RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 GABPAQ06546 454 aa18.26■□□□□ 0.51
SSBP4-214ENST00000607020 LRRC41Q15345 812 aa18.26■□□□□ 0.51
SSBP4-214ENST00000607020 SH3RF1Q7Z6J0 888 aa18.26■□□□□ 0.51
SSBP4-214ENST00000607020 MB21D1Q8N884 522 aa18.26■□□□□ 0.51
SSBP4-214ENST00000607020 MIGA1Q8NAN2 632 aa18.26■□□□□ 0.51
SSBP4-214ENST00000607020 MROH8Q9H579 483 aa18.26■□□□□ 0.51
SSBP4-214ENST00000607020 NOP58Q9Y2X3 529 aaKnown RBP18.26■□□□□ 0.51
SSBP4-214ENST00000607020 TACC3Q9Y6A5 838 aa18.26■□□□□ 0.51
SSBP4-214ENST00000607020 ERCC3P19447 782 aa18.25■□□□□ 0.51
SSBP4-214ENST00000607020 PLCD1P51178 756 aa18.25■□□□□ 0.51
SSBP4-214ENST00000607020 MIER1Q8N108 512 aa18.25■□□□□ 0.51
SSBP4-214ENST00000607020 PRDM5Q9NQX1 630 aaPredicted RBP18.25■□□□□ 0.51
SSBP4-214ENST00000607020 DBNLQ9UJU6 430 aaKnown RBP18.25■□□□□ 0.51
SSBP4-214ENST00000607020 PHF24Q9UPV7 400 aa18.25■□□□□ 0.51
SSBP4-214ENST00000607020 A0A1W2PRG0 241 aa18.24■□□□□ 0.51
SSBP4-214ENST00000607020 IDH1O75874 414 aaKnown RBP18.24■□□□□ 0.51
SSBP4-214ENST00000607020 FOSL2P15408 326 aa18.24■□□□□ 0.51
SSBP4-214ENST00000607020 TLE2Q04725 743 aa18.24■□□□□ 0.51
SSBP4-214ENST00000607020 SEPT2Q15019 361 aa18.24■□□□□ 0.51
SSBP4-214ENST00000607020 MAGEB6Q8N7X4 407 aa18.24■□□□□ 0.51
SSBP4-214ENST00000607020 SPTBN5Q9NRC6 3674 aaKnown RBP18.24■□□□□ 0.51
SSBP4-214ENST00000607020 KIAA0355O15063 1070 aa18.23■□□□□ 0.51
SSBP4-214ENST00000607020 SURF6O75683 361 aaKnown RBP18.23■□□□□ 0.51
SSBP4-214ENST00000607020 MAP3K12Q12852 859 aa18.23■□□□□ 0.51
SSBP4-214ENST00000607020 ANO1Q5XXA6 986 aa18.23■□□□□ 0.51
SSBP4-214ENST00000607020 RIOK1Q9BRS2 568 aaKnown RBP18.23■□□□□ 0.51
SSBP4-214ENST00000607020 MAST2Q6P0Q8 1798 aa18.22■□□□□ 0.51
SSBP4-214ENST00000607020 ITGB8P26012 769 aa18.22■□□□□ 0.51
SSBP4-214ENST00000607020 DSG3P32926 999 aa18.22■□□□□ 0.51
SSBP4-214ENST00000607020 OS9Q13438 667 aaPredicted RBP18.22■□□□□ 0.51
SSBP4-214ENST00000607020 PRAMEF19Q5SWL8 479 aa18.22■□□□□ 0.51
SSBP4-214ENST00000607020 MAML3Q96JK9 1138 aa18.22■□□□□ 0.51
SSBP4-214ENST00000607020 PRUNE2Q8WUY3 3088 aa18.22■□□□□ 0.51
SSBP4-214ENST00000607020 EYSQ5T1H1 3165 aa18.22■□□□□ 0.51
SSBP4-214ENST00000607020 CLTBP09497 229 aa18.21■□□□□ 0.51
SSBP4-214ENST00000607020 FAM47AQ5JRC9 791 aa18.21■□□□□ 0.51
SSBP4-214ENST00000607020 FERMT2Q96AC1 680 aa18.21■□□□□ 0.51
SSBP4-214ENST00000607020 EAF2Q96CJ1 260 aaPredicted RBP18.21■□□□□ 0.51
SSBP4-214ENST00000607020 TLR7Q9NYK1 1049 aaKnown RBP18.21■□□□□ 0.51
SSBP4-214ENST00000607020 TNNQ9UQP3 1299 aa18.21■□□□□ 0.51
SSBP4-214ENST00000607020 SLC25A27O95847 323 aa18.2■□□□□ 0.5
SSBP4-214ENST00000607020 POLR3DP05423 398 aaPredicted RBP18.2■□□□□ 0.5
SSBP4-214ENST00000607020 EPHB4P54760 987 aa18.2■□□□□ 0.5
SSBP4-214ENST00000607020 RNPC3Q96LT9 517 aaKnown RBP18.2■□□□□ 0.5
SSBP4-214ENST00000607020 TOX2Q96NM4 488 aa18.2■□□□□ 0.5
SSBP4-214ENST00000607020 TANGO6Q9C0B7 1094 aa18.2■□□□□ 0.5
SSBP4-214ENST00000607020 CCDC8Q9H0W5 538 aaPredicted RBP18.2■□□□□ 0.5
SSBP4-214ENST00000607020 ANTXR1Q9H6X2 564 aa18.2■□□□□ 0.5
SSBP4-214ENST00000607020 DIS3Q9Y2L1 958 aaKnown RBP18.2■□□□□ 0.5
SSBP4-214ENST00000607020 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.19■□□□□ 0.5
SSBP4-214ENST00000607020 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.19■□□□□ 0.5
SSBP4-214ENST00000607020 RARBP10826 455 aa18.19■□□□□ 0.5
SSBP4-214ENST00000607020 FCER1AP12319 257 aa18.19■□□□□ 0.5
SSBP4-214ENST00000607020 TJAP1Q5JTD0 557 aa18.19■□□□□ 0.5
SSBP4-214ENST00000607020 KIAA1755Q5JYT7 1200 aa18.19■□□□□ 0.5
SSBP4-214ENST00000607020 TMEM179Q6ZVK1 233 aa18.19■□□□□ 0.5
SSBP4-214ENST00000607020 ANKRD33Q7Z3H0 272 aa18.19■□□□□ 0.5
SSBP4-214ENST00000607020 RNF180Q86T96 592 aa18.19■□□□□ 0.5
SSBP4-214ENST00000607020 NCAPG2Q86XI2 1143 aa18.19■□□□□ 0.5
SSBP4-214ENST00000607020 SIAH1Q8IUQ4 282 aa18.19■□□□□ 0.5
SSBP4-214ENST00000607020 XPNPEP3Q9NQH7 507 aa18.19■□□□□ 0.5
SSBP4-214ENST00000607020 ADAMTS5Q9UNA0 930 aa18.19■□□□□ 0.5
SSBP4-214ENST00000607020 BCAR3O75815 825 aa18.18■□□□□ 0.5
SSBP4-214ENST00000607020 MYCNP04198 464 aaPredicted RBP18.18■□□□□ 0.5
SSBP4-214ENST00000607020 RAG1P15918 1043 aa18.18■□□□□ 0.5
SSBP4-214ENST00000607020 GRIN2CQ14957 1233 aa18.18■□□□□ 0.5
SSBP4-214ENST00000607020 CLUAP1Q96AJ1 413 aa18.18■□□□□ 0.5
SSBP4-214ENST00000607020 TSEN34Q9BSV6 310 aaKnown RBP18.18■□□□□ 0.5
SSBP4-214ENST00000607020 TMX2Q9Y320 296 aa18.18■□□□□ 0.5
SSBP4-214ENST00000607020 ROBO3Q96MS0 1386 aa18.17■□□□□ 0.5
SSBP4-214ENST00000607020 LTBP2Q14767 1821 aa18.17■□□□□ 0.5
SSBP4-214ENST00000607020 ZNF236Q9UL36 1845 aa18.17■□□□□ 0.5
SSBP4-214ENST00000607020 MAGEB6P1A0A0J9YX57 407 aa18.17■□□□□ 0.5
SSBP4-214ENST00000607020 FPGSQ05932 587 aa18.17■□□□□ 0.5
SSBP4-214ENST00000607020 TMEM57Q8N5G2 664 aa18.17■□□□□ 0.5
SSBP4-214ENST00000607020 FRAT1Q92837 279 aaPredicted RBP18.17■□□□□ 0.5
SSBP4-214ENST00000607020 ATG4CQ96DT6 458 aa18.17■□□□□ 0.5
SSBP4-214ENST00000607020 TINF2Q9BSI4 451 aa18.17■□□□□ 0.5
SSBP4-214ENST00000607020 CRNKL1Q9BZJ0 848 aaKnown RBP18.17■□□□□ 0.5
SSBP4-214ENST00000607020 RLFQ13129 1914 aa18.16■□□□□ 0.5
SSBP4-214ENST00000607020 A0A1W2PQ45 241 aaPredicted RBP18.16■□□□□ 0.5
SSBP4-214ENST00000607020 A0A1W2PQY0 241 aa18.16■□□□□ 0.5
SSBP4-214ENST00000607020 MPHOSPH10O00566 681 aaKnown RBP18.16■□□□□ 0.5
SSBP4-214ENST00000607020 FLOT1O75955 427 aa18.16■□□□□ 0.5
SSBP4-214ENST00000607020 DNAJB2P25686 324 aa18.16■□□□□ 0.5
SSBP4-214ENST00000607020 PLS1Q14651 629 aa18.16■□□□□ 0.5
SSBP4-214ENST00000607020 TMEM132BQ14DG7 1078 aa18.16■□□□□ 0.5
SSBP4-214ENST00000607020 TTF1Q15361 905 aaPredicted RBP18.16■□□□□ 0.5
SSBP4-214ENST00000607020 ZNF792Q3KQV3 632 aa18.16■□□□□ 0.5
SSBP4-214ENST00000607020 SH2D4AQ9H788 454 aa18.16■□□□□ 0.5
SSBP4-214ENST00000607020 VCPKMTQ9H867 229 aa18.16■□□□□ 0.5
SSBP4-214ENST00000607020 TMEM39AQ9NV64 488 aa18.16■□□□□ 0.5
SSBP4-214ENST00000607020 MCM9Q9NXL9 1143 aa18.16■□□□□ 0.5
SSBP4-214ENST00000607020 SWAP70Q9UH65 585 aa18.16■□□□□ 0.5
SSBP4-214ENST00000607020 FOCADQ5VW36 1801 aa18.16■□□□□ 0.5
SSBP4-214ENST00000607020 CDH23Q9H251 3354 aa18.15■□□□□ 0.5
SSBP4-214ENST00000607020 FRMPD3Q5JV73 1810 aa18.15■□□□□ 0.5
SSBP4-214ENST00000607020 TNFRSF10AO00220 468 aa18.15■□□□□ 0.5
SSBP4-214ENST00000607020 WDR46O15213 610 aaKnown RBP18.15■□□□□ 0.5
SSBP4-214ENST00000607020 PGK1P00558 417 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms