RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 LHX8Q68G74 356 aa21.18■□□□□ 0.98
MUC1-224ENST00000611577 POTEEQ6S8J3 1075 aa21.18■□□□□ 0.98
MUC1-224ENST00000611577 RILPL2Q969X0 211 aa21.18■□□□□ 0.98
MUC1-224ENST00000611577 OSBPL3Q9H4L5 887 aa21.18■□□□□ 0.98
MUC1-224ENST00000611577 TCRBV5S4A2TA0A5A2 114 aa21.17■□□□□ 0.98
MUC1-224ENST00000611577 RNF113AO15541 343 aaKnown RBP21.17■□□□□ 0.98
MUC1-224ENST00000611577 CRNKL1Q9BZJ0 848 aaKnown RBP21.17■□□□□ 0.98
MUC1-224ENST00000611577 PDE4AP27815 886 aa21.16■□□□□ 0.98
MUC1-224ENST00000611577 MAP2K5Q13163 448 aa21.16■□□□□ 0.98
MUC1-224ENST00000611577 LRRC26Q2I0M4 334 aa21.16■□□□□ 0.98
MUC1-224ENST00000611577 SLFNL1Q499Z3 407 aa21.16■□□□□ 0.98
MUC1-224ENST00000611577 WDR78Q5VTH9 848 aa21.16■□□□□ 0.98
MUC1-224ENST00000611577 PPP4R2Q9NY27 417 aa21.16■□□□□ 0.98
MUC1-224ENST00000611577 RABGAP1Q9Y3P9 1069 aa21.16■□□□□ 0.98
MUC1-224ENST00000611577 USP17L15C9J2P7 530 aa21.15■□□□□ 0.98
MUC1-224ENST00000611577 USP17L13C9JLJ4 530 aa21.15■□□□□ 0.98
MUC1-224ENST00000611577 USP17L11C9JVI0 530 aa21.15■□□□□ 0.98
MUC1-224ENST00000611577 USP17L18D6R9N7 530 aa21.15■□□□□ 0.98
MUC1-224ENST00000611577 USP17L22D6RA61 530 aa21.15■□□□□ 0.98
MUC1-224ENST00000611577 USP17L17D6RBQ6 530 aa21.15■□□□□ 0.98
MUC1-224ENST00000611577 USP17L19D6RCP7 530 aa21.15■□□□□ 0.98
MUC1-224ENST00000611577 USP17L20D6RJB6 530 aa21.15■□□□□ 0.98
MUC1-224ENST00000611577 CNMDO75829 334 aa21.15■□□□□ 0.98
MUC1-224ENST00000611577 MBD4O95243 580 aa21.15■□□□□ 0.98
MUC1-224ENST00000611577 CCNA1P78396 465 aa21.15■□□□□ 0.98
MUC1-224ENST00000611577 USP17L24Q0WX57 530 aa21.15■□□□□ 0.98
MUC1-224ENST00000611577 APPBP2Q92624 585 aa21.15■□□□□ 0.98
MUC1-224ENST00000611577 C12orf42Q96LP6 360 aa21.15■□□□□ 0.98
MUC1-224ENST00000611577 ARMT1Q9H993 441 aa21.15■□□□□ 0.98
MUC1-224ENST00000611577 MYH1P12882 1939 aa21.15■□□□□ 0.98
MUC1-224ENST00000611577 MDM2Q00987 491 aaPredicted RBP21.14■□□□□ 0.97
MUC1-224ENST00000611577 RAB3GAP1Q15042 981 aa21.14■□□□□ 0.97
MUC1-224ENST00000611577 TATDN1Q6P1N9 297 aa21.14■□□□□ 0.97
MUC1-224ENST00000611577 LCORLQ8N3X6 602 aa21.14■□□□□ 0.97
MUC1-224ENST00000611577 DDRGK1Q96HY6 314 aa21.14■□□□□ 0.97
MUC1-224ENST00000611577 RIOK1Q9BRS2 568 aaKnown RBP21.14■□□□□ 0.97
MUC1-224ENST00000611577 SERPINB13Q9UIV8 391 aa21.14■□□□□ 0.97
MUC1-224ENST00000611577 STXBP5LQ9Y2K9 1186 aa21.14■□□□□ 0.97
MUC1-224ENST00000611577 NAV1Q8NEY1 1877 aa21.13■□□□□ 0.97
MUC1-224ENST00000611577 CHGBP05060 677 aa21.13■□□□□ 0.97
MUC1-224ENST00000611577 USP14P54578 494 aa21.13■□□□□ 0.97
MUC1-224ENST00000611577 MFSD14CQ5VZR4 134 aa21.13■□□□□ 0.97
MUC1-224ENST00000611577 EHD4Q9H223 541 aa21.13■□□□□ 0.97
MUC1-224ENST00000611577 MTMR10Q9NXD2 777 aa21.13■□□□□ 0.97
MUC1-224ENST00000611577 FLRT1Q9NZU1 646 aa21.13■□□□□ 0.97
MUC1-224ENST00000611577 VCAM1P19320 739 aa21.12■□□□□ 0.97
MUC1-224ENST00000611577 ABCB5Q2M3G0 1257 aa21.12■□□□□ 0.97
MUC1-224ENST00000611577 CATSPERGQ6ZRH7 1159 aa21.12■□□□□ 0.97
MUC1-224ENST00000611577 ACER1Q8TDN7 264 aa21.12■□□□□ 0.97
MUC1-224ENST00000611577 PUS7LQ9H0K6 701 aaKnown RBP21.12■□□□□ 0.97
MUC1-224ENST00000611577 FRMPD3Q5JV73 1810 aa21.11■□□□□ 0.97
MUC1-224ENST00000611577 SLC15A5A6NIM6 579 aa21.11■□□□□ 0.97
MUC1-224ENST00000611577 PTPREP23469 700 aa21.11■□□□□ 0.97
MUC1-224ENST00000611577 CERKLQ49MI3 558 aaPredicted RBP21.11■□□□□ 0.97
MUC1-224ENST00000611577 TTC22Q5TAA0 569 aa21.11■□□□□ 0.97
MUC1-224ENST00000611577 SENP6Q9GZR1 1112 aaPredicted RBP21.11■□□□□ 0.97
MUC1-224ENST00000611577 KIAA1683Q9H0B3 1180 aa21.11■□□□□ 0.97
MUC1-224ENST00000611577 SLC4A4Q9Y6R1 1079 aa21.11■□□□□ 0.97
MUC1-224ENST00000611577 IVNS1ABPQ9Y6Y0 642 aa21.11■□□□□ 0.97
MUC1-224ENST00000611577 CNGA1P29973 690 aa21.1■□□□□ 0.97
MUC1-224ENST00000611577 ATP2B2Q01814 1243 aa21.1■□□□□ 0.97
MUC1-224ENST00000611577 TTC6Q86TZ1 520 aa21.1■□□□□ 0.97
MUC1-224ENST00000611577 AMOTL1Q8IY63 956 aa21.1■□□□□ 0.97
MUC1-224ENST00000611577 SDR42E1Q8WUS8 393 aa21.1■□□□□ 0.97
MUC1-224ENST00000611577 OSBP2Q969R2 916 aa21.1■□□□□ 0.97
MUC1-224ENST00000611577 CABP5Q9NP86 173 aa21.1■□□□□ 0.97
MUC1-224ENST00000611577 BTBD7Q9P203 1132 aa21.1■□□□□ 0.97
MUC1-224ENST00000611577 DDX20Q9UHI6 824 aaKnown RBP21.1■□□□□ 0.97
MUC1-224ENST00000611577 POLR3DP05423 398 aaPredicted RBP21.09■□□□□ 0.97
MUC1-224ENST00000611577 GRB14Q14449 540 aa21.09■□□□□ 0.97
MUC1-224ENST00000611577 LBX2Q6XYB7 198 aa21.09■□□□□ 0.97
MUC1-224ENST00000611577 RPAP3Q9H6T3 665 aaPredicted RBP21.09■□□□□ 0.97
MUC1-224ENST00000611577 MCM9Q9NXL9 1143 aa21.09■□□□□ 0.97
MUC1-224ENST00000611577 SPDYE16A6NNV3 312 aaPredicted RBP21.08■□□□□ 0.97
MUC1-224ENST00000611577 GPAA1O43292 621 aa21.08■□□□□ 0.97
MUC1-224ENST00000611577 MSCO60682 206 aa21.08■□□□□ 0.97
MUC1-224ENST00000611577 HOXC6P09630 235 aa21.08■□□□□ 0.97
MUC1-224ENST00000611577 ATN1P54259 1190 aaPredicted RBP21.08■□□□□ 0.97
MUC1-224ENST00000611577 ZMYM1Q5SVZ6 1142 aa21.08■□□□□ 0.97
MUC1-224ENST00000611577 LBHD1Q9BQE6 289 aaPredicted RBP21.08■□□□□ 0.97
MUC1-224ENST00000611577 DIAPH3Q9NSV4 1193 aa21.08■□□□□ 0.97
MUC1-224ENST00000611577 ATP8A2Q9NTI2 1148 aa21.08■□□□□ 0.97
MUC1-224ENST00000611577 BAZ2AQ9UIF9 1905 aaKnown RBP21.08■□□□□ 0.96
MUC1-224ENST00000611577 DNAH12Q6ZR08 3092 aa21.07■□□□□ 0.96
MUC1-224ENST00000611577 M0R2C6 588 aa21.07■□□□□ 0.96
MUC1-224ENST00000611577 HIP1O00291 1037 aa21.07■□□□□ 0.96
MUC1-224ENST00000611577 PRKAB2O43741 272 aa21.07■□□□□ 0.96
MUC1-224ENST00000611577 APPP05067 770 aa21.07■□□□□ 0.96
MUC1-224ENST00000611577 GNAT2P19087 354 aa21.07■□□□□ 0.96
MUC1-224ENST00000611577 CYP2C19P33261 490 aa21.07■□□□□ 0.96
MUC1-224ENST00000611577 SHMT1P34896 483 aa21.07■□□□□ 0.96
MUC1-224ENST00000611577 TICAM2Q86XR7 235 aa21.07■□□□□ 0.96
MUC1-224ENST00000611577 NPLOC4Q8TAT6 608 aa21.07■□□□□ 0.96
MUC1-224ENST00000611577 LPAR1Q92633 364 aa21.07■□□□□ 0.96
MUC1-224ENST00000611577 PLCD1P51178 756 aa21.06■□□□□ 0.96
MUC1-224ENST00000611577 STRBPQ96SI9 672 aaKnown RBP21.06■□□□□ 0.96
MUC1-224ENST00000611577 SEC62Q99442 399 aaKnown RBP21.06■□□□□ 0.96
MUC1-224ENST00000611577 HELLSQ9NRZ9 838 aa21.06■□□□□ 0.96
MUC1-224ENST00000611577 UNC80Q8N2C7 3258 aa21.06■□□□□ 0.96
MUC1-224ENST00000611577 DNM1LO00429 736 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms