RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 SBF1O95248 1867 aa24.95■■□□□ 1.59
POLR2J3-220ENST00000613744 H3BQF6 201 aa24.95■■□□□ 1.58
POLR2J3-220ENST00000613744 MYL5Q02045 173 aa24.95■■□□□ 1.58
POLR2J3-220ENST00000613744 TICAM2Q86XR7 235 aa24.95■■□□□ 1.58
POLR2J3-220ENST00000613744 LAMA4Q16363 1823 aa24.95■■□□□ 1.58
POLR2J3-220ENST00000613744 GNG11P61952 73 aa24.94■■□□□ 1.58
POLR2J3-220ENST00000613744 STK38Q15208 465 aa24.94■■□□□ 1.58
POLR2J3-220ENST00000613744 SF3A1Q15459 793 aaKnown RBP24.94■■□□□ 1.58
POLR2J3-220ENST00000613744 TTC31Q49AM3 519 aaPredicted RBP24.94■■□□□ 1.58
POLR2J3-220ENST00000613744 C9orf131Q5VYM1 1079 aa24.94■■□□□ 1.58
POLR2J3-220ENST00000613744 KIFC2Q96AC6 838 aa24.94■■□□□ 1.58
POLR2J3-220ENST00000613744 ZNF274Q96GC6 653 aaPredicted RBP24.94■■□□□ 1.58
POLR2J3-220ENST00000613744 HSD3B7Q9H2F3 369 aa24.94■■□□□ 1.58
POLR2J3-220ENST00000613744 TUBE1Q9UJT0 475 aa24.94■■□□□ 1.58
POLR2J3-220ENST00000613744 RAB21Q9UL25 225 aa24.94■■□□□ 1.58
POLR2J3-220ENST00000613744 MYO5AQ9Y4I1 1855 aaKnown RBP24.94■■□□□ 1.58
POLR2J3-220ENST00000613744 ERLIN1O75477 346 aa24.93■■□□□ 1.58
POLR2J3-220ENST00000613744 IDH1O75874 414 aaKnown RBP24.93■■□□□ 1.58
POLR2J3-220ENST00000613744 TUBBP07437 444 aa24.93■■□□□ 1.58
POLR2J3-220ENST00000613744 GUCY2CP25092 1073 aa24.93■■□□□ 1.58
POLR2J3-220ENST00000613744 MFSD14BQ5SR56 506 aa24.93■■□□□ 1.58
POLR2J3-220ENST00000613744 USP17L3A6NCW0 530 aa24.93■■□□□ 1.58
POLR2J3-220ENST00000613744 USP17L4A6NCW7 530 aa24.93■■□□□ 1.58
POLR2J3-220ENST00000613744 ZNF202O95125 648 aa24.93■■□□□ 1.58
POLR2J3-220ENST00000613744 LMOD1P29536 600 aaPredicted RBP24.93■■□□□ 1.58
POLR2J3-220ENST00000613744 PRDX5P30044 214 aa24.93■■□□□ 1.58
POLR2J3-220ENST00000613744 USP17L1Q7RTZ2 530 aa24.93■■□□□ 1.58
POLR2J3-220ENST00000613744 ERCC4Q92889 916 aaPredicted RBP24.93■■□□□ 1.58
POLR2J3-220ENST00000613744 LRP2BPQ9P2M1 347 aa24.93■■□□□ 1.58
POLR2J3-220ENST00000613744 F8W031 263 aaPredicted RBP24.92■■□□□ 1.58
POLR2J3-220ENST00000613744 PSMD14O00487 310 aa24.92■■□□□ 1.58
POLR2J3-220ENST00000613744 SERPINC1P01008 464 aa24.92■■□□□ 1.58
POLR2J3-220ENST00000613744 CYP21A2P08686 494 aa24.92■■□□□ 1.58
POLR2J3-220ENST00000613744 CMA1P23946 247 aa24.92■■□□□ 1.58
POLR2J3-220ENST00000613744 CXCL9Q07325 125 aa24.92■■□□□ 1.58
POLR2J3-220ENST00000613744 BRAPQ7Z569 592 aa24.92■■□□□ 1.58
POLR2J3-220ENST00000613744 CERS5Q8N5B7 392 aa24.92■■□□□ 1.58
POLR2J3-220ENST00000613744 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.92■■□□□ 1.58
POLR2J3-220ENST00000613744 TBX2Q13207 712 aaPredicted RBP24.92■■□□□ 1.58
POLR2J3-220ENST00000613744 TEX2Q8IWB9 1127 aa24.92■■□□□ 1.58
POLR2J3-220ENST00000613744 MSANTD4Q8NCY6 345 aa24.92■■□□□ 1.58
POLR2J3-220ENST00000613744 WDR66Q8TBY9 1149 aa24.92■■□□□ 1.58
POLR2J3-220ENST00000613744 PPM1EQ8WY54 764 aa24.92■■□□□ 1.58
POLR2J3-220ENST00000613744 FAM205AQ6ZU69 1335 aa24.91■■□□□ 1.58
POLR2J3-220ENST00000613744 SPTLC2O15270 562 aa24.91■■□□□ 1.58
POLR2J3-220ENST00000613744 EXOSC10Q01780 885 aaKnown RBP24.91■■□□□ 1.58
POLR2J3-220ENST00000613744 TTF1Q15361 905 aaPredicted RBP24.91■■□□□ 1.58
POLR2J3-220ENST00000613744 CEP112Q8N8E3 955 aa24.91■■□□□ 1.58
POLR2J3-220ENST00000613744 RAI14Q9P0K7 980 aa24.91■■□□□ 1.58
POLR2J3-220ENST00000613744 ZBTB12Q9Y330 459 aaPredicted RBP24.91■■□□□ 1.58
POLR2J3-220ENST00000613744 CFAP100Q494V2 611 aa24.9■■□□□ 1.58
POLR2J3-220ENST00000613744 DACT2Q5SW24 774 aa24.9■■□□□ 1.58
POLR2J3-220ENST00000613744 SRGAP1Q7Z6B7 1085 aa24.9■■□□□ 1.58
POLR2J3-220ENST00000613744 WDR24Q96S15 920 aa24.9■■□□□ 1.58
POLR2J3-220ENST00000613744 BAG1Q99933 345 aaPredicted RBP24.9■■□□□ 1.58
POLR2J3-220ENST00000613744 ZNF541Q9H0D2 1346 aa24.9■■□□□ 1.58
POLR2J3-220ENST00000613744 MCMDC2Q4G0Z9 681 aa24.9■■□□□ 1.58
POLR2J3-220ENST00000613744 BEND6Q5SZJ8 279 aaPredicted RBP24.9■■□□□ 1.58
POLR2J3-220ENST00000613744 STRIP1Q5VSL9 837 aa24.9■■□□□ 1.58
POLR2J3-220ENST00000613744 FBXL16Q8N461 479 aa24.9■■□□□ 1.58
POLR2J3-220ENST00000613744 GBP3Q9H0R5 595 aa24.9■■□□□ 1.58
POLR2J3-220ENST00000613744 EPC1Q9H2F5 836 aa24.9■■□□□ 1.58
POLR2J3-220ENST00000613744 JRKLQ9Y4A0 524 aa24.9■■□□□ 1.58
POLR2J3-220ENST00000613744 FZD9O00144 591 aa24.89■■□□□ 1.58
POLR2J3-220ENST00000613744 CPP00450 1065 aa24.89■■□□□ 1.58
POLR2J3-220ENST00000613744 CHRM1P11229 460 aaPredicted RBP24.89■■□□□ 1.58
POLR2J3-220ENST00000613744 GJA3Q9Y6H8 435 aa24.89■■□□□ 1.58
POLR2J3-220ENST00000613744 SEC62Q99442 399 aaKnown RBP24.89■■□□□ 1.57
POLR2J3-220ENST00000613744 ACBD3Q9H3P7 528 aa24.89■■□□□ 1.57
POLR2J3-220ENST00000613744 PDS5AQ29RF7 1337 aaKnown RBP24.88■■□□□ 1.57
POLR2J3-220ENST00000613744 ATP1A3P13637 1013 aa24.88■■□□□ 1.57
POLR2J3-220ENST00000613744 EIF6P56537 245 aaKnown RBP24.88■■□□□ 1.57
POLR2J3-220ENST00000613744 CORO7P57737 925 aa24.88■■□□□ 1.57
POLR2J3-220ENST00000613744 CIAPIN1Q6FI81 312 aa24.88■■□□□ 1.57
POLR2J3-220ENST00000613744 KIAA0825Q8IV33 1275 aa24.88■■□□□ 1.57
POLR2J3-220ENST00000613744 FAM71BQ8TC56 605 aa24.88■■□□□ 1.57
POLR2J3-220ENST00000613744 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.88■■□□□ 1.57
POLR2J3-220ENST00000613744 VPS18Q9P253 973 aa24.88■■□□□ 1.57
POLR2J3-220ENST00000613744 RNF113AO15541 343 aaKnown RBP24.87■■□□□ 1.57
POLR2J3-220ENST00000613744 LDHBP07195 334 aaKnown RBP24.87■■□□□ 1.57
POLR2J3-220ENST00000613744 CHMP4BP1P59074 171 aa24.87■■□□□ 1.57
POLR2J3-220ENST00000613744 SLC9C2Q5TAH2 1124 aa24.87■■□□□ 1.57
POLR2J3-220ENST00000613744 SUGP1Q8IWZ8 645 aaKnown RBP24.87■■□□□ 1.57
POLR2J3-220ENST00000613744 TBC1D22AQ8WUA7 517 aa24.87■■□□□ 1.57
POLR2J3-220ENST00000613744 DPF2Q92785 391 aa24.87■■□□□ 1.57
POLR2J3-220ENST00000613744 DHX58Q96C10 678 aa24.87■■□□□ 1.57
POLR2J3-220ENST00000613744 NCAPGQ9BPX3 1015 aa24.87■■□□□ 1.57
POLR2J3-220ENST00000613744 PDE11AQ9HCR9 933 aa24.87■■□□□ 1.57
POLR2J3-220ENST00000613744 DICER1Q9UPY3 1922 aaKnown RBP24.86■■□□□ 1.57
POLR2J3-220ENST00000613744 DCAF8L1A6NGE4 600 aa24.86■■□□□ 1.57
POLR2J3-220ENST00000613744 EIF3CLB5ME19 914 aaKnown RBP24.86■■□□□ 1.57
POLR2J3-220ENST00000613744 BIN1O00499 593 aa24.86■■□□□ 1.57
POLR2J3-220ENST00000613744 MAGEB6Q8N7X4 407 aa24.86■■□□□ 1.57
POLR2J3-220ENST00000613744 EIF3CQ99613 913 aaKnown RBP24.86■■□□□ 1.57
POLR2J3-220ENST00000613744 FAM237AA0A1B0GTK4 181 aa24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 CUTAO60888 179 aa24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 VIL1P09327 827 aaKnown RBP24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 SCNN1DP51172 638 aa24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 GYS2P54840 703 aa24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 MECOMQ03112 1051 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms