RNA–Protein interactions for RNA: ENST00000605216.5

ZSWIM8-223, Transcript of zinc finger SWIM-type containing 8, human

APPRIS P2 TSL 1 (best) BASIC

Gene ZSWIM8, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZSWIM8-223	ENST00000605216	ORC6	Q9Y5N6	252 aa		18.81	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	RRAGA	Q7L523	313 aa		18.81	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	SART1	O43290	800 aa	Known RBP	18.81	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	NR1I2	O75469	434 aa		18.81	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	CABP7	Q86V35	215 aa		18.81	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	TYW1	Q9NV66	732 aa	Known RBP	18.81	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	GPC4	O75487	556 aa		18.81	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	POLK	Q9UBT6	870 aa		18.81	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	NUB1	Q9Y5A7	615 aa		18.81	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	ASPH	Q12797	758 aa		18.8	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	CSRNP1	Q96S65	589 aa		18.8	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	OTUD6A	Q7L8S5	288 aa		18.8	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	CADPS2	Q86UW7	1296 aa		18.8	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	LSM14B	Q9BX40	385 aa	Known RBP	18.8	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	CHML	P26374	656 aa		18.8	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	LRMP	Q12912	555 aa		18.8	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	TSTA3	Q13630	321 aa	Predicted RBP	18.8	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	GPIHBP1	Q8IV16	184 aa		18.8	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	ZYX	Q15942	572 aa	Known RBP	18.8	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	CERS3	Q8IU89	383 aa		18.8	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	DRC3	Q9H069	523 aa		18.8	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	DIS3L2	Q8IYB7	885 aa	Known RBP	18.8	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	CCDC124	Q96CT7	223 aa	Known RBP	18.8	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	IWS1	Q96ST2	819 aa		18.8	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	LZTS2	Q9BRK4	669 aa		18.8	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	PFDN1	O60925	122 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	ATF7	P17544	494 aa	Predicted RBP	18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	LMNB1	P20700	586 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	POSTN	Q15063	836 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	DEPTOR	Q8TB45	409 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	SAR1B	Q9Y6B6	198 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	MTX1	Q13505	466 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	NOP9	Q86U38	636 aa	Known RBP	18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	SPC25	Q9HBM1	224 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	TRIM35	Q9UPQ4	493 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	KRIT1	O00522	736 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	GNGT2	O14610	69 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	PPP2R5A	Q15172	486 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	ZNF408	Q9H9D4	720 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	UFL1	O94874	794 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	ABL1	P00519	1130 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	SAT1	P21673	171 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	RAB44	Q7Z6P3	723 aa	Predicted RBP	18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	CDKL2	Q92772	493 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	NFE2L3	Q9Y4A8	694 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	HECW1	Q76N89	1606 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	THAP12	O43422	761 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	RSBN1L	Q6PCB5	846 aa	Predicted RBP	18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	LCA5	Q86VQ0	697 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	ZMAT2	Q96NC0	199 aa	Known RBP	18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	MIS12	Q9H081	205 aa		18.79	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	STAT1	P42224	750 aa		18.78	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	ECE1	P42892	770 aa		18.78	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	BRD3	Q15059	726 aa		18.78	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	ARMT1	Q9H993	441 aa		18.78	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	ANGPTL3	Q9Y5C1	460 aa		18.78	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	SLC1A4	P43007	532 aa		18.78	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	BBOF1	Q8ND07	529 aa		18.78	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	TRIM58	Q8NG06	486 aa		18.78	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	PLEKHA4	Q9H4M7	779 aa		18.78	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	CBX8	Q9HC52	389 aa		18.78	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	ANAPC5	Q9UJX4	755 aa		18.78	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	WDR97	A6NE52	1622 aa		18.78	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	AP1AR	Q63HQ0	302 aa		18.78	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	PCDHB15	Q9Y5E8	787 aa		18.78	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	HIBADH	P31937	336 aa	Known RBP	18.78	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	PRPSAP1	Q14558	356 aa		18.78	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	CCDC51	Q96ER9	411 aa		18.78	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	ZNF202	O95125	648 aa		18.77	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	STX1B	P61266	288 aa		18.77	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	FAM207A	Q9NSI2	230 aa	Predicted RBP	18.77	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	LRRD1	A4D1F6	860 aa		18.77	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	NSMF	Q6X4W1	530 aa		18.77	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	LRRC8C	Q8TDW0	803 aa		18.77	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	TNNC2	P02585	160 aa		18.77	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	USH1G	Q495M9	461 aa		18.77	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	CEP85	Q6P2H3	762 aa		18.77	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	NT5C3A	Q9H0P0	336 aa		18.77	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	ANGEL1	Q9UNK9	670 aa	Known RBP	18.77	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	KCNK3	O14649	394 aa		18.77	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	BEGAIN	Q9BUH8	593 aa		18.77	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	HYOU1	Q9Y4L1	999 aa		18.77	■□□□□ 0.6
ZSWIM8-223	ENST00000605216	C2CD5	Q86YS7	1000 aa		18.77	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	HNRNPCL2	B2RXH8	293 aa		18.76	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	HNRNPCL1	O60812	293 aa	Known RBP	18.76	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	RASEF	Q8IZ41	740 aa		18.76	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	NLRC4	Q9NPP4	1024 aa		18.76	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	RINT1	Q6NUQ1	792 aa		18.76	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	NLRX1	Q86UT6	975 aa		18.76	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	NME8	Q8N427	588 aa		18.76	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	MYRIP	Q8NFW9	859 aa		18.76	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	DCTPP1	Q9H773	170 aa		18.76	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	EPS15L1	Q9UBC2	864 aa		18.76	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	ATF2	P15336	505 aa		18.76	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	POLR2B	P30876	1174 aa	Known RBP	18.76	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	RALGAPB	Q86X10	1494 aa		18.76	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	ABCB4	P21439	1286 aa		18.76	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	ZSCAN26	Q16670	478 aa		18.76	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	CWF19L2	Q2TBE0	894 aa	Known RBP	18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms