RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 KANSL2Q9H9L4 492 aa15.02■□□□□ -0
PRKN-210ENST00000612540 MTMR4Q9NYA4 1195 aa15.02■□□□□ -0
PRKN-210ENST00000612540 CLIP2Q9UDT6 1046 aa15.02■□□□□ -0
PRKN-210ENST00000612540 ZNF112Q9UJU3 913 aa15.02■□□□□ -0
PRKN-210ENST00000612540 SLC12A7Q9Y666 1083 aa15.02■□□□□ -0
PRKN-210ENST00000612540 K7ELQ4 463 aaPredicted RBP15.01□□□□□ -0.01
PRKN-210ENST00000612540 TOP1P11387 765 aaKnown RBP15.01□□□□□ -0.01
PRKN-210ENST00000612540 GUCY1A2P33402 732 aa15.01□□□□□ -0.01
PRKN-210ENST00000612540 ZNF157P51786 506 aaPredicted RBP15.01□□□□□ -0.01
PRKN-210ENST00000612540 RCSD1Q6JBY9 416 aa15.01□□□□□ -0.01
PRKN-210ENST00000612540 CATIPQ7Z7H3 387 aa15.01□□□□□ -0.01
PRKN-210ENST00000612540 CCDC84Q86UT8 332 aaPredicted RBP15.01□□□□□ -0.01
PRKN-210ENST00000612540 DGKHQ86XP1 1220 aa15.01□□□□□ -0.01
PRKN-210ENST00000612540 ZNF654Q8IZM8 581 aa15.01□□□□□ -0.01
PRKN-210ENST00000612540 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.01□□□□□ -0.01
PRKN-210ENST00000612540 NUP133Q8WUM0 1156 aa15.01□□□□□ -0.01
PRKN-210ENST00000612540 CHMP4CQ96CF2 233 aa15.01□□□□□ -0.01
PRKN-210ENST00000612540 MYL10Q9BUA6 226 aa15.01□□□□□ -0.01
PRKN-210ENST00000612540 AGXT2Q9BYV1 514 aa15.01□□□□□ -0.01
PRKN-210ENST00000612540 TBC1D2Q9BYX2 928 aa15.01□□□□□ -0.01
PRKN-210ENST00000612540 ARHGEF10LQ9HCE6 1279 aa15.01□□□□□ -0.01
PRKN-210ENST00000612540 GINM1Q9NU53 330 aa15.01□□□□□ -0.01
PRKN-210ENST00000612540 DAXXQ9UER7 740 aaPredicted RBP15.01□□□□□ -0.01
PRKN-210ENST00000612540 BRPF3Q9ULD4 1205 aa15.01□□□□□ -0.01
PRKN-210ENST00000612540 TPCN1Q9ULQ1 816 aa15.01□□□□□ -0.01
PRKN-210ENST00000612540 ISY1Q9ULR0 285 aaKnown RBP15.01□□□□□ -0.01
PRKN-210ENST00000612540 GOLGA8AA7E2F4 631 aa15□□□□□ -0.01
PRKN-210ENST00000612540 ZBTB43O43298 467 aa15□□□□□ -0.01
PRKN-210ENST00000612540 LARGE1O95461 756 aa15□□□□□ -0.01
PRKN-210ENST00000612540 SLC10A3P09131 477 aa15□□□□□ -0.01
PRKN-210ENST00000612540 EEF2P13639 858 aaKnown RBP15□□□□□ -0.01
PRKN-210ENST00000612540 RXRAP19793 462 aa15□□□□□ -0.01
PRKN-210ENST00000612540 KIF23Q02241 960 aaPredicted RBP15□□□□□ -0.01
PRKN-210ENST00000612540 APOA5Q6Q788 366 aa15□□□□□ -0.01
PRKN-210ENST00000612540 SGMS1Q86VZ5 419 aa15□□□□□ -0.01
PRKN-210ENST00000612540 CCDC144CPQ8IYA2 1237 aa15□□□□□ -0.01
PRKN-210ENST00000612540 FBXL16Q8N461 479 aa15□□□□□ -0.01
PRKN-210ENST00000612540 PNMA1Q8ND90 353 aa15□□□□□ -0.01
PRKN-210ENST00000612540 ZSCAN31Q96LW9 406 aaPredicted RBP15□□□□□ -0.01
PRKN-210ENST00000612540 FEZ1Q99689 392 aa15□□□□□ -0.01
PRKN-210ENST00000612540 TMEM47Q9BQJ4 181 aa15□□□□□ -0.01
PRKN-210ENST00000612540 SLKQ9H2G2 1235 aaPredicted RBP15□□□□□ -0.01
PRKN-210ENST00000612540 USP17L5A8MUK1 530 aa14.99□□□□□ -0.01
PRKN-210ENST00000612540 UBE2Q2LH0YL09 131 aa14.99□□□□□ -0.01
PRKN-210ENST00000612540 HSP90AA1P07900 732 aaKnown RBP14.99□□□□□ -0.01
PRKN-210ENST00000612540 CCT2P78371 535 aaKnown RBP14.99□□□□□ -0.01
PRKN-210ENST00000612540 VGLL4Q14135 290 aa14.99□□□□□ -0.01
PRKN-210ENST00000612540 NOL9Q5SY16 702 aaKnown RBP14.99□□□□□ -0.01
PRKN-210ENST00000612540 ANKRD13AQ8IZ07 590 aa14.99□□□□□ -0.01
PRKN-210ENST00000612540 TMX3Q96JJ7 454 aa14.99□□□□□ -0.01
PRKN-210ENST00000612540 MCOLN1Q9GZU1 580 aa14.99□□□□□ -0.01
PRKN-210ENST00000612540 ELP3Q9H9T3 547 aa14.99□□□□□ -0.01
PRKN-210ENST00000612540 SH2B1Q9NRF2 756 aaPredicted RBP14.99□□□□□ -0.01
PRKN-210ENST00000612540 SAGE1Q9NXZ1 904 aa14.99□□□□□ -0.01
PRKN-210ENST00000612540 NYAP2Q9P242 653 aa14.99□□□□□ -0.01
PRKN-210ENST00000612540 PHIPQ8WWQ0 1821 aa14.99□□□□□ -0.01
PRKN-210ENST00000612540 DDAH1O94760 285 aa14.98□□□□□ -0.01
PRKN-210ENST00000612540 PDIA3P30101 505 aaKnown RBP14.98□□□□□ -0.01
PRKN-210ENST00000612540 METAP2P50579 478 aaKnown RBP eCLIP14.98□□□□□ -0.01
PRKN-210ENST00000612540 FKBP1BP68106 108 aa14.98□□□□□ -0.01
PRKN-210ENST00000612540 ZYXQ15942 572 aaKnown RBP14.98□□□□□ -0.01
PRKN-210ENST00000612540 ME3Q16798 604 aa14.98□□□□□ -0.01
PRKN-210ENST00000612540 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.98□□□□□ -0.01
PRKN-210ENST00000612540 CCDC83Q8IWF9 413 aa14.98□□□□□ -0.01
PRKN-210ENST00000612540 NECAB1Q8N987 351 aa14.98□□□□□ -0.01
PRKN-210ENST00000612540 ACER1Q8TDN7 264 aa14.98□□□□□ -0.01
PRKN-210ENST00000612540 ANKS1AQ92625 1134 aa14.98□□□□□ -0.01
PRKN-210ENST00000612540 ZNF274Q96GC6 653 aaPredicted RBP14.98□□□□□ -0.01
PRKN-210ENST00000612540 CLMNQ96JQ2 1002 aa14.98□□□□□ -0.01
PRKN-210ENST00000612540 SH2D4AQ9H788 454 aa14.98□□□□□ -0.01
PRKN-210ENST00000612540 AS3MTQ9HBK9 375 aa14.98□□□□□ -0.01
PRKN-210ENST00000612540 SNCAIPQ9Y6H5 919 aa14.98□□□□□ -0.01
PRKN-210ENST00000612540 CALM1P0DP23 149 aa14.97□□□□□ -0.01
PRKN-210ENST00000612540 CALM2P0DP24 149 aa14.97□□□□□ -0.01
PRKN-210ENST00000612540 CALM3P0DP25 149 aa14.97□□□□□ -0.01
PRKN-210ENST00000612540 PTPRAP18433 802 aa14.97□□□□□ -0.01
PRKN-210ENST00000612540 DGKZQ13574 1117 aa14.97□□□□□ -0.01
PRKN-210ENST00000612540 MAP3K11Q16584 847 aa14.97□□□□□ -0.01
PRKN-210ENST00000612540 RTN1Q16799 776 aa14.97□□□□□ -0.01
PRKN-210ENST00000612540 CCDC96Q2M329 555 aa14.97□□□□□ -0.01
PRKN-210ENST00000612540 RASAL3Q86YV0 1011 aa14.97□□□□□ -0.01
PRKN-210ENST00000612540 CTCFLQ8NI51 663 aaPredicted RBP14.97□□□□□ -0.01
PRKN-210ENST00000612540 NCOA5Q9HCD5 579 aaKnown RBP14.97□□□□□ -0.01
PRKN-210ENST00000612540 RNF186Q9NXI6 227 aa14.97□□□□□ -0.01
PRKN-210ENST00000612540 BAZ2BQ9UIF8 2168 aaKnown RBP14.97□□□□□ -0.01
PRKN-210ENST00000612540 MYH6P13533 1939 aa14.96□□□□□ -0.01
PRKN-210ENST00000612540 CPLX1O14810 134 aa14.96□□□□□ -0.01
PRKN-210ENST00000612540 PFKFB2O60825 505 aa14.96□□□□□ -0.01
PRKN-210ENST00000612540 NOVP48745 357 aa14.96□□□□□ -0.01
PRKN-210ENST00000612540 SLC4A3P48751 1232 aa14.96□□□□□ -0.01
PRKN-210ENST00000612540 RGS19P49795 217 aa14.96□□□□□ -0.01
PRKN-210ENST00000612540 EVCP57679 992 aa14.96□□□□□ -0.01
PRKN-210ENST00000612540 SPRYD3Q8NCJ5 442 aa14.96□□□□□ -0.01
PRKN-210ENST00000612540 GTF3C6Q969F1 213 aa14.96□□□□□ -0.01
PRKN-210ENST00000612540 OTUD5Q96G74 571 aa14.96□□□□□ -0.01
PRKN-210ENST00000612540 GOPCQ9HD26 462 aa14.96□□□□□ -0.01
PRKN-210ENST00000612540 FOXD4L1Q9NU39 408 aa14.96□□□□□ -0.01
PRKN-210ENST00000612540 HPS5Q9UPZ3 1129 aa14.96□□□□□ -0.01
PRKN-210ENST00000612540 ZHX2Q9Y6X8 837 aa14.96□□□□□ -0.01
PRKN-210ENST00000612540 A0A1W2PRG0 241 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms