RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 HAUS8Q9BT25 410 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 GPAA1O43292 621 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 TXKP42681 527 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 RBBP5Q15291 538 aaKnown RBP10.58□□□□□ -0.72
CSMD1-217ENST00000602723 DZIP3Q86Y13 1208 aaKnown RBP10.58□□□□□ -0.72
CSMD1-217ENST00000602723 ARHGAP4P98171 946 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 SNX29Q8TEQ0 813 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 ACSBG1Q96GR2 724 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 PLXNC1O60486 1568 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 SERPINB6P35237 376 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 MORC3Q14149 939 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 KRT25Q7Z3Z0 450 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 NFATC2IPQ8NCF5 419 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 SDCCAG3Q96C92 435 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 EFCC1Q9HA90 598 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 LMBRD1Q9NUN5 540 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 FBXO31Q5XUX0 539 aaPredicted RBP10.58□□□□□ -0.72
CSMD1-217ENST00000602723 OTUD7AQ8TE49 926 aaPredicted RBP10.58□□□□□ -0.72
CSMD1-217ENST00000602723 MYO1AQ9UBC5 1043 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 UGGT2Q9NYU1 1516 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 KRT3P12035 628 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 PEX19P40855 299 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 PLCB4Q15147 1175 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 ZC3H12CQ9C0D7 883 aaKnown RBP10.58□□□□□ -0.72
CSMD1-217ENST00000602723 PICK1Q9NRD5 415 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 FAF1Q9UNN5 650 aaPredicted RBP10.58□□□□□ -0.72
CSMD1-217ENST00000602723 VAMP4O75379 141 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 MAST1Q9Y2H9 1570 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 KCNK3O14649 394 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 NCAPGQ9BPX3 1015 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 DENND2AQ9ULE3 1009 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 ADCY8P40145 1251 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 TTC6Q86TZ1 520 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 CXorf38Q8TB03 319 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 EFCAB8A8MWE9 144 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 XRCC5P13010 732 aaKnown RBP10.57□□□□□ -0.72
CSMD1-217ENST00000602723 P4HA1P13674 534 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 PALM2Q8IXS6 379 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 CARD10Q9BWT7 1032 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 SPDL1Q96EA4 605 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 LARSQ9P2J5 1176 aaKnown RBP10.57□□□□□ -0.72
CSMD1-217ENST00000602723 TPTE2Q6XPS3 522 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 DIS3L2Q8IYB7 885 aaKnown RBP10.57□□□□□ -0.72
CSMD1-217ENST00000602723 TSPYL6Q8N831 410 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 PDE11AQ9HCR9 933 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 THEGQ9P2T0 379 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 PPP1R9AQ9ULJ8 1098 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 FRMD3A2A2Y4 597 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 YWHAEP62258 255 aaKnown RBP10.57□□□□□ -0.72
CSMD1-217ENST00000602723 ZBTB17Q13105 803 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 GSTA1P08263 222 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 GSTA2P09210 222 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 CCDC93Q567U6 631 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 AP1ARQ63HQ0 302 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 CERS3Q8IU89 383 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 PDZD8Q8NEN9 1154 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 TNNI3KQ59H18 835 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 GRK7Q8WTQ7 553 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 U2AF1L4Q8WU68 220 aaKnown RBP10.57□□□□□ -0.72
CSMD1-217ENST00000602723 SNX14Q9Y5W7 946 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 FPGT-TNNI3KV9GXZ4 949 aa10.57□□□□□ -0.72
CSMD1-217ENST00000602723 MAEAQ7L5Y9 396 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 BLZF1Q9H2G9 400 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 CD19P15391 556 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 LAMC3Q9Y6N6 1575 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 NSFL1CQ9UNZ2 370 aaKnown RBP10.56□□□□□ -0.72
CSMD1-217ENST00000602723 STAM2O75886 525 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 TNNQ9UQP3 1299 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 EVI5O60447 810 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 KDM3AQ9Y4C1 1321 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 OR8K1Q8NGG5 319 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 FAM227BQ96M60 508 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 ARMT1Q9H993 441 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 LRWD1Q9UFC0 647 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 NPATQ14207 1427 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 PFDN1O60925 122 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 NBPF14Q5TI25 921 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 CFAP61Q8NHU2 1237 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 SCYL1Q96KG9 808 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 HYOU1Q9Y4L1 999 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 SPECC1L-ADORA2AF8WAN1 911 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 KRT19P08727 400 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 ATF7P17544 494 aaPredicted RBP10.56□□□□□ -0.72
CSMD1-217ENST00000602723 EYA3Q99504 573 aa10.56□□□□□ -0.72
CSMD1-217ENST00000602723 SGSM2O43147 1006 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 DNAJC8O75937 253 aaPredicted RBP10.55□□□□□ -0.72
CSMD1-217ENST00000602723 SLC1A4P43007 532 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 EIF6P56537 245 aaKnown RBP10.55□□□□□ -0.72
CSMD1-217ENST00000602723 CADPS2Q86UW7 1296 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 MRPL46Q9H2W6 279 aaKnown RBP10.55□□□□□ -0.72
CSMD1-217ENST00000602723 GINS2Q9Y248 185 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 DKC1O60832 514 aaKnown RBP eCLIP10.55□□□□□ -0.722e-6■■■■■ 36
CSMD1-217ENST00000602723 GRM1Q13255 1194 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 HAUS1Q96CS2 278 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 BAG5Q9UL15 447 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 KRT40Q6A162 431 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 TYW1Q9NV66 732 aaKnown RBP10.55□□□□□ -0.72
CSMD1-217ENST00000602723 PPP2R2CQ9Y2T4 447 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 SUN1O94901 812 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 JADE1Q6IE81 842 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms