RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 USP17L18D6R9N7 530 aa16.81■□□□□ 0.28
CTSA-219ENST00000607841 USP17L22D6RA61 530 aa16.81■□□□□ 0.28
CTSA-219ENST00000607841 USP17L17D6RBQ6 530 aa16.81■□□□□ 0.28
CTSA-219ENST00000607841 USP17L19D6RCP7 530 aa16.81■□□□□ 0.28
CTSA-219ENST00000607841 USP17L20D6RJB6 530 aa16.81■□□□□ 0.28
CTSA-219ENST00000607841 E7EWF7 191 aa16.81■□□□□ 0.28
CTSA-219ENST00000607841 SLC27A2O14975 620 aa16.81■□□□□ 0.28
CTSA-219ENST00000607841 KDM4AO75164 1064 aa16.81■□□□□ 0.28
CTSA-219ENST00000607841 ZKSCAN1P17029 563 aaPredicted RBP16.81■□□□□ 0.28
CTSA-219ENST00000607841 VCAM1P19320 739 aa16.81■□□□□ 0.28
CTSA-219ENST00000607841 IRX3P78415 501 aaPredicted RBP16.81■□□□□ 0.28
CTSA-219ENST00000607841 USP17L24Q0WX57 530 aa16.81■□□□□ 0.28
CTSA-219ENST00000607841 DGKZQ13574 1117 aa16.81■□□□□ 0.28
CTSA-219ENST00000607841 NOM1Q5C9Z4 860 aaKnown RBP16.81■□□□□ 0.28
CTSA-219ENST00000607841 NCOA7Q8NI08 942 aa16.81■□□□□ 0.28
CTSA-219ENST00000607841 SMCR8Q8TEV9 937 aaPredicted RBP16.81■□□□□ 0.28
CTSA-219ENST00000607841 TTC14Q96N46 770 aa16.81■□□□□ 0.28
CTSA-219ENST00000607841 IL17RBQ9NRM6 502 aa16.81■□□□□ 0.28
CTSA-219ENST00000607841 ATAD5Q96QE3 1844 aa16.81■□□□□ 0.28
CTSA-219ENST00000607841 RAD21O60216 631 aa16.8■□□□□ 0.28
CTSA-219ENST00000607841 TLR2O60603 784 aa16.8■□□□□ 0.28
CTSA-219ENST00000607841 HSPA8P11142 646 aaKnown RBP16.8■□□□□ 0.28
CTSA-219ENST00000607841 NOVP48745 357 aa16.8■□□□□ 0.28
CTSA-219ENST00000607841 UBAC1Q9BSL1 405 aa16.8■□□□□ 0.28
CTSA-219ENST00000607841 ZSWIM5Q9P217 1185 aa16.8■□□□□ 0.28
CTSA-219ENST00000607841 TSKSQ9UJT2 592 aa16.8■□□□□ 0.28
CTSA-219ENST00000607841 F5H6K3 240 aa16.79■□□□□ 0.28
CTSA-219ENST00000607841 GPR25O00155 361 aa16.79■□□□□ 0.28
CTSA-219ENST00000607841 WDR46O15213 610 aaKnown RBP16.79■□□□□ 0.28
CTSA-219ENST00000607841 NMT2O60551 498 aa16.79■□□□□ 0.28
CTSA-219ENST00000607841 CYP2C8P10632 490 aa16.79■□□□□ 0.28
CTSA-219ENST00000607841 KLRC3Q07444 240 aa16.79■□□□□ 0.28
CTSA-219ENST00000607841 DGKHQ86XP1 1220 aa16.79■□□□□ 0.28
CTSA-219ENST00000607841 GMCL1P1Q8NEA9 526 aa16.79■□□□□ 0.28
CTSA-219ENST00000607841 ASCC2Q9H1I8 757 aaPredicted RBP16.79■□□□□ 0.28
CTSA-219ENST00000607841 RPAP3Q9H6T3 665 aaPredicted RBP16.79■□□□□ 0.28
CTSA-219ENST00000607841 PHIPQ8WWQ0 1821 aa16.79■□□□□ 0.28
CTSA-219ENST00000607841 TOP1P11387 765 aaKnown RBP16.78■□□□□ 0.28
CTSA-219ENST00000607841 GCLCP48506 637 aaPredicted RBP16.78■□□□□ 0.28
CTSA-219ENST00000607841 LBX1P52954 281 aa16.78■□□□□ 0.28
CTSA-219ENST00000607841 KRT32Q14532 448 aa16.78■□□□□ 0.28
CTSA-219ENST00000607841 SART3Q15020 963 aaKnown RBP16.78■□□□□ 0.28
CTSA-219ENST00000607841 CATSPERGQ6ZRH7 1159 aa16.78■□□□□ 0.28
CTSA-219ENST00000607841 SPICE1Q8N0Z3 855 aa16.78■□□□□ 0.28
CTSA-219ENST00000607841 LRRC47Q8N1G4 583 aaKnown RBP16.78■□□□□ 0.28
CTSA-219ENST00000607841 GTF3C2Q8WUA4 911 aaPredicted RBP16.78■□□□□ 0.28
CTSA-219ENST00000607841 ZSCAN10Q96SZ4 725 aaPredicted RBP16.78■□□□□ 0.28
CTSA-219ENST00000607841 ERICH2A1L162 156 aa16.77■□□□□ 0.28
CTSA-219ENST00000607841 NDUFB10O96000 172 aa16.77■□□□□ 0.28
CTSA-219ENST00000607841 MCCP23508 829 aa16.77■□□□□ 0.28
CTSA-219ENST00000607841 HSPA4P34932 840 aa16.77■□□□□ 0.28
CTSA-219ENST00000607841 TSGA10IPQ3SY00 556 aa16.77■□□□□ 0.28
CTSA-219ENST00000607841 SLFN13Q68D06 897 aa16.77■□□□□ 0.28
CTSA-219ENST00000607841 TMEM47Q9BQJ4 181 aa16.77■□□□□ 0.28
CTSA-219ENST00000607841 ZKSCAN3Q9BRR0 538 aa16.77■□□□□ 0.28
CTSA-219ENST00000607841 TANGO6Q9C0B7 1094 aa16.77■□□□□ 0.28
CTSA-219ENST00000607841 R3HDMLQ9H3Y0 253 aa16.77■□□□□ 0.28
CTSA-219ENST00000607841 PRDM10Q9NQV6 1147 aa16.77■□□□□ 0.28
CTSA-219ENST00000607841 HOXC10Q9NYD6 342 aa16.77■□□□□ 0.28
CTSA-219ENST00000607841 MYH8P13535 1937 aa16.76■□□□□ 0.27
CTSA-219ENST00000607841 FKTNO75072 461 aa16.76■□□□□ 0.27
CTSA-219ENST00000607841 SP3Q02447 781 aa16.76■□□□□ 0.27
CTSA-219ENST00000607841 COG2Q14746 738 aa16.76■□□□□ 0.27
CTSA-219ENST00000607841 KIAA1755Q5JYT7 1200 aa16.76■□□□□ 0.27
CTSA-219ENST00000607841 C17orf99Q6UX52 265 aa16.76■□□□□ 0.27
CTSA-219ENST00000607841 STOX1Q6ZVD7 989 aa16.76■□□□□ 0.27
CTSA-219ENST00000607841 ANKS1AQ92625 1134 aa16.76■□□□□ 0.27
CTSA-219ENST00000607841 P2RX7Q99572 595 aaKnown RBP16.76■□□□□ 0.27
CTSA-219ENST00000607841 TAF6LQ9Y6J9 622 aa16.76■□□□□ 0.27
CTSA-219ENST00000607841 LAMA4Q16363 1823 aa16.75■□□□□ 0.27
CTSA-219ENST00000607841 TNKSO95271 1327 aa16.75■□□□□ 0.27
CTSA-219ENST00000607841 MCM5P33992 734 aa16.75■□□□□ 0.27
CTSA-219ENST00000607841 SLC1A4P43007 532 aa16.75■□□□□ 0.27
CTSA-219ENST00000607841 HERVK_113P62684 666 aa16.75■□□□□ 0.27
CTSA-219ENST00000607841 NKX2-3Q8TAU0 364 aa16.75■□□□□ 0.27
CTSA-219ENST00000607841 ZNF296Q8WUU4 475 aaPredicted RBP16.75■□□□□ 0.27
CTSA-219ENST00000607841 KCNB2Q92953 911 aa16.75■□□□□ 0.27
CTSA-219ENST00000607841 GMCL1Q96IK5 515 aa16.75■□□□□ 0.27
CTSA-219ENST00000607841 NEK1Q96PY6 1258 aa16.75■□□□□ 0.27
CTSA-219ENST00000607841 MTA3Q9BTC8 594 aa16.75■□□□□ 0.27
CTSA-219ENST00000607841 USP26Q9BXU7 913 aa16.75■□□□□ 0.27
CTSA-219ENST00000607841 KAT14Q9H8E8 782 aa16.75■□□□□ 0.27
CTSA-219ENST00000607841 CPA4Q9UI42 421 aa16.75■□□□□ 0.27
CTSA-219ENST00000607841 GREB1LQ9C091 1923 aaPredicted RBP16.74■□□□□ 0.27
CTSA-219ENST00000607841 MYPNQ86TC9 1320 aa16.74■□□□□ 0.27
CTSA-219ENST00000607841 IFIT3O14879 490 aaKnown RBP16.74■□□□□ 0.27
CTSA-219ENST00000607841 FLOT1O75955 427 aa16.74■□□□□ 0.27
CTSA-219ENST00000607841 HMGB1P09429 215 aaKnown RBP16.74■□□□□ 0.27
CTSA-219ENST00000607841 BMP3P12645 472 aa16.74■□□□□ 0.27
CTSA-219ENST00000607841 KIF22Q14807 665 aa16.74■□□□□ 0.27
CTSA-219ENST00000607841 ARHGEF6Q15052 776 aa16.74■□□□□ 0.27
CTSA-219ENST00000607841 FAM83BQ5T0W9 1011 aa16.74■□□□□ 0.27
CTSA-219ENST00000607841 IFIT1BQ5T764 474 aaKnown RBP16.74■□□□□ 0.27
CTSA-219ENST00000607841 RCSD1Q6JBY9 416 aa16.74■□□□□ 0.27
CTSA-219ENST00000607841 CYB5R4Q7L1T6 521 aa16.74■□□□□ 0.27
CTSA-219ENST00000607841 MB21D2Q8IYB1 491 aaPredicted RBP16.74■□□□□ 0.27
CTSA-219ENST00000607841 ENAHQ8N8S7 591 aaPredicted RBP16.74■□□□□ 0.27
CTSA-219ENST00000607841 DCAF4Q8WV16 495 aa16.74■□□□□ 0.27
CTSA-219ENST00000607841 ERO1AQ96HE7 468 aa16.74■□□□□ 0.27
CTSA-219ENST00000607841 LOC285556D6RIA3 1793 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms