RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 FCGRTP55899 365 aa15.22■□□□□ 0.03
SHROOM1-207ENST00000606676 ATP2B2Q01814 1243 aa15.22■□□□□ 0.03
SHROOM1-207ENST00000606676 SKAP1Q86WV1 359 aa15.22■□□□□ 0.03
SHROOM1-207ENST00000606676 NEDD1Q8NHV4 660 aa15.22■□□□□ 0.03
SHROOM1-207ENST00000606676 LPAR1Q92633 364 aa15.22■□□□□ 0.03
SHROOM1-207ENST00000606676 SH2D4AQ9H788 454 aa15.22■□□□□ 0.03
SHROOM1-207ENST00000606676 NYAP2Q9P242 653 aa15.22■□□□□ 0.03
SHROOM1-207ENST00000606676 CNMDO75829 334 aa15.21■□□□□ 0.03
SHROOM1-207ENST00000606676 PRMT2P55345 433 aa15.21■□□□□ 0.03
SHROOM1-207ENST00000606676 TFAP4Q01664 338 aa15.21■□□□□ 0.03
SHROOM1-207ENST00000606676 Q3C1V9 767 aa15.21■□□□□ 0.03
SHROOM1-207ENST00000606676 FAM47AQ5JRC9 791 aa15.21■□□□□ 0.03
SHROOM1-207ENST00000606676 LBX2Q6XYB7 198 aa15.21■□□□□ 0.03
SHROOM1-207ENST00000606676 SPICE1Q8N0Z3 855 aa15.21■□□□□ 0.03
SHROOM1-207ENST00000606676 CEP95Q96GE4 821 aa15.21■□□□□ 0.03
SHROOM1-207ENST00000606676 NBPF3Q9H094 633 aa15.21■□□□□ 0.03
SHROOM1-207ENST00000606676 MTMR4Q9NYA4 1195 aa15.21■□□□□ 0.03
SHROOM1-207ENST00000606676 MYH8P13535 1937 aa15.21■□□□□ 0.02
SHROOM1-207ENST00000606676 PLIN4Q96Q06 1357 aa15.21■□□□□ 0.02
SHROOM1-207ENST00000606676 SPDYE16A6NNV3 312 aaPredicted RBP15.2■□□□□ 0.02
SHROOM1-207ENST00000606676 TSPY3P0CV98 308 aa15.2■□□□□ 0.02
SHROOM1-207ENST00000606676 TSPY8P0CW00 308 aa15.2■□□□□ 0.02
SHROOM1-207ENST00000606676 CHMLP26374 656 aa15.2■□□□□ 0.02
SHROOM1-207ENST00000606676 HOXD10P28358 340 aa15.2■□□□□ 0.02
SHROOM1-207ENST00000606676 PRKCZQ05513 592 aa15.2■□□□□ 0.02
SHROOM1-207ENST00000606676 GPRC5AQ8NFJ5 357 aa15.2■□□□□ 0.02
SHROOM1-207ENST00000606676 GTF3C2Q8WUA4 911 aaPredicted RBP15.2■□□□□ 0.02
SHROOM1-207ENST00000606676 MKL1Q969V6 931 aa15.2■□□□□ 0.02
SHROOM1-207ENST00000606676 ARMC5Q96C12 935 aa15.2■□□□□ 0.02
SHROOM1-207ENST00000606676 GABRQQ9UN88 632 aa15.2■□□□□ 0.02
SHROOM1-207ENST00000606676 RABGAP1Q9Y3P9 1069 aa15.2■□□□□ 0.02
SHROOM1-207ENST00000606676 MYPNQ86TC9 1320 aa15.19■□□□□ 0.02
SHROOM1-207ENST00000606676 TNPO2O14787 897 aaKnown RBP15.19■□□□□ 0.02
SHROOM1-207ENST00000606676 WDR46O15213 610 aaKnown RBP15.19■□□□□ 0.02
SHROOM1-207ENST00000606676 ORC4O43929 436 aa15.19■□□□□ 0.02
SHROOM1-207ENST00000606676 HAND2P61296 217 aa15.19■□□□□ 0.02
SHROOM1-207ENST00000606676 ERVK-9P63128 1117 aa15.19■□□□□ 0.02
SHROOM1-207ENST00000606676 ERVK-24P63145 666 aa15.19■□□□□ 0.02
SHROOM1-207ENST00000606676 COG2Q14746 738 aa15.19■□□□□ 0.02
SHROOM1-207ENST00000606676 PAGR1Q9BTK6 254 aa15.19■□□□□ 0.02
SHROOM1-207ENST00000606676 DSCC1Q9BVC3 393 aa15.19■□□□□ 0.02
SHROOM1-207ENST00000606676 IL17RBQ9NRM6 502 aa15.19■□□□□ 0.02
SHROOM1-207ENST00000606676 BTBD7Q9P203 1132 aa15.19■□□□□ 0.02
SHROOM1-207ENST00000606676 CLIP2Q9UDT6 1046 aa15.19■□□□□ 0.02
SHROOM1-207ENST00000606676 MKI67P46013 3256 aaKnown RBP15.18■□□□□ 0.02
SHROOM1-207ENST00000606676 TBC1D10CQ8IV04 446 aa15.18■□□□□ 0.02
SHROOM1-207ENST00000606676 NKX2-3Q8TAU0 364 aa15.18■□□□□ 0.02
SHROOM1-207ENST00000606676 CCDC136Q96JN2 1154 aa15.18■□□□□ 0.02
SHROOM1-207ENST00000606676 TANGO6Q9C0B7 1094 aa15.18■□□□□ 0.02
SHROOM1-207ENST00000606676 PORCNQ9H237 461 aa15.18■□□□□ 0.02
SHROOM1-207ENST00000606676 GOPCQ9HD26 462 aa15.18■□□□□ 0.02
SHROOM1-207ENST00000606676 HOXC10Q9NYD6 342 aa15.18■□□□□ 0.02
SHROOM1-207ENST00000606676 GJD2Q9UKL4 321 aa15.18■□□□□ 0.02
SHROOM1-207ENST00000606676 F5H6K3 240 aa15.17■□□□□ 0.02
SHROOM1-207ENST00000606676 RANBP6O60518 1105 aaKnown RBP15.17■□□□□ 0.02
SHROOM1-207ENST00000606676 NMT2O60551 498 aa15.17■□□□□ 0.02
SHROOM1-207ENST00000606676 TTLL1O95922 423 aa15.17■□□□□ 0.02
SHROOM1-207ENST00000606676 DSG3P32926 999 aa15.17■□□□□ 0.02
SHROOM1-207ENST00000606676 NOVP48745 357 aa15.17■□□□□ 0.02
SHROOM1-207ENST00000606676 FLT3LGP49771 235 aa15.17■□□□□ 0.02
SHROOM1-207ENST00000606676 KLRC3Q07444 240 aa15.17■□□□□ 0.02
SHROOM1-207ENST00000606676 SLC9C1Q4G0N8 1177 aa15.17■□□□□ 0.02
SHROOM1-207ENST00000606676 AKNAD1Q5T1N1 836 aa15.17■□□□□ 0.02
SHROOM1-207ENST00000606676 SH3TC2Q8TF17 1288 aa15.17■□□□□ 0.02
SHROOM1-207ENST00000606676 COA7Q96BR5 231 aa15.17■□□□□ 0.02
SHROOM1-207ENST00000606676 ZNF333Q96JL9 665 aa15.17■□□□□ 0.02
SHROOM1-207ENST00000606676 FBXO28Q9NVF7 368 aa15.17■□□□□ 0.02
SHROOM1-207ENST00000606676 RAD50Q92878 1312 aa15.17■□□□□ 0.02
SHROOM1-207ENST00000606676 TSPY2A6NKD2 308 aa15.16■□□□□ 0.02
SHROOM1-207ENST00000606676 FLOT1O75955 427 aa15.16■□□□□ 0.02
SHROOM1-207ENST00000606676 NDUFB10O96000 172 aa15.16■□□□□ 0.02
SHROOM1-207ENST00000606676 SOX10P56693 466 aa15.16■□□□□ 0.02
SHROOM1-207ENST00000606676 FAM83BQ5T0W9 1011 aa15.16■□□□□ 0.02
SHROOM1-207ENST00000606676 LRRC47Q8N1G4 583 aaKnown RBP15.16■□□□□ 0.02
SHROOM1-207ENST00000606676 RAET1EQ8TD07 263 aa15.16■□□□□ 0.02
SHROOM1-207ENST00000606676 STAG1Q8WVM7 1258 aa15.16■□□□□ 0.02
SHROOM1-207ENST00000606676 NUP88Q99567 741 aaPredicted RBP15.16■□□□□ 0.02
SHROOM1-207ENST00000606676 SYNPO2Q9UMS6 1093 aa15.16■□□□□ 0.02
SHROOM1-207ENST00000606676 ADAMTS5Q9UNA0 930 aa15.16■□□□□ 0.02
SHROOM1-207ENST00000606676 RLFQ13129 1914 aa15.15■□□□□ 0.02
SHROOM1-207ENST00000606676 MGAMO43451 1857 aa15.15■□□□□ 0.02
SHROOM1-207ENST00000606676 ZNF213O14771 459 aa15.15■□□□□ 0.02
SHROOM1-207ENST00000606676 SGSM2O43147 1006 aa15.15■□□□□ 0.02
SHROOM1-207ENST00000606676 RAD21O60216 631 aa15.15■□□□□ 0.02
SHROOM1-207ENST00000606676 NEFLP07196 543 aa15.15■□□□□ 0.02
SHROOM1-207ENST00000606676 MAPK4P31152 587 aa15.15■□□□□ 0.02
SHROOM1-207ENST00000606676 RGS19P49795 217 aa15.15■□□□□ 0.02
SHROOM1-207ENST00000606676 IRF5Q13568 498 aa15.15■□□□□ 0.02
SHROOM1-207ENST00000606676 RRP12Q5JTH9 1297 aaKnown RBP15.15■□□□□ 0.02
SHROOM1-207ENST00000606676 MFSD6Q6ZSS7 791 aa15.15■□□□□ 0.02
SHROOM1-207ENST00000606676 NBPF11Q86T75 865 aa15.15■□□□□ 0.02
SHROOM1-207ENST00000606676 GMCL1P1Q8NEA9 526 aa15.15■□□□□ 0.02
SHROOM1-207ENST00000606676 ATG4CQ96DT6 458 aa15.15■□□□□ 0.02
SHROOM1-207ENST00000606676 NEDD4P46934 1319 aa15.15■□□□□ 0.02
SHROOM1-207ENST00000606676 PCP11498 1178 aaKnown RBP15.14■□□□□ 0.01
SHROOM1-207ENST00000606676 GRK4P32298 578 aa15.14■□□□□ 0.01
SHROOM1-207ENST00000606676 PTH1RQ03431 593 aa15.14■□□□□ 0.01
SHROOM1-207ENST00000606676 BMP2KLQ5H9B9 411 aa15.14■□□□□ 0.01
SHROOM1-207ENST00000606676 GPR142Q7Z601 462 aa15.14■□□□□ 0.01
SHROOM1-207ENST00000606676 RUFY2Q8WXA3 655 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms