RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 MAGEB6Q8N7X4 407 aa23.22■■□□□ 1.31
SGMS1-208ENST00000608287 C12orf42Q96LP6 360 aa23.22■■□□□ 1.31
SGMS1-208ENST00000608287 BOLA2Q9H3K6 86 aa23.22■■□□□ 1.31
SGMS1-208ENST00000608287 SLC5A4Q9NY91 659 aa23.22■■□□□ 1.31
SGMS1-208ENST00000608287 SPTBN5Q9NRC6 3674 aaKnown RBP23.21■■□□□ 1.31
SGMS1-208ENST00000608287 GOLIM4O00461 696 aa23.21■■□□□ 1.31
SGMS1-208ENST00000608287 PPP4CP60510 307 aa23.21■■□□□ 1.31
SGMS1-208ENST00000608287 RNPC3Q96LT9 517 aaKnown RBP23.21■■□□□ 1.31
SGMS1-208ENST00000608287 SIPA1L1O43166 1804 aa23.2■■□□□ 1.3
SGMS1-208ENST00000608287 CYBAP13498 195 aa23.2■■□□□ 1.3
SGMS1-208ENST00000608287 ATP5JP18859 108 aa23.2■■□□□ 1.3
SGMS1-208ENST00000608287 LBX2Q6XYB7 198 aa23.2■■□□□ 1.3
SGMS1-208ENST00000608287 PDLIM7Q9NR12 457 aa23.2■■□□□ 1.3
SGMS1-208ENST00000608287 EMILIN3Q9NT22 766 aa23.2■■□□□ 1.3
SGMS1-208ENST00000608287 FLRT1Q9NZU1 646 aa23.2■■□□□ 1.3
SGMS1-208ENST00000608287 LAMA2P24043 3122 aaKnown RBP23.2■■□□□ 1.3
SGMS1-208ENST00000608287 GDF11O95390 407 aa23.19■■□□□ 1.3
SGMS1-208ENST00000608287 DYNLL1P63167 89 aaKnown RBP23.19■■□□□ 1.3
SGMS1-208ENST00000608287 GJC2Q5T442 439 aaPredicted RBP23.19■■□□□ 1.3
SGMS1-208ENST00000608287 OLFML2BQ68BL8 750 aa23.19■■□□□ 1.3
SGMS1-208ENST00000608287 DPP9Q86TI2 863 aa23.19■■□□□ 1.3
SGMS1-208ENST00000608287 MIGA1Q8NAN2 632 aa23.19■■□□□ 1.3
SGMS1-208ENST00000608287 TACC3Q9Y6A5 838 aa23.19■■□□□ 1.3
SGMS1-208ENST00000608287 FOCADQ5VW36 1801 aa23.18■■□□□ 1.3
SGMS1-208ENST00000608287 ZNF236Q9UL36 1845 aa23.18■■□□□ 1.3
SGMS1-208ENST00000608287 SEPT4O43236 478 aa23.18■■□□□ 1.3
SGMS1-208ENST00000608287 STRNO43815 780 aa23.18■■□□□ 1.3
SGMS1-208ENST00000608287 TRIM60Q495X7 471 aa23.18■■□□□ 1.3
SGMS1-208ENST00000608287 TGFBRAP1Q8WUH2 860 aa23.18■■□□□ 1.3
SGMS1-208ENST00000608287 PAG1Q9NWQ8 432 aa23.18■■□□□ 1.3
SGMS1-208ENST00000608287 SUPT16HQ9Y5B9 1047 aaKnown RBP23.18■■□□□ 1.3
SGMS1-208ENST00000608287 FLT1P17948 1338 aa23.17■■□□□ 1.3
SGMS1-208ENST00000608287 CYP2C19P33261 490 aa23.17■■□□□ 1.3
SGMS1-208ENST00000608287 SLC9C2Q5TAH2 1124 aa23.17■■□□□ 1.3
SGMS1-208ENST00000608287 TMED8Q6PL24 325 aaPredicted RBP23.17■■□□□ 1.3
SGMS1-208ENST00000608287 HAUS7Q99871 368 aa23.17■■□□□ 1.3
SGMS1-208ENST00000608287 CDK5RAP2Q96SN8 1893 aa23.17■■□□□ 1.3
SGMS1-208ENST00000608287 DNAH12Q6ZR08 3092 aa23.16■■□□□ 1.3
SGMS1-208ENST00000608287 CATSPERGQ6ZRH7 1159 aa23.16■■□□□ 1.3
SGMS1-208ENST00000608287 CERS3Q8IU89 383 aa23.16■■□□□ 1.3
SGMS1-208ENST00000608287 MAPKAPK5Q8IW41 473 aa23.16■■□□□ 1.3
SGMS1-208ENST00000608287 ATXN2LQ8WWM7 1075 aaKnown RBP23.16■■□□□ 1.3
SGMS1-208ENST00000608287 GPATCH3Q96I76 525 aa23.16■■□□□ 1.3
SGMS1-208ENST00000608287 DNAJC18Q9H819 358 aa23.16■■□□□ 1.3
SGMS1-208ENST00000608287 ECHDC1Q9NTX5 307 aa23.16■■□□□ 1.3
SGMS1-208ENST00000608287 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.15■■□□□ 1.3
SGMS1-208ENST00000608287 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.15■■□□□ 1.3
SGMS1-208ENST00000608287 CNMDO75829 334 aa23.15■■□□□ 1.3
SGMS1-208ENST00000608287 PDE6AP16499 860 aa23.15■■□□□ 1.3
SGMS1-208ENST00000608287 PLA2G5P39877 138 aa23.15■■□□□ 1.3
SGMS1-208ENST00000608287 AAMPQ13685 434 aa23.15■■□□□ 1.3
SGMS1-208ENST00000608287 FAM122AQ96E09 287 aa23.15■■□□□ 1.3
SGMS1-208ENST00000608287 EYSQ5T1H1 3165 aa23.15■■□□□ 1.3
SGMS1-208ENST00000608287 MYCNP04198 464 aaPredicted RBP23.14■■□□□ 1.29
SGMS1-208ENST00000608287 CLTBP09497 229 aa23.14■■□□□ 1.29
SGMS1-208ENST00000608287 IL27Q8NEV9 243 aa23.14■■□□□ 1.29
SGMS1-208ENST00000608287 EXOC6Q8TAG9 804 aa23.14■■□□□ 1.29
SGMS1-208ENST00000608287 NPLOC4Q8TAT6 608 aa23.14■■□□□ 1.29
SGMS1-208ENST00000608287 GAS2L1Q99501 681 aaPredicted RBP23.14■■□□□ 1.29
SGMS1-208ENST00000608287 KIAA1683Q9H0B3 1180 aa23.14■■□□□ 1.29
SGMS1-208ENST00000608287 ZNF532Q9HCE3 1301 aa23.13■■□□□ 1.29
SGMS1-208ENST00000608287 GH2P01242 217 aa23.13■■□□□ 1.29
SGMS1-208ENST00000608287 USP5P45974 858 aa23.13■■□□□ 1.29
SGMS1-208ENST00000608287 CCDC174Q6PII3 467 aa23.13■■□□□ 1.29
SGMS1-208ENST00000608287 TRPV1Q8NER1 839 aa23.13■■□□□ 1.29
SGMS1-208ENST00000608287 ZBTB47Q9UFB7 747 aaPredicted RBP23.13■■□□□ 1.29
SGMS1-208ENST00000608287 PALD1Q9ULE6 856 aa23.13■■□□□ 1.29
SGMS1-208ENST00000608287 PRUNE2Q8WUY3 3088 aa23.13■■□□□ 1.29
SGMS1-208ENST00000608287 MAGEB6P1A0A0J9YX57 407 aa23.12■■□□□ 1.29
SGMS1-208ENST00000608287 IGHA2P01877 340 aa23.12■■□□□ 1.29
SGMS1-208ENST00000608287 RAG1P15918 1043 aa23.12■■□□□ 1.29
SGMS1-208ENST00000608287 VCAM1P19320 739 aa23.12■■□□□ 1.29
SGMS1-208ENST00000608287 DNAJB2P25686 324 aa23.12■■□□□ 1.29
SGMS1-208ENST00000608287 ADCYAP1R1P41586 468 aa23.12■■□□□ 1.29
SGMS1-208ENST00000608287 JAG1P78504 1218 aa23.12■■□□□ 1.29
SGMS1-208ENST00000608287 FPGSQ05932 587 aa23.12■■□□□ 1.29
SGMS1-208ENST00000608287 HDAC1Q13547 482 aaPredicted RBP23.12■■□□□ 1.29
SGMS1-208ENST00000608287 ZYXQ15942 572 aaKnown RBP23.12■■□□□ 1.29
SGMS1-208ENST00000608287 TSHZ3Q63HK5 1081 aa23.12■■□□□ 1.29
SGMS1-208ENST00000608287 POTEEQ6S8J3 1075 aa23.12■■□□□ 1.29
SGMS1-208ENST00000608287 SHCBP1Q8NEM2 672 aa23.12■■□□□ 1.29
SGMS1-208ENST00000608287 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.12■■□□□ 1.295e-6■■■■□ 23.1
SGMS1-208ENST00000608287 SAP30BPQ9UHR5 308 aaKnown RBP23.12■■□□□ 1.29
SGMS1-208ENST00000608287 NRBP1Q9UHY1 535 aa23.12■■□□□ 1.29
SGMS1-208ENST00000608287 TRIM43BA6NCK2 446 aa23.11■■□□□ 1.29
SGMS1-208ENST00000608287 ADORA2AP29274 412 aa23.11■■□□□ 1.29
SGMS1-208ENST00000608287 LRRC41Q15345 812 aa23.11■■□□□ 1.29
SGMS1-208ENST00000608287 TRIM43Q96BQ3 446 aaPredicted RBP23.11■■□□□ 1.29
SGMS1-208ENST00000608287 ZNF576Q9H609 170 aa23.11■■□□□ 1.29
SGMS1-208ENST00000608287 CABP5Q9NP86 173 aa23.11■■□□□ 1.29
SGMS1-208ENST00000608287 THEGQ9P2T0 379 aa23.11■■□□□ 1.29
SGMS1-208ENST00000608287 TCRBV5S4A2TA0A5A2 114 aa23.1■■□□□ 1.29
SGMS1-208ENST00000608287 SPDYE16A6NNV3 312 aaPredicted RBP23.1■■□□□ 1.29
SGMS1-208ENST00000608287 TLE2Q04725 743 aa23.1■■□□□ 1.29
SGMS1-208ENST00000608287 GRIN2CQ14957 1233 aa23.1■■□□□ 1.29
SGMS1-208ENST00000608287 RAB3GAP1Q15042 981 aa23.1■■□□□ 1.29
SGMS1-208ENST00000608287 ANKRD45Q5TZF3 282 aa23.1■■□□□ 1.29
SGMS1-208ENST00000608287 RNF180Q86T96 592 aa23.1■■□□□ 1.29
SGMS1-208ENST00000608287 RIOK1Q9BRS2 568 aaKnown RBP23.1■■□□□ 1.29
SGMS1-208ENST00000608287 HOXC10Q9NYD6 342 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms