RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 NEK11Q8NG66 645 aa14.41□□□□□ -0.1
PCDHGA4-202ENST00000612927 CCDC88AQ3V6T2 1871 aa14.41□□□□□ -0.1
PCDHGA4-202ENST00000612927 ATP2B1P20020 1258 aa14.4□□□□□ -0.1
PCDHGA4-202ENST00000612927 SPTY2D1Q68D10 685 aaPredicted RBP14.4□□□□□ -0.1
PCDHGA4-202ENST00000612927 WASF1Q92558 559 aa14.4□□□□□ -0.1
PCDHGA4-202ENST00000612927 SHISA4Q96DD7 197 aa14.4□□□□□ -0.1
PCDHGA4-202ENST00000612927 TRERF1Q96PN7 1200 aa14.4□□□□□ -0.1
PCDHGA4-202ENST00000612927 ATP8A2Q9NTI2 1148 aa14.4□□□□□ -0.1
PCDHGA4-202ENST00000612927 LAMB1P07942 1786 aa14.4□□□□□ -0.1
PCDHGA4-202ENST00000612927 KIAA1551Q9HCM1 1747 aa14.4□□□□□ -0.1
PCDHGA4-202ENST00000612927 SAFBQ15424 915 aaKnown RBP eCLIP14.4□□□□□ -0.1
PCDHGA4-202ENST00000612927 KRBA2Q6ZNG9 492 aa14.4□□□□□ -0.1
PCDHGA4-202ENST00000612927 MNS1Q8NEH6 495 aa14.4□□□□□ -0.1
PCDHGA4-202ENST00000612927 BPIFA3Q9BQP9 254 aa14.4□□□□□ -0.1
PCDHGA4-202ENST00000612927 CCDC196A0A1B0GTZ2 297 aa14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 TADA3O75528 432 aa14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 SMC2O95347 1197 aa14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 DEXIO95424 95 aa14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 LDHBP07195 334 aaKnown RBP14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 PCP11498 1178 aaKnown RBP14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 NCAPHQ15003 741 aa14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 SLC4A8Q2Y0W8 1093 aa14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 IFIT1BQ5T764 474 aaKnown RBP14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 ZNF804AQ7Z570 1209 aa14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 METTL16Q86W50 562 aaKnown RBP14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 PROM2Q8N271 834 aa14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 WDR66Q8TBY9 1149 aa14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 PSD3Q9NYI0 1048 aa14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 IFNKQ9P0W0 207 aa14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 FAM205CA6NFA0 338 aa14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 POLR3GO15318 223 aaPredicted RBP14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 FOXN1O15353 648 aa14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 UFL1O94874 794 aa14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 TNNT3P45378 269 aaPredicted RBP14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 DIXDC1Q155Q3 683 aa14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 LONRF3Q496Y0 759 aa14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 ARMCX5Q6P1M9 558 aa14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 XPO4Q9C0E2 1151 aaKnown RBP14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 ARPP21Q9UBL0 812 aaPredicted RBP14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 DNAI1Q9UI46 699 aa14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 PCDHB6Q9Y5E3 794 aa14.39□□□□□ -0.11
PCDHGA4-202ENST00000612927 ORC4O43929 436 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 NMT2O60551 498 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 CUTAO60888 179 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 PLEKHA8P1O95397 391 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 USP17L8P0C7I0 530 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 LMOD1P29536 600 aaPredicted RBP14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 ZSCAN26Q16670 478 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 FAM47AQ5JRC9 791 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 C15orf52Q6ZUT6 534 aaKnown RBP14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 IQCA1Q86XH1 822 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 KRI1Q8N9T8 703 aaKnown RBP14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 SMARCE1Q969G3 411 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 RBM17Q96I25 401 aaKnown RBP14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 VPS54Q9P1Q0 977 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 KCNH3Q9ULD8 1083 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 DLEC1Q9Y238 1755 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 POLRMTO00411 1230 aaKnown RBP14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 SBK1Q52WX2 424 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 GOLGA5Q8TBA6 731 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 SH3RF3Q8TEJ3 882 aaPredicted RBP14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 YY1AP1Q9H869 796 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 TUBE1Q9UJT0 475 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 ATP1A3P13637 1013 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 OAS2P29728 719 aaKnown RBP14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 TXNRD1Q16881 649 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 TMED8Q6PL24 325 aaPredicted RBP14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 CATIPQ7Z7H3 387 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 HOMER1Q86YM7 354 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 MCM9Q9NXL9 1143 aa14.38□□□□□ -0.11
PCDHGA4-202ENST00000612927 FAM237AA0A1B0GTK4 181 aa14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 TBC1D8O95759 1140 aa14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 FUT2Q10981 343 aa14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 CERS3Q8IU89 383 aa14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 FOXP4Q8IVH2 680 aaPredicted RBP14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 CNNM3Q8NE01 707 aa14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 FOXP1Q9H334 677 aaPredicted RBP14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 MKRN1Q9UHC7 482 aaKnown RBP14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 GGA1Q9UJY5 639 aa14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 FBXO2Q9UK22 296 aaPredicted RBP14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 ATP2B4P23634 1241 aa14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 TROAPQ12815 778 aa14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 TMC6Q7Z403 805 aa14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 IQUBQ8NA54 791 aa14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 EXOC4Q96A65 974 aa14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 RNF26Q9BY78 433 aaPredicted RBP14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 HSD3B7Q9H2F3 369 aa14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 CD209Q9NNX6 404 aa14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 CABP5Q9NP86 173 aa14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 RSPH14Q9UHP6 348 aa14.37□□□□□ -0.11
PCDHGA4-202ENST00000612927 MYO1CO00159 1063 aa14.36□□□□□ -0.11
PCDHGA4-202ENST00000612927 SMC1AQ14683 1233 aaKnown RBP14.36□□□□□ -0.11
PCDHGA4-202ENST00000612927 EARS2Q5JPH6 523 aaKnown RBP14.36□□□□□ -0.11
PCDHGA4-202ENST00000612927 CC2D1AQ6P1N0 951 aaPredicted RBP14.36□□□□□ -0.11
PCDHGA4-202ENST00000612927 HOXA10P31260 410 aaPredicted RBP14.36□□□□□ -0.11
PCDHGA4-202ENST00000612927 USP5P45974 858 aa14.36□□□□□ -0.11
PCDHGA4-202ENST00000612927 PKN1Q16512 942 aa14.36□□□□□ -0.11
PCDHGA4-202ENST00000612927 RILPL1Q5EBL4 403 aa14.36□□□□□ -0.11
PCDHGA4-202ENST00000612927 FCHSD1Q86WN1 690 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms