RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 PAGE5Q96GU1 130 aa13.99□□□□□ -0.17
CDCA3-212ENST00000604599 JADE2Q9NQC1 790 aa13.99□□□□□ -0.17
CDCA3-212ENST00000604599 UBR1Q8IWV7 1749 aa13.99□□□□□ -0.17
CDCA3-212ENST00000604599 EYA2O00167 538 aa13.98□□□□□ -0.17
CDCA3-212ENST00000604599 PES1O00541 588 aaKnown RBP13.98□□□□□ -0.17
CDCA3-212ENST00000604599 TMEM67Q5HYA8 995 aa13.98□□□□□ -0.17
CDCA3-212ENST00000604599 KIAA1328Q86T90 577 aa13.98□□□□□ -0.17
CDCA3-212ENST00000604599 OXER1Q8TDS5 423 aa13.98□□□□□ -0.17
CDCA3-212ENST00000604599 AENQ8WTP8 325 aaKnown RBP13.98□□□□□ -0.17
CDCA3-212ENST00000604599 ARL8AQ96BM9 186 aa13.98□□□□□ -0.17
CDCA3-212ENST00000604599 GPR108Q9NPR9 543 aa13.98□□□□□ -0.17
CDCA3-212ENST00000604599 MST1RQ04912 1400 aa13.98□□□□□ -0.17
CDCA3-212ENST00000604599 SEMA3EO15041 775 aa13.98□□□□□ -0.17
CDCA3-212ENST00000604599 ZEB2O60315 1214 aa13.98□□□□□ -0.17
CDCA3-212ENST00000604599 UBXN1Q04323 297 aa13.98□□□□□ -0.17
CDCA3-212ENST00000604599 LRP10Q7Z4F1 713 aa13.98□□□□□ -0.17
CDCA3-212ENST00000604599 SH2D3CQ8N5H7 860 aa13.98□□□□□ -0.17
CDCA3-212ENST00000604599 SH3GL2Q99962 352 aa13.98□□□□□ -0.17
CDCA3-212ENST00000604599 CABP5Q9NP86 173 aa13.98□□□□□ -0.17
CDCA3-212ENST00000604599 TTC26A0AVF1 554 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 ZFYP08048 801 aaPredicted RBP13.97□□□□□ -0.17
CDCA3-212ENST00000604599 GPTP24298 496 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 FNTAP49354 379 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 PPARAQ07869 468 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 TTMPQ5BVD1 217 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 KCTD16Q68DU8 428 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 ZNF579Q8NAF0 562 aaKnown RBP13.97□□□□□ -0.17
CDCA3-212ENST00000604599 RPGRIP1Q96KN7 1286 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 BLZF1Q9H2G9 400 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 STRN4Q9NRL3 753 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 DMGDHQ9UI17 866 aaKnown RBP13.97□□□□□ -0.17
CDCA3-212ENST00000604599 FAM205CA6NFA0 338 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 GOLGA8KD6RF30 607 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 IDEP14735 1019 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 SLC7A5Q01650 507 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 GIMAP7Q8NHV1 300 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 RUFY1Q96T51 708 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 LY9Q9HBG7 655 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 MAPK8IP1Q9UQF2 711 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 MACROD2A1Z1Q3 448 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 MATR3P43243 847 aaKnown RBP eCLIP13.97□□□□□ -0.17
CDCA3-212ENST00000604599 TDO2P48775 406 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 RRAGBQ5VZM2 374 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 TICAM2Q86XR7 235 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 IGDCC4Q8TDY8 1250 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 SYMPKQ92797 1274 aaKnown RBP13.97□□□□□ -0.17
CDCA3-212ENST00000604599 LACRTQ9GZZ8 138 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 LIMA1Q9UHB6 759 aaKnown RBP13.97□□□□□ -0.17
CDCA3-212ENST00000604599 SLC12A7Q9Y666 1083 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 DUSP10Q9Y6W6 482 aa13.97□□□□□ -0.17
CDCA3-212ENST00000604599 SIPA1L3O60292 1781 aaPredicted RBP13.96□□□□□ -0.17
CDCA3-212ENST00000604599 RCCD1A6NED2 376 aa13.96□□□□□ -0.17
CDCA3-212ENST00000604599 KCNJ18B7U540 433 aa13.96□□□□□ -0.17
CDCA3-212ENST00000604599 FMNL1O95466 1100 aaPredicted RBP13.96□□□□□ -0.17
CDCA3-212ENST00000604599 TRIM14Q14142 442 aa13.96□□□□□ -0.17
CDCA3-212ENST00000604599 KCNJ12Q14500 433 aa13.96□□□□□ -0.17
CDCA3-212ENST00000604599 TTF1Q15361 905 aaPredicted RBP13.96□□□□□ -0.17
CDCA3-212ENST00000604599 PLPPR3Q6T4P5 718 aa13.96□□□□□ -0.17
CDCA3-212ENST00000604599 TSEN2Q8NCE0 465 aaKnown RBP13.96□□□□□ -0.17
CDCA3-212ENST00000604599 XAGE2Q96GT9 111 aa13.96□□□□□ -0.17
CDCA3-212ENST00000604599 VPS54Q9P1Q0 977 aa13.96□□□□□ -0.17
CDCA3-212ENST00000604599 CEP126Q9P2H0 1117 aa13.96□□□□□ -0.17
CDCA3-212ENST00000604599 MEFVO15553 781 aaPredicted RBP13.96□□□□□ -0.18
CDCA3-212ENST00000604599 KIF1CO43896 1103 aaKnown RBP13.96□□□□□ -0.18
CDCA3-212ENST00000604599 SCP2P22307 547 aa13.96□□□□□ -0.18
CDCA3-212ENST00000604599 ATP2B2Q01814 1243 aa13.96□□□□□ -0.18
CDCA3-212ENST00000604599 B4GALNT4Q76KP1 1039 aa13.96□□□□□ -0.18
CDCA3-212ENST00000604599 OR8K1Q8NGG5 319 aa13.96□□□□□ -0.18
CDCA3-212ENST00000604599 GSDMAQ96QA5 445 aa13.96□□□□□ -0.18
CDCA3-212ENST00000604599 LRRC1Q9BTT6 524 aa13.96□□□□□ -0.18
CDCA3-212ENST00000604599 SPEF2Q9C093 1822 aa13.96□□□□□ -0.18
CDCA3-212ENST00000604599 NFAT5O94916 1531 aa13.95□□□□□ -0.18
CDCA3-212ENST00000604599 RDXP35241 583 aaKnown RBP13.95□□□□□ -0.18
CDCA3-212ENST00000604599 TCP11X2Q5H9J9 407 aa13.95□□□□□ -0.18
CDCA3-212ENST00000604599 CCDC70Q6NSX1 233 aa13.95□□□□□ -0.18
CDCA3-212ENST00000604599 ZKSCAN4Q969J2 545 aaPredicted RBP13.95□□□□□ -0.18
CDCA3-212ENST00000604599 CCDC85AQ96PX6 553 aaPredicted RBP13.95□□□□□ -0.18
CDCA3-212ENST00000604599 CENPHQ9H3R5 247 aa13.95□□□□□ -0.18
CDCA3-212ENST00000604599 WDR17Q8IZU2 1322 aa13.95□□□□□ -0.18
CDCA3-212ENST00000604599 ARFGEF2Q9Y6D5 1785 aa13.95□□□□□ -0.18
CDCA3-212ENST00000604599 IFIT3O14879 490 aaKnown RBP13.95□□□□□ -0.18
CDCA3-212ENST00000604599 KRT86O43790 486 aa13.95□□□□□ -0.18
CDCA3-212ENST00000604599 OPA1O60313 960 aa13.95□□□□□ -0.18
CDCA3-212ENST00000604599 RNF187Q5TA31 235 aaPredicted RBP13.95□□□□□ -0.18
CDCA3-212ENST00000604599 FOXP1Q9H334 677 aaPredicted RBP13.95□□□□□ -0.18
CDCA3-212ENST00000604599 CEP131Q9UPN4 1083 aa13.95□□□□□ -0.18
CDCA3-212ENST00000604599 LUC7L2Q9Y383 392 aaKnown RBP13.95□□□□□ -0.18
CDCA3-212ENST00000604599 FSBPO95073 299 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 KRT14P02533 472 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 WDR59Q6PJI9 974 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 SH3RF1Q7Z6J0 888 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 TRIM22Q8IYM9 498 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 TMEM87BQ96K49 555 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 PSMB7Q99436 277 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 STK36Q9NRP7 1315 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 GUCY1A3Q02108 690 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 PAK1Q13153 545 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 AMOTL1Q8IY63 956 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 WASF1Q92558 559 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 ZKSCAN3Q9BRR0 538 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms