RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 SBK1Q52WX2 424 aa11.95□□□□□ -0.5
CTSA-215ENST00000607187 C16orf86Q6ZW13 317 aa11.95□□□□□ -0.5
CTSA-215ENST00000607187 TICAM2Q86XR7 235 aa11.95□□□□□ -0.5
CTSA-215ENST00000607187 PLEKHM2Q8IWE5 1019 aa11.95□□□□□ -0.5
CTSA-215ENST00000607187 MS4A3Q96HJ5 214 aa11.95□□□□□ -0.5
CTSA-215ENST00000607187 SEC62Q99442 399 aaKnown RBP11.95□□□□□ -0.5
CTSA-215ENST00000607187 ARHGAP39Q9C0H5 1083 aa11.95□□□□□ -0.5
CTSA-215ENST00000607187 OSBPL3Q9H4L5 887 aa11.95□□□□□ -0.5
CTSA-215ENST00000607187 TMOD4Q9NZQ9 345 aa11.95□□□□□ -0.5
CTSA-215ENST00000607187 ARPP21Q9UBL0 812 aaPredicted RBP11.95□□□□□ -0.5
CTSA-215ENST00000607187 PNMA3Q9UL41 463 aa11.95□□□□□ -0.5
CTSA-215ENST00000607187 GREB1LQ9C091 1923 aaPredicted RBP11.94□□□□□ -0.5
CTSA-215ENST00000607187 PATL2C9JE40 543 aaKnown RBP11.94□□□□□ -0.5
CTSA-215ENST00000607187 OSBPP22059 807 aa11.94□□□□□ -0.5
CTSA-215ENST00000607187 CTGFP29279 349 aa11.94□□□□□ -0.5
CTSA-215ENST00000607187 USP17L2Q6R6M4 530 aa11.94□□□□□ -0.5
CTSA-215ENST00000607187 TMC2Q8TDI7 906 aa11.94□□□□□ -0.5
CTSA-215ENST00000607187 SMCR8Q8TEV9 937 aaPredicted RBP11.94□□□□□ -0.5
CTSA-215ENST00000607187 KIAA1683Q9H0B3 1180 aa11.94□□□□□ -0.5
CTSA-215ENST00000607187 ASCC2Q9H1I8 757 aaPredicted RBP11.94□□□□□ -0.5
CTSA-215ENST00000607187 TNRC18O15417 2968 aaPredicted RBP11.93□□□□□ -0.5
CTSA-215ENST00000607187 MPHOSPH10O00566 681 aaKnown RBP11.93□□□□□ -0.5
CTSA-215ENST00000607187 AKR1B1P15121 316 aa11.93□□□□□ -0.5
CTSA-215ENST00000607187 PSMC4P43686 418 aa11.93□□□□□ -0.5
CTSA-215ENST00000607187 GCLCP48506 637 aaPredicted RBP11.93□□□□□ -0.5
CTSA-215ENST00000607187 USP14P54578 494 aa11.93□□□□□ -0.5
CTSA-215ENST00000607187 SEPT2Q15019 361 aa11.93□□□□□ -0.5
CTSA-215ENST00000607187 TMEM179Q6ZVK1 233 aa11.93□□□□□ -0.5
CTSA-215ENST00000607187 PIP4P2Q8N4L2 257 aa11.93□□□□□ -0.5
CTSA-215ENST00000607187 ACER1Q8TDN7 264 aa11.93□□□□□ -0.5
CTSA-215ENST00000607187 TRIM47Q96LD4 638 aa11.93□□□□□ -0.5
CTSA-215ENST00000607187 C12orf42Q96LP6 360 aa11.93□□□□□ -0.5
CTSA-215ENST00000607187 CCDC17Q96LX7 622 aa11.93□□□□□ -0.5
CTSA-215ENST00000607187 EPB41L4AQ9HCS5 686 aaPredicted RBP11.93□□□□□ -0.5
CTSA-215ENST00000607187 ROBO3Q96MS0 1386 aa11.92□□□□□ -0.5
CTSA-215ENST00000607187 RLFQ13129 1914 aa11.92□□□□□ -0.5
CTSA-215ENST00000607187 MYH4Q9Y623 1939 aa11.92□□□□□ -0.5
CTSA-215ENST00000607187 MINDY4BA8MYZ0 360 aa11.92□□□□□ -0.5
CTSA-215ENST00000607187 APPP05067 770 aa11.92□□□□□ -0.5
CTSA-215ENST00000607187 TDO2P48775 406 aa11.92□□□□□ -0.5
CTSA-215ENST00000607187 FAM110CQ1W6H9 321 aa11.92□□□□□ -0.5
CTSA-215ENST00000607187 IFNL3Q8IZI9 196 aa11.92□□□□□ -0.5
CTSA-215ENST00000607187 ANKRD13CQ8N6S4 541 aa11.92□□□□□ -0.5
CTSA-215ENST00000607187 FEZ1Q99689 392 aa11.92□□□□□ -0.5
CTSA-215ENST00000607187 HELLSQ9NRZ9 838 aa11.92□□□□□ -0.5
CTSA-215ENST00000607187 PARP14Q460N5 1801 aa11.91□□□□□ -0.5
CTSA-215ENST00000607187 A0A1W2PRG0 241 aa11.91□□□□□ -0.5
CTSA-215ENST00000607187 TRIM6-TRIM34B2RNG4 842 aa11.91□□□□□ -0.5
CTSA-215ENST00000607187 FOXP2O15409 715 aa11.91□□□□□ -0.5
CTSA-215ENST00000607187 FMNL1O95466 1100 aaPredicted RBP11.91□□□□□ -0.5
CTSA-215ENST00000607187 HOXD10P28358 340 aa11.91□□□□□ -0.5
CTSA-215ENST00000607187 RGS19P49795 217 aa11.91□□□□□ -0.5
CTSA-215ENST00000607187 PRMT2P55345 433 aa11.91□□□□□ -0.5
CTSA-215ENST00000607187 FCGRTP55899 365 aa11.91□□□□□ -0.5
CTSA-215ENST00000607187 IRX3P78415 501 aaPredicted RBP11.91□□□□□ -0.5
CTSA-215ENST00000607187 CCDC129Q6ZRS4 1044 aa11.91□□□□□ -0.5
CTSA-215ENST00000607187 SIAH1Q8IUQ4 282 aa11.91□□□□□ -0.5
CTSA-215ENST00000607187 ARMC5Q96C12 935 aa11.91□□□□□ -0.5
CTSA-215ENST00000607187 P2RX7Q99572 595 aaKnown RBP11.91□□□□□ -0.5
CTSA-215ENST00000607187 NACAP1Q9BZK3 213 aa11.91□□□□□ -0.5
CTSA-215ENST00000607187 PTCH2Q9Y6C5 1203 aa11.91□□□□□ -0.5
CTSA-215ENST00000607187 RBBP6Q7Z6E9 1792 aaKnown RBP11.91□□□□□ -0.5
CTSA-215ENST00000607187 A0A0D9SFI3 127 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 USP17L15C9J2P7 530 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 USP17L13C9JLJ4 530 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 USP17L11C9JVI0 530 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 USP17L18D6R9N7 530 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 USP17L22D6RA61 530 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 USP17L17D6RBQ6 530 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 USP17L19D6RCP7 530 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 USP17L20D6RJB6 530 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 VCAM1P19320 739 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 RASA1P20936 1047 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 HERVK_113P62684 666 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 ICA1Q05084 483 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 USP17L24Q0WX57 530 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 ZYXQ15942 572 aaKnown RBP11.9□□□□□ -0.5
CTSA-215ENST00000607187 MCMDC2Q4G0Z9 681 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 RILPL2Q969X0 211 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 FAM227BQ96M60 508 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 GOPCQ9HD26 462 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 MORF4L1Q9UBU8 362 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 SRRDQ9UH36 339 aa11.9□□□□□ -0.5
CTSA-215ENST00000607187 PLXNB2O15031 1838 aa11.89□□□□□ -0.51
CTSA-215ENST00000607187 PPARAQ07869 468 aa11.89□□□□□ -0.51
CTSA-215ENST00000607187 SLC9C1Q4G0N8 1177 aa11.89□□□□□ -0.51
CTSA-215ENST00000607187 VPS53Q5VIR6 699 aa11.89□□□□□ -0.51
CTSA-215ENST00000607187 POTEEQ6S8J3 1075 aa11.89□□□□□ -0.51
CTSA-215ENST00000607187 CATSPERGQ6ZRH7 1159 aa11.89□□□□□ -0.51
CTSA-215ENST00000607187 CLEC10AQ8IUN9 316 aa11.89□□□□□ -0.51
CTSA-215ENST00000607187 PLPP6Q8IY26 295 aa11.89□□□□□ -0.51
CTSA-215ENST00000607187 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.89□□□□□ -0.51
CTSA-215ENST00000607187 NAPBQ9H115 298 aa11.89□□□□□ -0.51
CTSA-215ENST00000607187 KANSL2Q9H9L4 492 aa11.89□□□□□ -0.51
CTSA-215ENST00000607187 MKNK2Q9HBH9 465 aa11.89□□□□□ -0.51
CTSA-215ENST00000607187 ZNF287Q9HBT7 754 aa11.89□□□□□ -0.51
CTSA-215ENST00000607187 ARHGEF10LQ9HCE6 1279 aa11.89□□□□□ -0.51
CTSA-215ENST00000607187 TMX2Q9Y320 296 aa11.89□□□□□ -0.51
CTSA-215ENST00000607187 PDE4DIPQ5VU43 2346 aa11.89□□□□□ -0.51
CTSA-215ENST00000607187 MYPNQ86TC9 1320 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms