RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 TROVE2P10155 538 aaKnown RBP eCLIP23.3■■□□□ 1.32
SH3D19-211ENST00000604030 HSPA1LP34931 641 aa23.3■■□□□ 1.32
SH3D19-211ENST00000604030 STAT1P42224 750 aa23.3■■□□□ 1.32
SH3D19-211ENST00000604030 RNF10Q8N5U6 811 aaKnown RBP23.3■■□□□ 1.32
SH3D19-211ENST00000604030 PSMD1Q99460 953 aa23.3■■□□□ 1.32
SH3D19-211ENST00000604030 HAUS7Q99871 368 aa23.3■■□□□ 1.32
SH3D19-211ENST00000604030 YWHAEP62258 255 aaKnown RBP23.3■■□□□ 1.32
SH3D19-211ENST00000604030 MAP7Q14244 749 aa23.3■■□□□ 1.32
SH3D19-211ENST00000604030 SDCCAG8Q86SQ7 713 aaPredicted RBP23.3■■□□□ 1.32
SH3D19-211ENST00000604030 TRMT44Q8IYL2 757 aaKnown RBP23.3■■□□□ 1.32
SH3D19-211ENST00000604030 CCDC169A6NNP5 214 aa23.29■■□□□ 1.32
SH3D19-211ENST00000604030 NEURL1BA8MQ27 555 aa23.29■■□□□ 1.32
SH3D19-211ENST00000604030 SLC8A1P32418 973 aa23.29■■□□□ 1.32
SH3D19-211ENST00000604030 ZAP70P43403 619 aa23.29■■□□□ 1.32
SH3D19-211ENST00000604030 ZNF131P52739 623 aa23.29■■□□□ 1.32
SH3D19-211ENST00000604030 ANKRD20A3Q5VUR7 823 aa23.29■■□□□ 1.32
SH3D19-211ENST00000604030 TYW1BQ6NUM6 668 aa23.29■■□□□ 1.32
SH3D19-211ENST00000604030 C2CD5Q86YS7 1000 aa23.29■■□□□ 1.32
SH3D19-211ENST00000604030 ARHGEF2Q92974 986 aaKnown RBP23.29■■□□□ 1.32
SH3D19-211ENST00000604030 EIF4G3O43432 1585 aaKnown RBP23.29■■□□□ 1.32
SH3D19-211ENST00000604030 CTNNA1P35221 906 aaKnown RBP23.29■■□□□ 1.32
SH3D19-211ENST00000604030 ADKP55263 362 aaKnown RBP23.29■■□□□ 1.32
SH3D19-211ENST00000604030 NCAPH2Q6IBW4 605 aa23.29■■□□□ 1.32
SH3D19-211ENST00000604030 SRGAP1Q7Z6B7 1085 aa23.29■■□□□ 1.32
SH3D19-211ENST00000604030 TBC1D22AQ8WUA7 517 aa23.29■■□□□ 1.32
SH3D19-211ENST00000604030 CCT6BQ92526 530 aa23.29■■□□□ 1.32
SH3D19-211ENST00000604030 USP44Q9H0E7 712 aa23.29■■□□□ 1.32
SH3D19-211ENST00000604030 KCNJ14Q9UNX9 436 aa23.29■■□□□ 1.32
SH3D19-211ENST00000604030 MIPOL1Q8TD10 442 aa23.29■■□□□ 1.32
SH3D19-211ENST00000604030 CUEDC2Q9H467 287 aa23.29■■□□□ 1.32
SH3D19-211ENST00000604030 PLEKHG3A1L390 1219 aa23.29■■□□□ 1.32
SH3D19-211ENST00000604030 MYOCDQ8IZQ8 938 aa23.29■■□□□ 1.32
SH3D19-211ENST00000604030 ZBTB21Q9ULJ3 1066 aa23.29■■□□□ 1.32
SH3D19-211ENST00000604030 GNGT1P63211 74 aa23.28■■□□□ 1.32
SH3D19-211ENST00000604030 KLHDC4Q8TBB5 520 aa23.28■■□□□ 1.32
SH3D19-211ENST00000604030 TRIM31Q9BZY9 425 aa23.28■■□□□ 1.32
SH3D19-211ENST00000604030 TPCN1Q9ULQ1 816 aa23.28■■□□□ 1.32
SH3D19-211ENST00000604030 DPH6Q7L8W6 267 aa23.28■■□□□ 1.32
SH3D19-211ENST00000604030 METTL14Q9HCE5 456 aaKnown RBP23.28■■□□□ 1.32
SH3D19-211ENST00000604030 RNASE9P60153 205 aaKnown RBP23.28■■□□□ 1.32
SH3D19-211ENST00000604030 PPARAQ07869 468 aa23.28■■□□□ 1.32
SH3D19-211ENST00000604030 LONRF2Q1L5Z9 754 aa23.28■■□□□ 1.32
SH3D19-211ENST00000604030 VEZTQ9HBM0 779 aa23.28■■□□□ 1.32
SH3D19-211ENST00000604030 PPP6R2O75170 966 aa23.28■■□□□ 1.32
SH3D19-211ENST00000604030 KRT15P19012 456 aa23.28■■□□□ 1.32
SH3D19-211ENST00000604030 BBOF1Q8ND07 529 aa23.28■■□□□ 1.32
SH3D19-211ENST00000604030 CAPS2Q9BXY5 557 aa23.28■■□□□ 1.32
SH3D19-211ENST00000604030 SPATA31E1Q6ZUB1 1445 aa23.28■■□□□ 1.32
SH3D19-211ENST00000604030 CTDSPL2Q05D32 466 aa23.27■■□□□ 1.32
SH3D19-211ENST00000604030 TMOD4Q9NZQ9 345 aa23.27■■□□□ 1.32
SH3D19-211ENST00000604030 CDC23Q9UJX2 597 aa23.27■■□□□ 1.32
SH3D19-211ENST00000604030 PARP3Q9Y6F1 533 aa23.27■■□□□ 1.32
SH3D19-211ENST00000604030 PHLPP2Q6ZVD8 1323 aa23.27■■□□□ 1.32
SH3D19-211ENST00000604030 PHLDB3Q6NSJ2 640 aa23.27■■□□□ 1.32
SH3D19-211ENST00000604030 TSC1Q92574 1164 aa23.27■■□□□ 1.32
SH3D19-211ENST00000604030 TYW1Q9NV66 732 aaKnown RBP23.27■■□□□ 1.32
SH3D19-211ENST00000604030 KLHL14Q9P2G3 628 aa23.27■■□□□ 1.32
SH3D19-211ENST00000604030 DDAH1O94760 285 aa23.27■■□□□ 1.32
SH3D19-211ENST00000604030 LONP1P36776 959 aaKnown RBP23.27■■□□□ 1.32
SH3D19-211ENST00000604030 CUL4AQ13619 759 aa23.27■■□□□ 1.32
SH3D19-211ENST00000604030 DCUN1D2Q6PH85 259 aa23.27■■□□□ 1.32
SH3D19-211ENST00000604030 RPUSD2Q8IZ73 545 aaKnown RBP23.27■■□□□ 1.32
SH3D19-211ENST00000604030 VTI1AQ96AJ9 217 aa23.27■■□□□ 1.32
SH3D19-211ENST00000604030 GPR108Q9NPR9 543 aa23.27■■□□□ 1.32
SH3D19-211ENST00000604030 PCDHA7Q9UN72 937 aa23.27■■□□□ 1.32
SH3D19-211ENST00000604030 XRCC5P13010 732 aaKnown RBP23.26■■□□□ 1.31
SH3D19-211ENST00000604030 STX2P32856 288 aa23.26■■□□□ 1.31
SH3D19-211ENST00000604030 MYCT1Q8N699 235 aa23.26■■□□□ 1.31
SH3D19-211ENST00000604030 GGA1Q9UJY5 639 aa23.26■■□□□ 1.31
SH3D19-211ENST00000604030 BLIDQ8IZY5 108 aa23.26■■□□□ 1.31
SH3D19-211ENST00000604030 ATP2A3Q93084 1043 aa23.26■■□□□ 1.31
SH3D19-211ENST00000604030 GSDMAQ96QA5 445 aa23.26■■□□□ 1.31
SH3D19-211ENST00000604030 FAM207AQ9NSI2 230 aaPredicted RBP23.26■■□□□ 1.31
SH3D19-211ENST00000604030 ADCY9O60503 1353 aa23.26■■□□□ 1.31
SH3D19-211ENST00000604030 MAP2K2P36507 400 aa23.26■■□□□ 1.31
SH3D19-211ENST00000604030 SH2D4BQ5SQS7 431 aa23.26■■□□□ 1.31
SH3D19-211ENST00000604030 CNBD1Q8NA66 436 aa23.26■■□□□ 1.31
SH3D19-211ENST00000604030 MRPL44Q9H9J2 332 aaKnown RBP23.26■■□□□ 1.31
SH3D19-211ENST00000604030 SAP30BPQ9UHR5 308 aaKnown RBP23.26■■□□□ 1.31
SH3D19-211ENST00000604030 GCC2Q8IWJ2 1684 aa23.26■■□□□ 1.31
SH3D19-211ENST00000604030 RETREG2Q8NC44 543 aa23.26■■□□□ 1.31
SH3D19-211ENST00000604030 DYMQ7RTS9 669 aa23.26■■□□□ 1.31
SH3D19-211ENST00000604030 VPS54Q9P1Q0 977 aa23.26■■□□□ 1.31
SH3D19-211ENST00000604030 PCDHB13Q9Y5F0 798 aa23.26■■□□□ 1.31
SH3D19-211ENST00000604030 GCNT3O95395 438 aa23.25■■□□□ 1.31
SH3D19-211ENST00000604030 PHBP35232 272 aa23.25■■□□□ 1.31
SH3D19-211ENST00000604030 SLC1A4P43007 532 aa23.25■■□□□ 1.31
SH3D19-211ENST00000604030 TRAPPC10P48553 1259 aa23.25■■□□□ 1.31
SH3D19-211ENST00000604030 MAP4K1Q92918 833 aa23.25■■□□□ 1.31
SH3D19-211ENST00000604030 MYL10Q9BUA6 226 aa23.25■■□□□ 1.31
SH3D19-211ENST00000604030 LSM14BQ9BX40 385 aaKnown RBP23.25■■□□□ 1.31
SH3D19-211ENST00000604030 UFL1O94874 794 aa23.25■■□□□ 1.31
SH3D19-211ENST00000604030 HOOK2Q96ED9 719 aa23.25■■□□□ 1.31
SH3D19-211ENST00000604030 BZW2Q9Y6E2 419 aaKnown RBP23.25■■□□□ 1.31
SH3D19-211ENST00000604030 ATP7AQ04656 1500 aa23.25■■□□□ 1.31
SH3D19-211ENST00000604030 MED23Q9ULK4 1368 aa23.25■■□□□ 1.31
SH3D19-211ENST00000604030 LAD1O00515 517 aa23.25■■□□□ 1.31
SH3D19-211ENST00000604030 PTH1RQ03431 593 aa23.25■■□□□ 1.31
SH3D19-211ENST00000604030 ZNF594Q96JF6 807 aaPredicted RBP23.25■■□□□ 1.31
SH3D19-211ENST00000604030 LONRF3Q496Y0 759 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms