RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.81■□□□□ 0.67e-7■□□□□ 11.1
CNOT3-208ENST00000613073 SHC4Q6S5L8 630 aa18.8■□□□□ 0.6
CNOT3-208ENST00000613073 AOPEPQ8N6M6 819 aa18.8■□□□□ 0.6
CNOT3-208ENST00000613073 UBXN4Q92575 508 aa18.8■□□□□ 0.6
CNOT3-208ENST00000613073 BIN1O00499 593 aa18.8■□□□□ 0.6
CNOT3-208ENST00000613073 ATP2B4P23634 1241 aa18.8■□□□□ 0.6
CNOT3-208ENST00000613073 PKN1Q16512 942 aa18.8■□□□□ 0.6
CNOT3-208ENST00000613073 SBK1Q52WX2 424 aa18.8■□□□□ 0.6
CNOT3-208ENST00000613073 MAPKAPK5Q8IW41 473 aa18.8■□□□□ 0.6
CNOT3-208ENST00000613073 RNF26Q9BY78 433 aaPredicted RBP18.8■□□□□ 0.6
CNOT3-208ENST00000613073 RASSF4Q9H2L5 321 aa18.8■□□□□ 0.6
CNOT3-208ENST00000613073 CREBRFQ8IUR6 639 aa18.79■□□□□ 0.6
CNOT3-208ENST00000613073 TBC1D16Q8TBP0 767 aa18.79■□□□□ 0.6
CNOT3-208ENST00000613073 DNAI1Q9UI46 699 aa18.79■□□□□ 0.6
CNOT3-208ENST00000613073 RIMBP2O15034 1052 aa18.79■□□□□ 0.6
CNOT3-208ENST00000613073 PPP6R2O75170 966 aa18.79■□□□□ 0.6
CNOT3-208ENST00000613073 BBOX1O75936 387 aa18.79■□□□□ 0.6
CNOT3-208ENST00000613073 BAG3O95817 575 aa18.79■□□□□ 0.6
CNOT3-208ENST00000613073 OAS2P29728 719 aaKnown RBP18.79■□□□□ 0.6
CNOT3-208ENST00000613073 TFAP4Q01664 338 aa18.79■□□□□ 0.6
CNOT3-208ENST00000613073 FUT2Q10981 343 aa18.79■□□□□ 0.6
CNOT3-208ENST00000613073 ZNF827Q17R98 1081 aa18.79■□□□□ 0.6
CNOT3-208ENST00000613073 OLFM4Q6UX06 510 aa18.79■□□□□ 0.6
CNOT3-208ENST00000613073 JMYQ8N9B5 988 aa18.79■□□□□ 0.6
CNOT3-208ENST00000613073 SLC44A5Q8NCS7 719 aa18.79■□□□□ 0.6
CNOT3-208ENST00000613073 CABP5Q9NP86 173 aa18.79■□□□□ 0.6
CNOT3-208ENST00000613073 MKRN1Q9UHC7 482 aaKnown RBP18.79■□□□□ 0.6
CNOT3-208ENST00000613073 SYKP43405 635 aa18.78■□□□□ 0.6
CNOT3-208ENST00000613073 TPM4P67936 248 aa18.78■□□□□ 0.6
CNOT3-208ENST00000613073 GSTO1P78417 241 aa18.78■□□□□ 0.6
CNOT3-208ENST00000613073 C12orf60Q5U649 245 aa18.78■□□□□ 0.6
CNOT3-208ENST00000613073 ISM2Q6H9L7 571 aa18.78■□□□□ 0.6
CNOT3-208ENST00000613073 SARM1Q6SZW1 724 aa18.78■□□□□ 0.6
CNOT3-208ENST00000613073 FOXP1Q9H334 677 aaPredicted RBP18.78■□□□□ 0.6
CNOT3-208ENST00000613073 L2HGDHQ9H9P8 463 aa18.78■□□□□ 0.6
CNOT3-208ENST00000613073 ANO10Q9NW15 660 aa18.78■□□□□ 0.6
CNOT3-208ENST00000613073 KIAA1468Q9P260 1216 aa18.78■□□□□ 0.6
CNOT3-208ENST00000613073 PCDHB6Q9Y5E3 794 aa18.78■□□□□ 0.6
CNOT3-208ENST00000613073 MYH6P13533 1939 aa18.78■□□□□ 0.6
CNOT3-208ENST00000613073 FAM205CA6NFA0 338 aa18.78■□□□□ 0.6
CNOT3-208ENST00000613073 ZSCAN26Q16670 478 aa18.78■□□□□ 0.6
CNOT3-208ENST00000613073 MKNK2Q9HBH9 465 aa18.78■□□□□ 0.6
CNOT3-208ENST00000613073 MTMR7Q9Y216 660 aa18.78■□□□□ 0.6
CNOT3-208ENST00000613073 MYO1CO00159 1063 aa18.77■□□□□ 0.6
CNOT3-208ENST00000613073 SMC2O95347 1197 aa18.77■□□□□ 0.6
CNOT3-208ENST00000613073 BTDP43251 543 aa18.77■□□□□ 0.6
CNOT3-208ENST00000613073 PLCD1P51178 756 aa18.77■□□□□ 0.6
CNOT3-208ENST00000613073 FAM193AP78312 1265 aa18.77■□□□□ 0.6
CNOT3-208ENST00000613073 PPP2R5BQ15173 497 aa18.77■□□□□ 0.6
CNOT3-208ENST00000613073 MFSD14BQ5SR56 506 aa18.77■□□□□ 0.6
CNOT3-208ENST00000613073 TMC6Q7Z403 805 aa18.77■□□□□ 0.6
CNOT3-208ENST00000613073 FAM177A1Q8N128 213 aaPredicted RBP18.77■□□□□ 0.6
CNOT3-208ENST00000613073 TXLNBQ8N3L3 684 aa18.77■□□□□ 0.6
CNOT3-208ENST00000613073 SRBD1Q8N5C6 995 aaKnown RBP18.77■□□□□ 0.6
CNOT3-208ENST00000613073 CTCFLQ8NI51 663 aaPredicted RBP18.77■□□□□ 0.6
CNOT3-208ENST00000613073 MAST2Q6P0Q8 1798 aa18.77■□□□□ 0.6
CNOT3-208ENST00000613073 GRIN1Q05586 938 aa18.77■□□□□ 0.6
CNOT3-208ENST00000613073 ZRSR1Q15695 479 aaKnown RBP18.77■□□□□ 0.6
CNOT3-208ENST00000613073 C15orf52Q6ZUT6 534 aaKnown RBP18.77■□□□□ 0.6
CNOT3-208ENST00000613073 DHX40Q8IX18 779 aaKnown RBP18.77■□□□□ 0.6
CNOT3-208ENST00000613073 MNS1Q8NEH6 495 aa18.77■□□□□ 0.6
CNOT3-208ENST00000613073 RBM28Q9NW13 759 aaKnown RBP18.77■□□□□ 0.6
CNOT3-208ENST00000613073 ARGLU1Q9NWB6 273 aaPredicted RBP18.77■□□□□ 0.6
CNOT3-208ENST00000613073 SASH3O75995 380 aa18.76■□□□□ 0.59
CNOT3-208ENST00000613073 ZRANB2O95218 330 aaKnown RBP eCLIP18.76■□□□□ 0.59
CNOT3-208ENST00000613073 CALM1P0DP23 149 aa18.76■□□□□ 0.59
CNOT3-208ENST00000613073 CALM2P0DP24 149 aa18.76■□□□□ 0.59
CNOT3-208ENST00000613073 CALM3P0DP25 149 aa18.76■□□□□ 0.59
CNOT3-208ENST00000613073 TMTC3Q6ZXV5 915 aa18.76■□□□□ 0.59
CNOT3-208ENST00000613073 RTFDC1Q9BY42 306 aaPredicted RBP18.76■□□□□ 0.59
CNOT3-208ENST00000613073 USP17L3A6NCW0 530 aa18.76■□□□□ 0.59
CNOT3-208ENST00000613073 USP17L4A6NCW7 530 aa18.76■□□□□ 0.59
CNOT3-208ENST00000613073 PRPF3O43395 683 aaKnown RBP18.76■□□□□ 0.59
CNOT3-208ENST00000613073 DDAH1O94760 285 aa18.76■□□□□ 0.59
CNOT3-208ENST00000613073 APBA3O96018 575 aa18.76■□□□□ 0.59
CNOT3-208ENST00000613073 HOXA10P31260 410 aaPredicted RBP18.76■□□□□ 0.59
CNOT3-208ENST00000613073 DPCR1Q3MIW9 517 aa18.76■□□□□ 0.59
CNOT3-208ENST00000613073 RCSD1Q6JBY9 416 aa18.76■□□□□ 0.59
CNOT3-208ENST00000613073 USP17L1Q7RTZ2 530 aa18.76■□□□□ 0.59
CNOT3-208ENST00000613073 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.76■□□□□ 0.59
CNOT3-208ENST00000613073 IL17RBQ9NRM6 502 aa18.76■□□□□ 0.59
CNOT3-208ENST00000613073 KIAA1551Q9HCM1 1747 aa18.76■□□□□ 0.59
CNOT3-208ENST00000613073 URI1O94763 535 aaPredicted RBP18.76■□□□□ 0.59
CNOT3-208ENST00000613073 CAVIN2O95810 425 aa18.76■□□□□ 0.59
CNOT3-208ENST00000613073 LDHCP07864 332 aa18.76■□□□□ 0.59
CNOT3-208ENST00000613073 IL1R1P14778 569 aa18.76■□□□□ 0.59
CNOT3-208ENST00000613073 XBP1P17861 261 aa18.76■□□□□ 0.59
CNOT3-208ENST00000613073 EARS2Q5JPH6 523 aaKnown RBP18.76■□□□□ 0.59
CNOT3-208ENST00000613073 COL23A1Q86Y22 540 aaPredicted RBP18.76■□□□□ 0.59
CNOT3-208ENST00000613073 CARD6Q9BX69 1037 aa18.76■□□□□ 0.59
CNOT3-208ENST00000613073 LAMB1P07942 1786 aa18.75■□□□□ 0.59
CNOT3-208ENST00000613073 KIF2AO00139 706 aaPredicted RBP18.75■□□□□ 0.59
CNOT3-208ENST00000613073 PPEF1O14829 653 aaPredicted RBP18.75■□□□□ 0.59
CNOT3-208ENST00000613073 VEGFAP15692 232 aaPredicted RBP18.75■□□□□ 0.59
CNOT3-208ENST00000613073 CCDC93Q567U6 631 aa18.75■□□□□ 0.59
CNOT3-208ENST00000613073 RILPL1Q5EBL4 403 aa18.75■□□□□ 0.59
CNOT3-208ENST00000613073 KRI1Q8N9T8 703 aaKnown RBP18.75■□□□□ 0.59
CNOT3-208ENST00000613073 LMAN1P49257 510 aa18.75■□□□□ 0.59
CNOT3-208ENST00000613073 RESP18Q5W5W9 173 aa18.75■□□□□ 0.59
CNOT3-208ENST00000613073 CEP57L1Q8IYX8 460 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms