RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 ITPRIPQ8IWB1 547 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 CCAR2Q8N163 923 aaKnown RBP5.28□□□□□ -1.56
HDDC2-208ENST00000609021 ARHGAP18Q8N392 663 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 SP7Q8TDD2 431 aaPredicted RBP5.28□□□□□ -1.56
HDDC2-208ENST00000609021 MRRFQ96E11 262 aaKnown RBP5.28□□□□□ -1.56
HDDC2-208ENST00000609021 NDEL1Q9GZM8 345 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 ZCWPW1Q9H0M4 648 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 PLEKHA4Q9H4M7 779 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 DCAF16Q9NXF7 216 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 HOXC10Q9NYD6 342 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 MIS18AQ9NYP9 233 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 TUBGCP4Q9UGJ1 667 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 PRAG1Q86YV5 1406 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 SPTLC2O15270 562 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 SART1O43290 800 aaKnown RBP5.28□□□□□ -1.56
HDDC2-208ENST00000609021 RAPGEF3O95398 923 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 RPL17P18621 184 aaKnown RBP5.28□□□□□ -1.56
HDDC2-208ENST00000609021 ENDOUP21128 410 aaKnown RBP5.28□□□□□ -1.56
HDDC2-208ENST00000609021 HNRNPMP52272 730 aaKnown RBP eCLIP5.28□□□□□ -1.56
HDDC2-208ENST00000609021 CCDC144BQ3MJ40 725 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 C10orf76Q5T2E6 689 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 GALNT15Q8N3T1 639 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 SMC1BQ8NDV3 1235 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 LRRC45Q96CN5 670 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 ABHD8Q96I13 439 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 MYO1AQ9UBC5 1043 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 CORO1CQ9ULV4 474 aaPredicted RBP5.28□□□□□ -1.56
HDDC2-208ENST00000609021 PLEKHH1Q9ULM0 1364 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 EVA1CP58658 441 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 ITGA7Q13683 1181 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 CCDC40Q4G0X9 1142 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 DAAM2Q86T65 1068 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 REM2Q8IYK8 340 aaPredicted RBP5.28□□□□□ -1.56
HDDC2-208ENST00000609021 CNNM3Q8NE01 707 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 MAIP1Q8WWC4 291 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 IER2Q9BTL4 223 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 LNPKQ9C0E8 428 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 RTEL1Q9NZ71 1219 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 EVLQ9UI08 416 aaPredicted RBP5.28□□□□□ -1.56
HDDC2-208ENST00000609021 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.27□□□□□ -1.57
HDDC2-208ENST00000609021 LRRC10BA6NIK2 292 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 RASSF10A6NK89 507 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 LRRIQ3A6PVS8 624 aaPredicted RBP5.27□□□□□ -1.57
HDDC2-208ENST00000609021 SPECC1L-ADORA2AF8WAN1 911 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 TBC1D12O60347 775 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 CHGAP10645 457 aaKnown RBP5.27□□□□□ -1.57
HDDC2-208ENST00000609021 EIF2S2P20042 333 aaKnown RBP5.27□□□□□ -1.57
HDDC2-208ENST00000609021 TCF7P36402 384 aaPredicted RBP5.27□□□□□ -1.57
HDDC2-208ENST00000609021 SMTNP53814 917 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 KLC1Q07866 573 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 IFFO1Q0D2I5 559 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 PSMD6Q15008 389 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 VPS53Q5VIR6 699 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 PI16Q6UXB8 463 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 BRAPQ7Z569 592 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 RNF10Q8N5U6 811 aaKnown RBP5.27□□□□□ -1.57
HDDC2-208ENST00000609021 KIAA1958Q8N8K9 716 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 ZFAND2BQ8WV99 257 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 TPCN1Q9ULQ1 816 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 ZNF510Q9Y2H8 683 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 TSC22D4Q9Y3Q8 395 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 ANKRD30AQ9BXX3 1397 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 CHD2O14647 1828 aaKnown RBP5.27□□□□□ -1.57
HDDC2-208ENST00000609021 TRIM43BA6NCK2 446 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 MYO1FO00160 1098 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 TEX28O15482 410 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 PHACTR2O75167 634 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 GFPT2O94808 682 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 BCRP11274 1271 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 PTGS1P23219 599 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 NFKBIAP25963 317 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 NLRP5P59047 1200 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 EIF4G2P78344 907 aaKnown RBP eCLIP5.27□□□□□ -1.57
HDDC2-208ENST00000609021 MAP3K9P80192 1104 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 TNIP1Q15025 636 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 NUGGCQ68CJ6 796 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 MIS18BP1Q6P0N0 1132 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 CCDC89Q8N998 374 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 CACTINQ8WUQ7 758 aaKnown RBP5.27□□□□□ -1.57
HDDC2-208ENST00000609021 GOLGA1Q92805 767 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 LMBRD1Q9NUN5 540 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 CFDP1Q9UEE9 299 aaPredicted RBP5.27□□□□□ -1.57
HDDC2-208ENST00000609021 ZNF148Q9UQR1 794 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 TRPC6Q9Y210 931 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 SH3GLB1Q9Y371 365 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 MED14O60244 1454 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 NALCNQ8IZF0 1738 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 TMEM247A6NEH6 219 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 SNX2O60749 519 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 SEC31AO94979 1220 aaKnown RBP5.27□□□□□ -1.57
HDDC2-208ENST00000609021 LDHBP07195 334 aaKnown RBP5.27□□□□□ -1.57
HDDC2-208ENST00000609021 S100A1P23297 94 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 HOXD12P35452 270 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 SNX16P57768 344 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 BASP1P80723 227 aaKnown RBP5.27□□□□□ -1.57
HDDC2-208ENST00000609021 LRP8Q14114 963 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 NFE2L2Q16236 605 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 HDXQ7Z353 690 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 ACMSDQ8TDX5 336 aa5.27□□□□□ -1.57
HDDC2-208ENST00000609021 ABTB1Q969K4 478 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms