RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 NEDD4P46934 1319 aa16.84■□□□□ 0.29
TUBE1-211ENST00000605457 ERO1AQ96HE7 468 aa16.83■□□□□ 0.28
TUBE1-211ENST00000605457 RNF41Q9H4P4 317 aaPredicted RBP16.83■□□□□ 0.28
TUBE1-211ENST00000605457 TOMM22Q9NS69 142 aa16.83■□□□□ 0.28
TUBE1-211ENST00000605457 USP17L15C9J2P7 530 aa16.82■□□□□ 0.28
TUBE1-211ENST00000605457 USP17L13C9JLJ4 530 aa16.82■□□□□ 0.28
TUBE1-211ENST00000605457 USP17L11C9JVI0 530 aa16.82■□□□□ 0.28
TUBE1-211ENST00000605457 USP17L18D6R9N7 530 aa16.82■□□□□ 0.28
TUBE1-211ENST00000605457 USP17L22D6RA61 530 aa16.82■□□□□ 0.28
TUBE1-211ENST00000605457 USP17L17D6RBQ6 530 aa16.82■□□□□ 0.28
TUBE1-211ENST00000605457 USP17L19D6RCP7 530 aa16.82■□□□□ 0.28
TUBE1-211ENST00000605457 USP17L20D6RJB6 530 aa16.82■□□□□ 0.28
TUBE1-211ENST00000605457 TTLL1O95922 423 aa16.82■□□□□ 0.28
TUBE1-211ENST00000605457 CAP1Q01518 475 aa16.82■□□□□ 0.28
TUBE1-211ENST00000605457 USP17L24Q0WX57 530 aa16.82■□□□□ 0.28
TUBE1-211ENST00000605457 RRP12Q5JTH9 1297 aaKnown RBP16.82■□□□□ 0.28
TUBE1-211ENST00000605457 CD99L2Q8TCZ2 262 aa16.82■□□□□ 0.28
TUBE1-211ENST00000605457 MAP4K1Q92918 833 aa16.82■□□□□ 0.28
TUBE1-211ENST00000605457 RPAP3Q9H6T3 665 aaPredicted RBP16.82■□□□□ 0.28
TUBE1-211ENST00000605457 IL17RBQ9NRM6 502 aa16.82■□□□□ 0.28
TUBE1-211ENST00000605457 NMT2O60551 498 aa16.81■□□□□ 0.28
TUBE1-211ENST00000605457 GCLCP48506 637 aaPredicted RBP16.81■□□□□ 0.28
TUBE1-211ENST00000605457 HERVK_113P62684 666 aa16.81■□□□□ 0.28
TUBE1-211ENST00000605457 LACTBP83111 547 aaPredicted RBP16.81■□□□□ 0.28
TUBE1-211ENST00000605457 CATSPERGQ6ZRH7 1159 aa16.81■□□□□ 0.28
TUBE1-211ENST00000605457 CTU1Q7Z7A3 348 aaKnown RBP16.81■□□□□ 0.28
TUBE1-211ENST00000605457 SPICE1Q8N0Z3 855 aa16.81■□□□□ 0.28
TUBE1-211ENST00000605457 NKX2-3Q8TAU0 364 aa16.81■□□□□ 0.28
TUBE1-211ENST00000605457 MKL1Q969V6 931 aa16.81■□□□□ 0.28
TUBE1-211ENST00000605457 P2RX7Q99572 595 aaKnown RBP16.81■□□□□ 0.28
TUBE1-211ENST00000605457 LSG1Q9H089 658 aaKnown RBP16.81■□□□□ 0.28
TUBE1-211ENST00000605457 GOPCQ9HD26 462 aa16.81■□□□□ 0.28
TUBE1-211ENST00000605457 CLIP2Q9UDT6 1046 aa16.81■□□□□ 0.28
TUBE1-211ENST00000605457 SYNPO2Q9UMS6 1093 aa16.81■□□□□ 0.28
TUBE1-211ENST00000605457 U3KPZ7 1027 aaPredicted RBP16.81■□□□□ 0.28
TUBE1-211ENST00000605457 WDR46O15213 610 aaKnown RBP16.81■□□□□ 0.28
TUBE1-211ENST00000605457 FAM110CQ1W6H9 321 aa16.81■□□□□ 0.28
TUBE1-211ENST00000605457 CASC1Q6TDU7 716 aa16.81■□□□□ 0.28
TUBE1-211ENST00000605457 CYP21A2P08686 494 aa16.8■□□□□ 0.28
TUBE1-211ENST00000605457 NOVP48745 357 aa16.8■□□□□ 0.28
TUBE1-211ENST00000605457 NT5C2P49902 561 aa16.8■□□□□ 0.28
TUBE1-211ENST00000605457 PPP4R3BQ5MIZ7 849 aa16.8■□□□□ 0.28
TUBE1-211ENST00000605457 KIAA1211Q6ZU35 1233 aa16.8■□□□□ 0.28
TUBE1-211ENST00000605457 ANKRD13CQ8N6S4 541 aa16.8■□□□□ 0.28
TUBE1-211ENST00000605457 ESR2Q92731 530 aa16.8■□□□□ 0.28
TUBE1-211ENST00000605457 RBM8AQ9Y5S9 174 aaKnown RBP16.8■□□□□ 0.28
TUBE1-211ENST00000605457 BRCA2P51587 3418 aa16.8■□□□□ 0.28
TUBE1-211ENST00000605457 POTEEQ6S8J3 1075 aa16.79■□□□□ 0.28
TUBE1-211ENST00000605457 OTOP1Q7RTM1 612 aa16.79■□□□□ 0.28
TUBE1-211ENST00000605457 LRRC47Q8N1G4 583 aaKnown RBP16.79■□□□□ 0.28
TUBE1-211ENST00000605457 TANGO6Q9C0B7 1094 aa16.79■□□□□ 0.28
TUBE1-211ENST00000605457 ARHGAP39Q9C0H5 1083 aa16.79■□□□□ 0.28
TUBE1-211ENST00000605457 TCP11L1Q9NUJ3 509 aa16.79■□□□□ 0.28
TUBE1-211ENST00000605457 STX8Q9UNK0 236 aa16.79■□□□□ 0.28
TUBE1-211ENST00000605457 SPDYE16A6NNV3 312 aaPredicted RBP16.78■□□□□ 0.28
TUBE1-211ENST00000605457 F5H6K3 240 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 RAD21O60216 631 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 NDUFB10O96000 172 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 CTGFP29279 349 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 KLRC3Q07444 240 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 LBX2Q6XYB7 198 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 TNS4Q8IZW8 715 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 GMCL1P1Q8NEA9 526 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 GTF3C2Q8WUA4 911 aaPredicted RBP16.78■□□□□ 0.28
TUBE1-211ENST00000605457 TXNRD2Q9NNW7 524 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 ANO2Q9NQ90 1003 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 MORF4L1Q9UBU8 362 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 PLXNB2O15031 1838 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 B4E1Z4 1266 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 KDM4AO75164 1064 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 KIF22Q14807 665 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 KRT23Q9C075 422 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 MCOLN1Q9GZU1 580 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 CNNM2Q9H8M5 875 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 EFCC1Q9HA90 598 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 TRIM17Q9Y577 477 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 TAF6LQ9Y6J9 622 aa16.78■□□□□ 0.28
TUBE1-211ENST00000605457 COG2Q14746 738 aa16.77■□□□□ 0.27
TUBE1-211ENST00000605457 FAM83BQ5T0W9 1011 aa16.77■□□□□ 0.27
TUBE1-211ENST00000605457 TRIM47Q96LD4 638 aa16.77■□□□□ 0.27
TUBE1-211ENST00000605457 RBPJLQ9UBG7 517 aa16.77■□□□□ 0.27
TUBE1-211ENST00000605457 MYPNQ86TC9 1320 aa16.76■□□□□ 0.27
TUBE1-211ENST00000605457 PEX10O60683 326 aa16.76■□□□□ 0.27
TUBE1-211ENST00000605457 FLOT1O75955 427 aa16.76■□□□□ 0.27
TUBE1-211ENST00000605457 PSMC4P43686 418 aa16.76■□□□□ 0.27
TUBE1-211ENST00000605457 ARHGEF6Q15052 776 aa16.76■□□□□ 0.27
TUBE1-211ENST00000605457 PKN2Q16513 984 aaKnown RBP16.76■□□□□ 0.27
TUBE1-211ENST00000605457 RCSD1Q6JBY9 416 aa16.76■□□□□ 0.27
TUBE1-211ENST00000605457 NUP88Q99567 741 aaPredicted RBP16.76■□□□□ 0.27
TUBE1-211ENST00000605457 ZSWIM5Q9P217 1185 aa16.76■□□□□ 0.27
TUBE1-211ENST00000605457 E7EWF7 191 aa16.75■□□□□ 0.27
TUBE1-211ENST00000605457 CNMDO75829 334 aa16.75■□□□□ 0.27
TUBE1-211ENST00000605457 ECM2O94769 699 aaPredicted RBP16.75■□□□□ 0.27
TUBE1-211ENST00000605457 GNRH1P01148 92 aa16.75■□□□□ 0.27
TUBE1-211ENST00000605457 ERVK-9P63128 1117 aa16.75■□□□□ 0.27
TUBE1-211ENST00000605457 ERVK-24P63145 666 aa16.75■□□□□ 0.27
TUBE1-211ENST00000605457 NECTIN1Q15223 517 aa16.75■□□□□ 0.27
TUBE1-211ENST00000605457 STOX1Q6ZVD7 989 aa16.75■□□□□ 0.27
TUBE1-211ENST00000605457 IQCA1Q86XH1 822 aa16.75■□□□□ 0.27
TUBE1-211ENST00000605457 ZKSCAN3Q9BRR0 538 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms