RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 GPKOWQ92917 476 aaPredicted RBP eCLIP17.3■□□□□ 0.36
CCDC12-211ENST00000604367 TTC12Q9H892 705 aaPredicted RBP17.3■□□□□ 0.36
CCDC12-211ENST00000604367 MYH1P12882 1939 aa17.3■□□□□ 0.36
CCDC12-211ENST00000604367 CCDC178Q5BJE1 867 aa17.29■□□□□ 0.36
CCDC12-211ENST00000604367 CEP57L1Q8IYX8 460 aa17.29■□□□□ 0.36
CCDC12-211ENST00000604367 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.29■□□□□ 0.36
CCDC12-211ENST00000604367 MAD2L2Q9UI95 211 aa17.29■□□□□ 0.36
CCDC12-211ENST00000604367 DDX60LQ5H9U9 1706 aaKnown RBP17.29■□□□□ 0.36
CCDC12-211ENST00000604367 SNED1Q8TER0 1413 aa17.29■□□□□ 0.36
CCDC12-211ENST00000604367 WNT7AO00755 349 aa17.29■□□□□ 0.36
CCDC12-211ENST00000604367 PTPREP23469 700 aa17.29■□□□□ 0.36
CCDC12-211ENST00000604367 NT5C2P49902 561 aa17.29■□□□□ 0.36
CCDC12-211ENST00000604367 GRM4Q14833 912 aa17.29■□□□□ 0.36
CCDC12-211ENST00000604367 LONRF3Q496Y0 759 aa17.29■□□□□ 0.36
CCDC12-211ENST00000604367 CEP131Q9UPN4 1083 aa17.29■□□□□ 0.36
CCDC12-211ENST00000604367 TRIM75PA6NK02 468 aa17.28■□□□□ 0.36
CCDC12-211ENST00000604367 ADAMTS3O15072 1205 aa17.28■□□□□ 0.36
CCDC12-211ENST00000604367 TIGD1Q96MW7 591 aa17.28■□□□□ 0.36
CCDC12-211ENST00000604367 DDX4Q9NQI0 724 aaKnown RBP17.28■□□□□ 0.36
CCDC12-211ENST00000604367 USP40Q9NVE5 1235 aa17.28■□□□□ 0.36
CCDC12-211ENST00000604367 SUGT1Q9Y2Z0 365 aa17.28■□□□□ 0.36
CCDC12-211ENST00000604367 TNS1Q9HBL0 1735 aaKnown RBP17.28■□□□□ 0.36
CCDC12-211ENST00000604367 PNOCQ13519 176 aa17.28■□□□□ 0.36
CCDC12-211ENST00000604367 SLC15A2Q16348 729 aa17.28■□□□□ 0.36
CCDC12-211ENST00000604367 DHX40Q8IX18 779 aaKnown RBP17.28■□□□□ 0.36
CCDC12-211ENST00000604367 CNNM3Q8NE01 707 aa17.28■□□□□ 0.36
CCDC12-211ENST00000604367 NEDD1Q8NHV4 660 aa17.28■□□□□ 0.36
CCDC12-211ENST00000604367 CEP95Q96GE4 821 aa17.28■□□□□ 0.36
CCDC12-211ENST00000604367 NAT10Q9H0A0 1025 aaKnown RBP17.28■□□□□ 0.36
CCDC12-211ENST00000604367 CPVLQ9H3G5 476 aa17.28■□□□□ 0.36
CCDC12-211ENST00000604367 FAM237AA0A1B0GTK4 181 aa17.27■□□□□ 0.36
CCDC12-211ENST00000604367 ZNF174Q15697 407 aa17.27■□□□□ 0.36
CCDC12-211ENST00000604367 PIK3AP1Q6ZUJ8 805 aa17.27■□□□□ 0.36
CCDC12-211ENST00000604367 DRC7Q8IY82 874 aa17.27■□□□□ 0.36
CCDC12-211ENST00000604367 AOPEPQ8N6M6 819 aa17.27■□□□□ 0.36
CCDC12-211ENST00000604367 CYTH3O43739 400 aa17.27■□□□□ 0.35
CCDC12-211ENST00000604367 PDILTQ8N807 584 aa17.27■□□□□ 0.35
CCDC12-211ENST00000604367 TNFRSF25Q93038 417 aa17.27■□□□□ 0.35
CCDC12-211ENST00000604367 CSRNP2Q9H175 543 aa17.27■□□□□ 0.35
CCDC12-211ENST00000604367 FAM13BQ9NYF5 915 aa17.27■□□□□ 0.35
CCDC12-211ENST00000604367 SRPRBQ9Y5M8 271 aaKnown RBP17.27■□□□□ 0.35
CCDC12-211ENST00000604367 SLC35G1Q2M3R5 365 aa17.26■□□□□ 0.35
CCDC12-211ENST00000604367 KRBA2Q6ZNG9 492 aa17.26■□□□□ 0.35
CCDC12-211ENST00000604367 USP49Q70CQ1 688 aa17.26■□□□□ 0.35
CCDC12-211ENST00000604367 KIAA0825Q8IV33 1275 aa17.26■□□□□ 0.35
CCDC12-211ENST00000604367 POLR2DO15514 142 aaKnown RBP17.26■□□□□ 0.35
CCDC12-211ENST00000604367 GNAQP50148 359 aa17.26■□□□□ 0.35
CCDC12-211ENST00000604367 ZNF75DP51815 510 aa17.26■□□□□ 0.35
CCDC12-211ENST00000604367 PODNQ7Z5L7 613 aa17.26■□□□□ 0.35
CCDC12-211ENST00000604367 METTL16Q86W50 562 aaKnown RBP17.26■□□□□ 0.35
CCDC12-211ENST00000604367 TEKT1Q969V4 418 aa17.26■□□□□ 0.35
CCDC12-211ENST00000604367 FOXN1O15353 648 aa17.25■□□□□ 0.35
CCDC12-211ENST00000604367 TYW1BQ6NUM6 668 aa17.25■□□□□ 0.35
CCDC12-211ENST00000604367 CDC42EP5Q6NZY7 148 aa17.25■□□□□ 0.35
CCDC12-211ENST00000604367 USP17L2Q6R6M4 530 aa17.25■□□□□ 0.35
CCDC12-211ENST00000604367 PLA2G4DQ86XP0 818 aa17.25■□□□□ 0.35
CCDC12-211ENST00000604367 PCDHAC2Q9Y5I4 1007 aa17.25■□□□□ 0.35
CCDC12-211ENST00000604367 SLX4Q8IY92 1834 aa17.25■□□□□ 0.35
CCDC12-211ENST00000604367 ADAMTSL1Q8N6G6 1762 aa17.25■□□□□ 0.35
CCDC12-211ENST00000604367 PALM3A6NDB9 673 aaPredicted RBP17.25■□□□□ 0.35
CCDC12-211ENST00000604367 KLRF2D3W0D1 207 aa17.25■□□□□ 0.35
CCDC12-211ENST00000604367 ZNF500O60304 480 aaPredicted RBP17.25■□□□□ 0.35
CCDC12-211ENST00000604367 EIF6P56537 245 aaKnown RBP17.25■□□□□ 0.35
CCDC12-211ENST00000604367 NLRP12P59046 1061 aa17.25■□□□□ 0.35
CCDC12-211ENST00000604367 TTC38Q5R3I4 469 aa17.25■□□□□ 0.35
CCDC12-211ENST00000604367 STYK1Q6J9G0 422 aa17.25■□□□□ 0.35
CCDC12-211ENST00000604367 HEATR3Q7Z4Q2 680 aa17.25■□□□□ 0.35
CCDC12-211ENST00000604367 RASGRP4Q8TDF6 673 aa17.25■□□□□ 0.35
CCDC12-211ENST00000604367 PDGFDQ9GZP0 370 aaPredicted RBP17.25■□□□□ 0.35
CCDC12-211ENST00000604367 STK32BQ9NY57 414 aa17.25■□□□□ 0.35
CCDC12-211ENST00000604367 NFIAQ12857 509 aa17.24■□□□□ 0.35
CCDC12-211ENST00000604367 APOBEC3HQ6NTF7 200 aaKnown RBP17.24■□□□□ 0.35
CCDC12-211ENST00000604367 CLEC10AQ8IUN9 316 aa17.24■□□□□ 0.35
CCDC12-211ENST00000604367 GOLGA6L6A8MZA4 724 aa17.23■□□□□ 0.35
CCDC12-211ENST00000604367 ECE2O60344 883 aa17.23■□□□□ 0.35
CCDC12-211ENST00000604367 SLURP2P0DP57 97 aa17.23■□□□□ 0.35
CCDC12-211ENST00000604367 CRKP46108 304 aa17.23■□□□□ 0.35
CCDC12-211ENST00000604367 CACNB3P54284 484 aa17.23■□□□□ 0.35
CCDC12-211ENST00000604367 ZNF579Q8NAF0 562 aaKnown RBP17.23■□□□□ 0.35
CCDC12-211ENST00000604367 CAMKK2Q96RR4 588 aa17.23■□□□□ 0.35
CCDC12-211ENST00000604367 FOCADQ5VW36 1801 aa17.23■□□□□ 0.35
CCDC12-211ENST00000604367 PARP1P09874 1014 aaKnown RBP17.23■□□□□ 0.35
CCDC12-211ENST00000604367 AKR1B1P15121 316 aa17.23■□□□□ 0.35
CCDC12-211ENST00000604367 RBM5P52756 815 aaKnown RBP eCLIP17.23■□□□□ 0.35
CCDC12-211ENST00000604367 PTGDRQ13258 359 aa17.23■□□□□ 0.35
CCDC12-211ENST00000604367 WWC2Q6AWC2 1192 aa17.23■□□□□ 0.35
CCDC12-211ENST00000604367 HHIPL2Q6UWX4 724 aa17.23■□□□□ 0.35
CCDC12-211ENST00000604367 HOMER1Q86YM7 354 aa17.23■□□□□ 0.35
CCDC12-211ENST00000604367 FOXP4Q8IVH2 680 aaPredicted RBP17.23■□□□□ 0.35
CCDC12-211ENST00000604367 BLIDQ8IZY5 108 aa17.23■□□□□ 0.35
CCDC12-211ENST00000604367 VAT1LQ9HCJ6 419 aa17.23■□□□□ 0.35
CCDC12-211ENST00000604367 SERTAD1Q9UHV2 236 aa17.23■□□□□ 0.35
CCDC12-211ENST00000604367 SERPINB13Q9UIV8 391 aa17.23■□□□□ 0.35
CCDC12-211ENST00000604367 TUBE1Q9UJT0 475 aa17.23■□□□□ 0.35
CCDC12-211ENST00000604367 TOP1P11387 765 aaKnown RBP17.22■□□□□ 0.35
CCDC12-211ENST00000604367 CALML3P27482 149 aa17.22■□□□□ 0.35
CCDC12-211ENST00000604367 MCM7P33993 719 aa17.22■□□□□ 0.35
CCDC12-211ENST00000604367 GABPAQ06546 454 aa17.22■□□□□ 0.35
CCDC12-211ENST00000604367 KIAA2012Q0VF49 1180 aa17.22■□□□□ 0.35
CCDC12-211ENST00000604367 AOC3Q16853 763 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms