CBWD1-223ENST00000613988 LPAR1Q92633 364 aa26.04■■□□□ 1.76
CBWD1-223ENST00000613988 NBPF3Q9H094 633 aa26.04■■□□□ 1.76
CBWD1-223ENST00000613988 OGDHLQ9ULD0 1010 aa26.04■■□□□ 1.76
CBWD1-223ENST00000613988 FXR1P51114 621 aaKnown RBP eCLIP26.03■■□□□ 1.76
CBWD1-223ENST00000613988 SPICE1Q8N0Z3 855 aa26.03■■□□□ 1.76
CBWD1-223ENST00000613988 ARPP21Q9UBL0 812 aaPredicted RBP26.03■■□□□ 1.76
CBWD1-223ENST00000613988 TRIOBPQ9H2D6 2365 aa26.02■■□□□ 1.76
CBWD1-223ENST00000613988 RNF113AO15541 343 aaKnown RBP26.02■■□□□ 1.76
CBWD1-223ENST00000613988 CCND3P30281 292 aaPredicted RBP26.02■■□□□ 1.76
CBWD1-223ENST00000613988 ATP2B2Q01814 1243 aa26.02■■□□□ 1.76
CBWD1-223ENST00000613988 VCPKMTQ9H867 229 aa26.02■■□□□ 1.76
CBWD1-223ENST00000613988 FLOT1O75955 427 aa26.01■■□□□ 1.75
CBWD1-223ENST00000613988 GRB14Q14449 540 aa26.01■■□□□ 1.75
CBWD1-223ENST00000613988 APPBP2Q92624 585 aa26.01■■□□□ 1.75
CBWD1-223ENST00000613988 OSBP2Q969R2 916 aa26.01■■□□□ 1.75
CBWD1-223ENST00000613988 MOV10L1Q9BXT6 1211 aaKnown RBP26.01■■□□□ 1.75
CBWD1-223ENST00000613988 KANSL2Q9H9L4 492 aa26.01■■□□□ 1.75
CBWD1-223ENST00000613988 RBM27Q9P2N5 1060 aaKnown RBP26.01■■□□□ 1.75
CBWD1-223ENST00000613988 ZFYP08048 801 aaPredicted RBP26■■□□□ 1.75
CBWD1-223ENST00000613988 EEF2P13639 858 aaKnown RBP26■■□□□ 1.75
CBWD1-223ENST00000613988 DSG3P32926 999 aa26■■□□□ 1.75
CBWD1-223ENST00000613988 MNX1P50219 401 aaPredicted RBP26■■□□□ 1.75
CBWD1-223ENST00000613988 MFSD14CQ5VZR4 134 aa26■■□□□ 1.75
CBWD1-223ENST00000613988 MB21D1Q8N884 522 aa26■■□□□ 1.75
CBWD1-223ENST00000613988 SPATC1LQ9H0A9 340 aa26■■□□□ 1.75
CBWD1-223ENST00000613988 C11orf49Q9H6J7 331 aa26■■□□□ 1.75
CBWD1-223ENST00000613988 FLRT1Q9NZU1 646 aa26■■□□□ 1.75
CBWD1-223ENST00000613988 RANBP2P49792 3224 aaKnown RBP26■■□□□ 1.75
CBWD1-223ENST00000613988 GSG1L2A8MUP6 293 aa25.99■■□□□ 1.75
CBWD1-223ENST00000613988 HOXC6P09630 235 aa25.99■■□□□ 1.75
CBWD1-223ENST00000613988 SBK1Q52WX2 424 aa25.99■■□□□ 1.75
CBWD1-223ENST00000613988 GIMAP6Q6P9H5 292 aa25.99■■□□□ 1.75
CBWD1-223ENST00000613988 RLFQ13129 1914 aa25.99■■□□□ 1.75
CBWD1-223ENST00000613988 TTC41PQ6P2S7 1318 aa25.98■■□□□ 1.75
CBWD1-223ENST00000613988 MINDY4BA8MYZ0 360 aa25.98■■□□□ 1.75
CBWD1-223ENST00000613988 WDR46O15213 610 aaKnown RBP25.98■■□□□ 1.75
CBWD1-223ENST00000613988 PLS1Q14651 629 aa25.98■■□□□ 1.75
CBWD1-223ENST00000613988 SAMD1Q6SPF0 538 aaPredicted RBP25.98■■□□□ 1.75
CBWD1-223ENST00000613988 DPP9Q86TI2 863 aa25.98■■□□□ 1.75
CBWD1-223ENST00000613988 ERC2O15083 957 aa25.97■■□□□ 1.75
CBWD1-223ENST00000613988 STRNO43815 780 aa25.97■■□□□ 1.75
CBWD1-223ENST00000613988 ERCC3P19447 782 aa25.97■■□□□ 1.75
CBWD1-223ENST00000613988 LRRFIP1Q32MZ4 808 aaKnown RBP25.97■■□□□ 1.75
CBWD1-223ENST00000613988 LHX8Q68G74 356 aa25.97■■□□□ 1.75
CBWD1-223ENST00000613988 STK11IPQ8N1F8 1099 aa25.97■■□□□ 1.75
CBWD1-223ENST00000613988 SHCBP1Q8NEM2 672 aa25.97■■□□□ 1.75
CBWD1-223ENST00000613988 NPLOC4Q8TAT6 608 aa25.97■■□□□ 1.75
CBWD1-223ENST00000613988 ATG4CQ96DT6 458 aa25.97■■□□□ 1.75
CBWD1-223ENST00000613988 MKNK2Q9HBH9 465 aa25.97■■□□□ 1.75
CBWD1-223ENST00000613988 GPAA1O43292 621 aa25.96■■□□□ 1.75
CBWD1-223ENST00000613988 GOPCQ9HD26 462 aa25.96■■□□□ 1.75
CBWD1-223ENST00000613988 ALPK3Q96L96 1907 aa25.96■■□□□ 1.75
CBWD1-223ENST00000613988 RAD21O60216 631 aa25.95■■□□□ 1.75
CBWD1-223ENST00000613988 APPP05067 770 aa25.95■■□□□ 1.75
CBWD1-223ENST00000613988 GNAT2P19087 354 aa25.95■■□□□ 1.75
CBWD1-223ENST00000613988 ADORA2AP29274 412 aa25.95■■□□□ 1.75
CBWD1-223ENST00000613988 NUCB1Q02818 461 aa25.95■■□□□ 1.75
CBWD1-223ENST00000613988 NCAPG2Q86XI2 1143 aa25.95■■□□□ 1.75
CBWD1-223ENST00000613988 C7orf61Q8IZ16 206 aa25.95■■□□□ 1.75
CBWD1-223ENST00000613988 MROH8Q9H579 483 aa25.95■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms