RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 KRT23Q9C075 422 aa19.62■□□□□ 0.73
IRF1-211ENST00000613424 ASCC2Q9H1I8 757 aaPredicted RBP19.62■□□□□ 0.73
IRF1-211ENST00000613424 CNNM2Q9H8M5 875 aa19.62■□□□□ 0.73
IRF1-211ENST00000613424 ZSWIM5Q9P217 1185 aa19.62■□□□□ 0.73
IRF1-211ENST00000613424 USP17L15C9J2P7 530 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 USP17L13C9JLJ4 530 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 USP17L11C9JVI0 530 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 USP17L18D6R9N7 530 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 USP17L22D6RA61 530 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 USP17L17D6RBQ6 530 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 USP17L19D6RCP7 530 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 USP17L20D6RJB6 530 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 E7EWF7 191 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 SLC27A2O14975 620 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 NOVP48745 357 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 USP17L24Q0WX57 530 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 CREB3L3Q68CJ9 461 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 C17orf99Q6UX52 265 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 CATSPERGQ6ZRH7 1159 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 SPICE1Q8N0Z3 855 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 ZNF296Q8WUU4 475 aaPredicted RBP19.61■□□□□ 0.73
IRF1-211ENST00000613424 LPAR1Q92633 364 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 P2RX7Q99572 595 aaKnown RBP19.61■□□□□ 0.73
IRF1-211ENST00000613424 RPAP3Q9H6T3 665 aaPredicted RBP19.61■□□□□ 0.73
IRF1-211ENST00000613424 GOPCQ9HD26 462 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 CPA4Q9UI42 421 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 PNMA3Q9UL41 463 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 STX8Q9UNK0 236 aa19.61■□□□□ 0.73
IRF1-211ENST00000613424 RAD21O60216 631 aa19.6■□□□□ 0.73
IRF1-211ENST00000613424 TRDNQ13061 729 aa19.6■□□□□ 0.73
IRF1-211ENST00000613424 STOX1Q6ZVD7 989 aa19.6■□□□□ 0.73
IRF1-211ENST00000613424 ZKSCAN3Q9BRR0 538 aa19.6■□□□□ 0.73
IRF1-211ENST00000613424 PRDM10Q9NQV6 1147 aa19.6■□□□□ 0.73
IRF1-211ENST00000613424 ADGRA2Q96PE1 1338 aa19.59■□□□□ 0.73
IRF1-211ENST00000613424 F5H6K3 240 aa19.59■□□□□ 0.73
IRF1-211ENST00000613424 IRX3P78415 501 aaPredicted RBP19.59■□□□□ 0.73
IRF1-211ENST00000613424 KLRC3Q07444 240 aa19.59■□□□□ 0.73
IRF1-211ENST00000613424 LRRC47Q8N1G4 583 aaKnown RBP19.59■□□□□ 0.73
IRF1-211ENST00000613424 SMCR8Q8TEV9 937 aaPredicted RBP19.59■□□□□ 0.73
IRF1-211ENST00000613424 TTC14Q96N46 770 aa19.59■□□□□ 0.73
IRF1-211ENST00000613424 SYNPO2Q9UMS6 1093 aa19.59■□□□□ 0.73
IRF1-211ENST00000613424 MYH4Q9Y623 1939 aa19.59■□□□□ 0.73
IRF1-211ENST00000613424 CASP8AP2Q9UKL3 1982 aa19.58■□□□□ 0.73
IRF1-211ENST00000613424 WDR46O15213 610 aaKnown RBP19.58■□□□□ 0.72
IRF1-211ENST00000613424 FKTNO75072 461 aa19.58■□□□□ 0.72
IRF1-211ENST00000613424 REC8O95072 547 aa19.58■□□□□ 0.72
IRF1-211ENST00000613424 SP3Q02447 781 aa19.58■□□□□ 0.72
IRF1-211ENST00000613424 IQCA1Q86XH1 822 aa19.58■□□□□ 0.72
IRF1-211ENST00000613424 NCOA7Q8NI08 942 aa19.58■□□□□ 0.72
IRF1-211ENST00000613424 NDUFB10O96000 172 aa19.57■□□□□ 0.72
IRF1-211ENST00000613424 BCRP11274 1271 aa19.57■□□□□ 0.72
IRF1-211ENST00000613424 CCDC178Q5BJE1 867 aa19.57■□□□□ 0.72
IRF1-211ENST00000613424 RNF20Q5VTR2 975 aa19.57■□□□□ 0.72
IRF1-211ENST00000613424 RCSD1Q6JBY9 416 aa19.57■□□□□ 0.72
IRF1-211ENST00000613424 CYB5R4Q7L1T6 521 aa19.57■□□□□ 0.72
IRF1-211ENST00000613424 GMCL1P1Q8NEA9 526 aa19.57■□□□□ 0.72
IRF1-211ENST00000613424 ZSCAN10Q96SZ4 725 aaPredicted RBP19.57■□□□□ 0.72
IRF1-211ENST00000613424 TMEM47Q9BQJ4 181 aa19.57■□□□□ 0.72
IRF1-211ENST00000613424 TOP1P11387 765 aaKnown RBP19.56■□□□□ 0.72
IRF1-211ENST00000613424 GCLCP48506 637 aaPredicted RBP19.56■□□□□ 0.72
IRF1-211ENST00000613424 HERVK_113P62684 666 aa19.56■□□□□ 0.72
IRF1-211ENST00000613424 FAM83BQ5T0W9 1011 aa19.56■□□□□ 0.72
IRF1-211ENST00000613424 SLFN13Q68D06 897 aa19.56■□□□□ 0.72
IRF1-211ENST00000613424 RALYLQ86SE5 291 aaKnown RBP19.56■□□□□ 0.72
IRF1-211ENST00000613424 DGKHQ86XP1 1220 aa19.56■□□□□ 0.72
IRF1-211ENST00000613424 NUP88Q99567 741 aaPredicted RBP19.56■□□□□ 0.72
IRF1-211ENST00000613424 TANGO6Q9C0B7 1094 aa19.56■□□□□ 0.72
IRF1-211ENST00000613424 COG2Q14746 738 aa19.55■□□□□ 0.72
IRF1-211ENST00000613424 POTEEQ6S8J3 1075 aa19.55■□□□□ 0.72
IRF1-211ENST00000613424 RASEFQ8IZ41 740 aa19.55■□□□□ 0.72
IRF1-211ENST00000613424 ANKRD13CQ8N6S4 541 aa19.55■□□□□ 0.72
IRF1-211ENST00000613424 ANKS1AQ92625 1134 aa19.55■□□□□ 0.72
IRF1-211ENST00000613424 HOXC10Q9NYD6 342 aa19.55■□□□□ 0.72
IRF1-211ENST00000613424 EPB41L2O43491 1005 aaKnown RBP19.54■□□□□ 0.72
IRF1-211ENST00000613424 FLOT1O75955 427 aa19.54■□□□□ 0.72
IRF1-211ENST00000613424 TSGA10IPQ3SY00 556 aa19.54■□□□□ 0.72
IRF1-211ENST00000613424 CHST3Q7LGC8 479 aa19.54■□□□□ 0.72
IRF1-211ENST00000613424 MB21D2Q8IYB1 491 aaPredicted RBP19.54■□□□□ 0.72
IRF1-211ENST00000613424 ENAHQ8N8S7 591 aaPredicted RBP19.54■□□□□ 0.72
IRF1-211ENST00000613424 CHMP4CQ96CF2 233 aa19.54■□□□□ 0.72
IRF1-211ENST00000613424 UBAC1Q9BSL1 405 aa19.54■□□□□ 0.72
IRF1-211ENST00000613424 USP26Q9BXU7 913 aa19.54■□□□□ 0.72
IRF1-211ENST00000613424 RBPJLQ9UBG7 517 aa19.54■□□□□ 0.72
IRF1-211ENST00000613424 TNKSO95271 1327 aa19.53■□□□□ 0.72
IRF1-211ENST00000613424 SPDYE16A6NNV3 312 aaPredicted RBP19.53■□□□□ 0.72
IRF1-211ENST00000613424 PEX10O60683 326 aa19.53■□□□□ 0.72
IRF1-211ENST00000613424 ZKSCAN1P17029 563 aaPredicted RBP19.53■□□□□ 0.72
IRF1-211ENST00000613424 MCCP23508 829 aa19.53■□□□□ 0.72
IRF1-211ENST00000613424 DSG3P32926 999 aa19.53■□□□□ 0.72
IRF1-211ENST00000613424 HSPA4P34932 840 aa19.53■□□□□ 0.72
IRF1-211ENST00000613424 LBX2Q6XYB7 198 aa19.53■□□□□ 0.72
IRF1-211ENST00000613424 CD99L2Q8TCZ2 262 aa19.53■□□□□ 0.72
IRF1-211ENST00000613424 KCNB2Q92953 911 aa19.53■□□□□ 0.72
IRF1-211ENST00000613424 ERO1AQ96HE7 468 aa19.53■□□□□ 0.72
IRF1-211ENST00000613424 GMCL1Q96IK5 515 aa19.53■□□□□ 0.72
IRF1-211ENST00000613424 TXNRD2Q9NNW7 524 aa19.53■□□□□ 0.72
IRF1-211ENST00000613424 FBXO28Q9NVF7 368 aa19.53■□□□□ 0.72
IRF1-211ENST00000613424 MTMR7Q9Y216 660 aa19.53■□□□□ 0.72
IRF1-211ENST00000613424 BMP3P12645 472 aa19.52■□□□□ 0.72
IRF1-211ENST00000613424 ANTXR2P58335 489 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms