RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 SPECC1LQ69YQ0 1117 aa10.5□□□□□ -0.73
SRGAP2B-204ENST00000612199 CCDC170Q8IYT3 715 aa10.5□□□□□ -0.73
SRGAP2B-204ENST00000612199 GUCA1BQ9UMX6 200 aa10.5□□□□□ -0.73
SRGAP2B-204ENST00000612199 CCNT1O60563 726 aaKnown RBP10.5□□□□□ -0.73
SRGAP2B-204ENST00000612199 HSF2BPO75031 334 aa10.5□□□□□ -0.73
SRGAP2B-204ENST00000612199 TXKP42681 527 aa10.5□□□□□ -0.73
SRGAP2B-204ENST00000612199 SMAP1Q8IYB5 467 aaPredicted RBP10.5□□□□□ -0.73
SRGAP2B-204ENST00000612199 ANLNQ9NQW6 1124 aa10.5□□□□□ -0.73
SRGAP2B-204ENST00000612199 PLCD1P51178 756 aa10.5□□□□□ -0.73
SRGAP2B-204ENST00000612199 ALKBH2Q6NS38 261 aa10.5□□□□□ -0.73
SRGAP2B-204ENST00000612199 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.5□□□□□ -0.73
SRGAP2B-204ENST00000612199 VPS54Q9P1Q0 977 aa10.5□□□□□ -0.73
SRGAP2B-204ENST00000612199 KDRP35968 1356 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 MROH5Q6ZUA9 1318 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 BRD1O95696 1058 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 KRT40Q6A162 431 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 ARHGEF25Q86VW2 580 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 WDR66Q8TBY9 1149 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 GREM2Q9H772 168 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 USP17L12C9JPN9 530 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 USP17L21D6R901 530 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 NSMCE1Q8WV22 266 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 CAPZA3Q96KX2 299 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 E7EVH7 732 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 TFAP4Q01664 338 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 RIOK1Q9BRS2 568 aaKnown RBP10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 FAM167BQ9BTA0 163 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 PAGR1Q9BTK6 254 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 NSRP1Q9H0G5 558 aaKnown RBP10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 VPS16Q9H269 839 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 PICK1Q9NRD5 415 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 BNIP3LO60238 219 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 SORBS3O60504 671 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 VIMP08670 466 aaKnown RBP10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 MKRN3Q13064 507 aaKnown RBP10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 SZRD1Q7Z422 152 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 SMCR8Q8TEV9 937 aaPredicted RBP10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 IMPG2Q9BZV3 1241 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 APBA3O96018 575 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 GTF2IP78347 998 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 DCAF17Q5H9S7 520 aaPredicted RBP10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 PNMA8AQ86V59 439 aaPredicted RBP10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 MRRFQ96E11 262 aaKnown RBP10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 VCXQ9H320 206 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 CNOT7Q9UIV1 285 aaKnown RBP10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 SSH2Q76I76 1423 aa10.49□□□□□ -0.73
SRGAP2B-204ENST00000612199 ADORA1P30542 326 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 RAD51AP2Q09MP3 1159 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 MCM6Q14566 821 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 FMNL3Q8IVF7 1028 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 NEK11Q8NG66 645 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 FAM135BQ49AJ0 1406 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 EFCAB6Q5THR3 1501 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 BRD2P25440 801 aaKnown RBP10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 C17orf53Q8N3J3 647 aaPredicted RBP10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 CCDC155Q8N6L0 562 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 SLITRK6Q9H5Y7 841 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 CTNND2Q9UQB3 1225 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 MRPL12P52815 198 aaKnown RBP10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 USH1GQ495M9 461 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 SYT10Q6XYQ8 523 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 CERS3Q8IU89 383 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 LARGE2Q8N3Y3 721 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 PNMA2Q9UL42 364 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 CUTAO60888 179 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 ADD1P35611 737 aaKnown RBP10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 ARHGAP27Q6ZUM4 889 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 CPXCR1Q8N123 301 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 RAD18Q9NS91 495 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 KDM5CP41229 1560 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 NOP56O00567 594 aaKnown RBP10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 TRMT2AQ8IZ69 625 aaKnown RBP10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 VPS52Q8N1B4 723 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 ZBTB38Q8NAP3 1195 aaPredicted RBP10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 ZBTB1Q9Y2K1 713 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 MYOM2P54296 1465 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 GRXCR2A6NFK2 248 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 TRAF5O00463 557 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 DAB2P98082 770 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 MLKLQ8NB16 471 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 MED10Q9BTT4 135 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 DSCC1Q9BVC3 393 aa10.48□□□□□ -0.73
SRGAP2B-204ENST00000612199 ZNF202O95125 648 aa10.47□□□□□ -0.73
SRGAP2B-204ENST00000612199 HSPD1P10809 573 aaKnown RBP10.47□□□□□ -0.73
SRGAP2B-204ENST00000612199 RPL13P26373 211 aaKnown RBP10.47□□□□□ -0.73
SRGAP2B-204ENST00000612199 MFSD14BQ5SR56 506 aa10.47□□□□□ -0.73
SRGAP2B-204ENST00000612199 MAEAQ7L5Y9 396 aa10.47□□□□□ -0.73
SRGAP2B-204ENST00000612199 PGBD3Q8N328 593 aa10.47□□□□□ -0.73
SRGAP2B-204ENST00000612199 DCLK2Q8N568 766 aa10.47□□□□□ -0.73
SRGAP2B-204ENST00000612199 LMBRD1Q9NUN5 540 aa10.47□□□□□ -0.73
SRGAP2B-204ENST00000612199 STK32BQ9NY57 414 aa10.47□□□□□ -0.73
SRGAP2B-204ENST00000612199 TPCN1Q9ULQ1 816 aa10.47□□□□□ -0.73
SRGAP2B-204ENST00000612199 IBTKQ9P2D0 1353 aaPredicted RBP10.47□□□□□ -0.73
SRGAP2B-204ENST00000612199 SLC1A4P43007 532 aa10.47□□□□□ -0.73
SRGAP2B-204ENST00000612199 RASAL2Q9UJF2 1139 aa10.47□□□□□ -0.73
SRGAP2B-204ENST00000612199 IGSF1Q8N6C5 1336 aa10.47□□□□□ -0.73
SRGAP2B-204ENST00000612199 AKR1B15C9JRZ8 316 aaPredicted RBP10.47□□□□□ -0.73
SRGAP2B-204ENST00000612199 H0YIN7 160 aa10.47□□□□□ -0.73
SRGAP2B-204ENST00000612199 PDE4DQ08499 809 aa10.47□□□□□ -0.73
SRGAP2B-204ENST00000612199 TTC38Q5R3I4 469 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms