RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 DDAH1O94760 285 aa18.68■□□□□ 0.58
CLTCL1-207ENST00000611723 CALM1P0DP23 149 aa18.68■□□□□ 0.58
CLTCL1-207ENST00000611723 CALM2P0DP24 149 aa18.68■□□□□ 0.58
CLTCL1-207ENST00000611723 CALM3P0DP25 149 aa18.68■□□□□ 0.58
CLTCL1-207ENST00000611723 TROAPQ12815 778 aa18.68■□□□□ 0.58
CLTCL1-207ENST00000611723 CUL4AQ13619 759 aa18.68■□□□□ 0.58
CLTCL1-207ENST00000611723 PRKG1Q13976 671 aa18.68■□□□□ 0.58
CLTCL1-207ENST00000611723 PPP2R5BQ15173 497 aa18.68■□□□□ 0.58
CLTCL1-207ENST00000611723 ZNF654Q8IZM8 581 aa18.68■□□□□ 0.58
CLTCL1-207ENST00000611723 ZKSCAN4Q969J2 545 aaPredicted RBP18.68■□□□□ 0.58
CLTCL1-207ENST00000611723 CAPNS2Q96L46 248 aa18.68■□□□□ 0.58
CLTCL1-207ENST00000611723 WDR18Q9BV38 432 aa18.68■□□□□ 0.58
CLTCL1-207ENST00000611723 PICK1Q9NRD5 415 aa18.68■□□□□ 0.58
CLTCL1-207ENST00000611723 HPS5Q9UPZ3 1129 aa18.68■□□□□ 0.58
CLTCL1-207ENST00000611723 NID2Q14112 1375 aa18.68■□□□□ 0.58
CLTCL1-207ENST00000611723 ZBTB43O43298 467 aa18.67■□□□□ 0.58
CLTCL1-207ENST00000611723 PTPRAP18433 802 aa18.67■□□□□ 0.58
CLTCL1-207ENST00000611723 NOL8Q76FK4 1167 aaKnown RBP18.67■□□□□ 0.58
CLTCL1-207ENST00000611723 CLEC10AQ8IUN9 316 aa18.67■□□□□ 0.58
CLTCL1-207ENST00000611723 ANKRD13AQ8IZ07 590 aa18.67■□□□□ 0.58
CLTCL1-207ENST00000611723 PNMA1Q8ND90 353 aa18.67■□□□□ 0.58
CLTCL1-207ENST00000611723 CHMP4CQ96CF2 233 aa18.67■□□□□ 0.58
CLTCL1-207ENST00000611723 ARHGEF10LQ9HCE6 1279 aa18.67■□□□□ 0.58
CLTCL1-207ENST00000611723 TMX2Q9Y320 296 aa18.67■□□□□ 0.58
CLTCL1-207ENST00000611723 A0A1W2PRG0 241 aa18.66■□□□□ 0.58
CLTCL1-207ENST00000611723 CELF2O95319 508 aaKnown RBP18.66■□□□□ 0.58
CLTCL1-207ENST00000611723 LARGE1O95461 756 aa18.66■□□□□ 0.58
CLTCL1-207ENST00000611723 VGLL4Q14135 290 aa18.66■□□□□ 0.58
CLTCL1-207ENST00000611723 SLKQ9H2G2 1235 aaPredicted RBP18.66■□□□□ 0.58
CLTCL1-207ENST00000611723 GBA2Q9HCG7 927 aaPredicted RBP18.66■□□□□ 0.58
CLTCL1-207ENST00000611723 CSADQ9Y600 493 aa18.66■□□□□ 0.58
CLTCL1-207ENST00000611723 SNCAIPQ9Y6H5 919 aa18.66■□□□□ 0.58
CLTCL1-207ENST00000611723 TRPM7Q96QT4 1865 aa18.66■□□□□ 0.58
CLTCL1-207ENST00000611723 GOLGA8BA8MQT2 603 aa18.65■□□□□ 0.58
CLTCL1-207ENST00000611723 AOC2O75106 756 aa18.65■□□□□ 0.58
CLTCL1-207ENST00000611723 SNHG28P0DPA3 235 aa18.65■□□□□ 0.58
CLTCL1-207ENST00000611723 SCRN1Q12765 414 aa18.65■□□□□ 0.58
CLTCL1-207ENST00000611723 TTLL12Q14166 644 aaPredicted RBP18.65■□□□□ 0.58
CLTCL1-207ENST00000611723 CST9Q5W186 159 aa18.65■□□□□ 0.58
CLTCL1-207ENST00000611723 MOB2Q70IA6 237 aa18.65■□□□□ 0.58
CLTCL1-207ENST00000611723 C2orf69Q8N8R5 385 aa18.65■□□□□ 0.58
CLTCL1-207ENST00000611723 FANCBQ8NB91 859 aa18.65■□□□□ 0.58
CLTCL1-207ENST00000611723 GMCL1P1Q8NEA9 526 aa18.65■□□□□ 0.58
CLTCL1-207ENST00000611723 ACER1Q8TDN7 264 aa18.65■□□□□ 0.58
CLTCL1-207ENST00000611723 GTF3C6Q969F1 213 aa18.65■□□□□ 0.58
CLTCL1-207ENST00000611723 AS3MTQ9HBK9 375 aa18.65■□□□□ 0.58
CLTCL1-207ENST00000611723 FAM217BQ9NTX9 383 aaPredicted RBP18.65■□□□□ 0.58
CLTCL1-207ENST00000611723 PAPPA2Q9BXP8 1791 aa18.65■□□□□ 0.58
CLTCL1-207ENST00000611723 ATAD5Q96QE3 1844 aa18.65■□□□□ 0.58
CLTCL1-207ENST00000611723 DOCK1Q14185 1865 aa18.65■□□□□ 0.58
CLTCL1-207ENST00000611723 UBE2Q2LH0YL09 131 aa18.64■□□□□ 0.57
CLTCL1-207ENST00000611723 METAP2P50579 478 aaKnown RBP eCLIP18.64■□□□□ 0.57
CLTCL1-207ENST00000611723 ATP2B2Q01814 1243 aa18.64■□□□□ 0.57
CLTCL1-207ENST00000611723 MLLT1Q03111 559 aaPredicted RBP18.64■□□□□ 0.57
CLTCL1-207ENST00000611723 ST3GAL1Q11201 340 aa18.64■□□□□ 0.57
CLTCL1-207ENST00000611723 INTS4Q96HW7 963 aaKnown RBP18.64■□□□□ 0.57
CLTCL1-207ENST00000611723 IPO9Q96P70 1041 aaKnown RBP18.64■□□□□ 0.57
CLTCL1-207ENST00000611723 SH2D4AQ9H788 454 aa18.64■□□□□ 0.57
CLTCL1-207ENST00000611723 MYH4Q9Y623 1939 aa18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 CASP8AP2Q9UKL3 1982 aa18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 CCDC196A0A1B0GTZ2 297 aa18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 DHX16O60231 1041 aaKnown RBP18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 ECE1P42892 770 aa18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 CCT2P78371 535 aaKnown RBP18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 GRM4Q14833 912 aa18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 RTN1Q16799 776 aa18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 MICU3Q86XE3 530 aa18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 ERO1BQ86YB8 467 aa18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 LRRC47Q8N1G4 583 aaKnown RBP18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 NECAB1Q8N987 351 aa18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 ZNF280CQ8ND82 737 aa18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 MYL10Q9BUA6 226 aa18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 KIAA1683Q9H0B3 1180 aa18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 ZNF408Q9H9D4 720 aa18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 RBM28Q9NW13 759 aaKnown RBP18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 NAP1L2Q9ULW6 460 aaPredicted RBP18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 AFG3L2Q9Y4W6 797 aa18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 ZHX2Q9Y6X8 837 aa18.63■□□□□ 0.57
CLTCL1-207ENST00000611723 PALM3A6NDB9 673 aaPredicted RBP18.62■□□□□ 0.57
CLTCL1-207ENST00000611723 GOLGA8AA7E2F4 631 aa18.62■□□□□ 0.57
CLTCL1-207ENST00000611723 F5H6K3 240 aa18.62■□□□□ 0.57
CLTCL1-207ENST00000611723 PDHBP11177 359 aa18.62■□□□□ 0.57
CLTCL1-207ENST00000611723 CDC27P30260 824 aa18.62■□□□□ 0.57
CLTCL1-207ENST00000611723 KIF5BP33176 963 aa18.62■□□□□ 0.57
CLTCL1-207ENST00000611723 PPATQ06203 517 aa18.62■□□□□ 0.57
CLTCL1-207ENST00000611723 KLRC3Q07444 240 aa18.62■□□□□ 0.57
CLTCL1-207ENST00000611723 STK3Q13188 491 aa18.62■□□□□ 0.57
CLTCL1-207ENST00000611723 CCDC84Q86UT8 332 aaPredicted RBP18.62■□□□□ 0.57
CLTCL1-207ENST00000611723 CTCFLQ8NI51 663 aaPredicted RBP18.62■□□□□ 0.57
CLTCL1-207ENST00000611723 NUP133Q8WUM0 1156 aa18.62■□□□□ 0.57
CLTCL1-207ENST00000611723 DCAF4Q8WV16 495 aa18.62■□□□□ 0.57
CLTCL1-207ENST00000611723 GMCL1Q96IK5 515 aa18.62■□□□□ 0.57
CLTCL1-207ENST00000611723 LLPHQ9BRT6 129 aaKnown RBP18.62■□□□□ 0.57
CLTCL1-207ENST00000611723 SPDYE5A6NIY4 337 aa18.61■□□□□ 0.57
CLTCL1-207ENST00000611723 C19orf81C9J6K1 198 aa18.61■□□□□ 0.57
CLTCL1-207ENST00000611723 USP17L10C9JJH3 530 aa18.61■□□□□ 0.57
CLTCL1-207ENST00000611723 RXRAP19793 462 aa18.61■□□□□ 0.57
CLTCL1-207ENST00000611723 ADD1P35611 737 aaKnown RBP18.61■□□□□ 0.57
CLTCL1-207ENST00000611723 GNAQP50148 359 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms