RNA–Protein interactions for RNA: ENST00000603038.1

CHCHD2P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 3, humanhuman

BASIC

Gene CHCHD2P3, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2P3-201ENST00000603038 LNPKQ9C0E8 428 aa18.8■□□□□ 0.6
CHCHD2P3-201ENST00000603038 ARPP21Q9UBL0 812 aaPredicted RBP18.8■□□□□ 0.6
CHCHD2P3-201ENST00000603038 ATP2B2Q01814 1243 aa18.79■□□□□ 0.6
CHCHD2P3-201ENST00000603038 PRPF38BQ5VTL8 546 aaKnown RBP18.79■□□□□ 0.6
CHCHD2P3-201ENST00000603038 GPR142Q7Z601 462 aa18.79■□□□□ 0.6
CHCHD2P3-201ENST00000603038 U2AF1L4Q8WU68 220 aaKnown RBP18.79■□□□□ 0.6
CHCHD2P3-201ENST00000603038 TRIB2Q92519 343 aa18.79■□□□□ 0.6
CHCHD2P3-201ENST00000603038 USP6NLQ92738 828 aa18.79■□□□□ 0.6
CHCHD2P3-201ENST00000603038 ZBTB47Q9UFB7 747 aaPredicted RBP18.79■□□□□ 0.6
CHCHD2P3-201ENST00000603038 FOXP2O15409 715 aa18.78■□□□□ 0.6
CHCHD2P3-201ENST00000603038 PRDM1O75626 825 aa18.78■□□□□ 0.6
CHCHD2P3-201ENST00000603038 SGPL1O95470 568 aa18.78■□□□□ 0.6
CHCHD2P3-201ENST00000603038 MAPK4P31152 587 aa18.78■□□□□ 0.6
CHCHD2P3-201ENST00000603038 COG2Q14746 738 aa18.78■□□□□ 0.6
CHCHD2P3-201ENST00000603038 MORN1Q5T089 497 aa18.78■□□□□ 0.6
CHCHD2P3-201ENST00000603038 LBX2Q6XYB7 198 aa18.78■□□□□ 0.6
CHCHD2P3-201ENST00000603038 PLEKHH3Q7Z736 793 aa18.78■□□□□ 0.6
CHCHD2P3-201ENST00000603038 SMC5Q8IY18 1101 aa18.78■□□□□ 0.6
CHCHD2P3-201ENST00000603038 GTF3C2Q8WUA4 911 aaPredicted RBP18.78■□□□□ 0.6
CHCHD2P3-201ENST00000603038 DEFB118Q96PH6 123 aa18.78■□□□□ 0.6
CHCHD2P3-201ENST00000603038 NUDT12Q9BQG2 462 aa18.78■□□□□ 0.6
CHCHD2P3-201ENST00000603038 VCPKMTQ9H867 229 aa18.78■□□□□ 0.6
CHCHD2P3-201ENST00000603038 ARHGEF10LQ9HCE6 1279 aa18.78■□□□□ 0.6
CHCHD2P3-201ENST00000603038 GNAT2P19087 354 aa18.77■□□□□ 0.6
CHCHD2P3-201ENST00000603038 TDO2P48775 406 aa18.77■□□□□ 0.6
CHCHD2P3-201ENST00000603038 CCL14Q16627 93 aa18.77■□□□□ 0.6
CHCHD2P3-201ENST00000603038 CCAR1Q8IX12 1150 aaKnown RBP18.77■□□□□ 0.6
CHCHD2P3-201ENST00000603038 TANGO6Q9C0B7 1094 aa18.77■□□□□ 0.6
CHCHD2P3-201ENST00000603038 RWDD1Q9H446 243 aaPredicted RBP18.77■□□□□ 0.6
CHCHD2P3-201ENST00000603038 KANSL2Q9H9L4 492 aa18.77■□□□□ 0.6
CHCHD2P3-201ENST00000603038 MKNK2Q9HBH9 465 aa18.77■□□□□ 0.6
CHCHD2P3-201ENST00000603038 DSG3P32926 999 aa18.76■□□□□ 0.59
CHCHD2P3-201ENST00000603038 LRRFIP1Q32MZ4 808 aaKnown RBP18.76■□□□□ 0.59
CHCHD2P3-201ENST00000603038 SAMD1Q6SPF0 538 aaPredicted RBP18.76■□□□□ 0.59
CHCHD2P3-201ENST00000603038 UBE2Q1Q7Z7E8 422 aa18.76■□□□□ 0.59
CHCHD2P3-201ENST00000603038 INCENPQ9NQS7 918 aa18.76■□□□□ 0.59
CHCHD2P3-201ENST00000603038 PAK6Q9NQU5 681 aaPredicted RBP18.76■□□□□ 0.59
CHCHD2P3-201ENST00000603038 HOXC10Q9NYD6 342 aa18.76■□□□□ 0.59
CHCHD2P3-201ENST00000603038 TACC3Q9Y6A5 838 aa18.76■□□□□ 0.59
CHCHD2P3-201ENST00000603038 CEP290O15078 2479 aa18.75■□□□□ 0.59
CHCHD2P3-201ENST00000603038 HMGCRP04035 888 aa18.75■□□□□ 0.59
CHCHD2P3-201ENST00000603038 AAMPQ13685 434 aa18.75■□□□□ 0.59
CHCHD2P3-201ENST00000603038 VPS53Q5VIR6 699 aa18.75■□□□□ 0.59
CHCHD2P3-201ENST00000603038 WDR78Q5VTH9 848 aa18.75■□□□□ 0.59
CHCHD2P3-201ENST00000603038 NKX2-3Q8TAU0 364 aa18.75■□□□□ 0.59
CHCHD2P3-201ENST00000603038 EVI5LQ96CN4 794 aa18.75■□□□□ 0.59
CHCHD2P3-201ENST00000603038 ATG4CQ96DT6 458 aa18.75■□□□□ 0.59
CHCHD2P3-201ENST00000603038 MOV10L1Q9BXT6 1211 aaKnown RBP18.75■□□□□ 0.59
CHCHD2P3-201ENST00000603038 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.75■□□□□ 0.59
CHCHD2P3-201ENST00000603038 FBXO28Q9NVF7 368 aa18.75■□□□□ 0.59
CHCHD2P3-201ENST00000603038 GREB1LQ9C091 1923 aaPredicted RBP18.74■□□□□ 0.59
CHCHD2P3-201ENST00000603038 ROBO3Q96MS0 1386 aa18.74■□□□□ 0.59
CHCHD2P3-201ENST00000603038 IGKV6D-41A0A0C4DH26 115 aa18.74■□□□□ 0.59
CHCHD2P3-201ENST00000603038 TFRCP02786 760 aaKnown RBP18.74■□□□□ 0.59
CHCHD2P3-201ENST00000603038 XRCC5P13010 732 aaKnown RBP18.74■□□□□ 0.59
CHCHD2P3-201ENST00000603038 PTPREP23469 700 aa18.74■□□□□ 0.59
CHCHD2P3-201ENST00000603038 IRX6P78412 446 aaPredicted RBP18.74■□□□□ 0.59
CHCHD2P3-201ENST00000603038 LPAR1Q92633 364 aa18.74■□□□□ 0.59
CHCHD2P3-201ENST00000603038 FAM227BQ96M60 508 aa18.74■□□□□ 0.59
CHCHD2P3-201ENST00000603038 CRISPLD2Q9H0B8 497 aa18.74■□□□□ 0.59
CHCHD2P3-201ENST00000603038 FLRT1Q9NZU1 646 aa18.74■□□□□ 0.59
CHCHD2P3-201ENST00000603038 RAD21O60216 631 aa18.73■□□□□ 0.59
CHCHD2P3-201ENST00000603038 FLOT1O75955 427 aa18.73■□□□□ 0.59
CHCHD2P3-201ENST00000603038 CCNA1P78396 465 aa18.73■□□□□ 0.59
CHCHD2P3-201ENST00000603038 NUCB1Q02818 461 aa18.73■□□□□ 0.59
CHCHD2P3-201ENST00000603038 MAP2K5Q13163 448 aa18.73■□□□□ 0.59
CHCHD2P3-201ENST00000603038 MAP3K21Q5TCX8 1036 aa18.73■□□□□ 0.59
CHCHD2P3-201ENST00000603038 CHD1LQ86WJ1 897 aa18.73■□□□□ 0.59
CHCHD2P3-201ENST00000603038 PLEKHM2Q8IWE5 1019 aa18.73■□□□□ 0.59
CHCHD2P3-201ENST00000603038 ZNF444Q8N0Y2 327 aaPredicted RBP18.73■□□□□ 0.59
CHCHD2P3-201ENST00000603038 NPLOC4Q8TAT6 608 aa18.73■□□□□ 0.59
CHCHD2P3-201ENST00000603038 SOCS4Q8WXH5 440 aa18.73■□□□□ 0.59
CHCHD2P3-201ENST00000603038 NUP88Q99567 741 aaPredicted RBP18.73■□□□□ 0.59
CHCHD2P3-201ENST00000603038 CLIP2Q9UDT6 1046 aa18.73■□□□□ 0.59
CHCHD2P3-201ENST00000603038 RPTORQ8N122 1335 aa18.73■□□□□ 0.59
CHCHD2P3-201ENST00000603038 A0A0D9SFI3 127 aa18.72■□□□□ 0.59
CHCHD2P3-201ENST00000603038 WDR46O15213 610 aaKnown RBP18.72■□□□□ 0.59
CHCHD2P3-201ENST00000603038 RGS2P41220 211 aa18.72■□□□□ 0.59
CHCHD2P3-201ENST00000603038 CTDSPL2Q05D32 466 aa18.72■□□□□ 0.59
CHCHD2P3-201ENST00000603038 PPARAQ07869 468 aa18.72■□□□□ 0.59
CHCHD2P3-201ENST00000603038 CACNB2Q08289 660 aaPredicted RBP18.72■□□□□ 0.59
CHCHD2P3-201ENST00000603038 FAM47AQ5JRC9 791 aa18.72■□□□□ 0.59
CHCHD2P3-201ENST00000603038 FAM83BQ5T0W9 1011 aa18.72■□□□□ 0.59
CHCHD2P3-201ENST00000603038 NACAP1Q9BZK3 213 aa18.72■□□□□ 0.59
CHCHD2P3-201ENST00000603038 SPATC1LQ9H0A9 340 aa18.72■□□□□ 0.59
CHCHD2P3-201ENST00000603038 NAPBQ9H115 298 aa18.72■□□□□ 0.59
CHCHD2P3-201ENST00000603038 SH2D4AQ9H788 454 aa18.72■□□□□ 0.59
CHCHD2P3-201ENST00000603038 CWC22Q9HCG8 908 aaKnown RBP18.72■□□□□ 0.59
CHCHD2P3-201ENST00000603038 HMX1Q9NP08 348 aaPredicted RBP18.72■□□□□ 0.59
CHCHD2P3-201ENST00000603038 NYAP2Q9P242 653 aa18.72■□□□□ 0.59
CHCHD2P3-201ENST00000603038 PARP14Q460N5 1801 aa18.72■□□□□ 0.59
CHCHD2P3-201ENST00000603038 SLC15A5A6NIM6 579 aa18.71■□□□□ 0.59
CHCHD2P3-201ENST00000603038 F5H6K3 240 aa18.71■□□□□ 0.59
CHCHD2P3-201ENST00000603038 FARP2O94887 1054 aaPredicted RBP18.71■□□□□ 0.59
CHCHD2P3-201ENST00000603038 PRKAR2AP13861 404 aaKnown RBP18.71■□□□□ 0.59
CHCHD2P3-201ENST00000603038 ERCC3P19447 782 aa18.71■□□□□ 0.59
CHCHD2P3-201ENST00000603038 KLRC3Q07444 240 aa18.71■□□□□ 0.59
CHCHD2P3-201ENST00000603038 PLS1Q14651 629 aa18.71■□□□□ 0.59
CHCHD2P3-201ENST00000603038 TMEM132BQ14DG7 1078 aa18.71■□□□□ 0.59
CHCHD2P3-201ENST00000603038 CEP95Q96GE4 821 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms