RNA–Protein interactions for RNA: ENST00000602698.5

HCG18-247, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 573 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-247ENST00000602698 ZKSCAN1P17029 563 aaPredicted RBP11.52□□□□□ -0.57
HCG18-247ENST00000602698 C12orf60Q5U649 245 aa11.52□□□□□ -0.57
HCG18-247ENST00000602698 C16orf86Q6ZW13 317 aa11.52□□□□□ -0.57
HCG18-247ENST00000602698 AMOTL1Q8IY63 956 aa11.52□□□□□ -0.57
HCG18-247ENST00000602698 TRMT44Q8IYL2 757 aaKnown RBP11.52□□□□□ -0.57
HCG18-247ENST00000602698 ANKLE1Q8NAG6 615 aa11.52□□□□□ -0.57
HCG18-247ENST00000602698 DIS3LQ8TF46 1054 aaKnown RBP11.52□□□□□ -0.57
HCG18-247ENST00000602698 DDRGK1Q96HY6 314 aa11.52□□□□□ -0.57
HCG18-247ENST00000602698 GPATCH3Q96I76 525 aa11.52□□□□□ -0.57
HCG18-247ENST00000602698 PUS7LQ9H0K6 701 aaKnown RBP11.52□□□□□ -0.57
HCG18-247ENST00000602698 CWC22Q9HCG8 908 aaKnown RBP11.52□□□□□ -0.57
HCG18-247ENST00000602698 BTBD7Q9P203 1132 aa11.52□□□□□ -0.57
HCG18-247ENST00000602698 SLC4A4Q9Y6R1 1079 aa11.52□□□□□ -0.57
HCG18-247ENST00000602698 USP17L12C9JPN9 530 aa11.51□□□□□ -0.57
HCG18-247ENST00000602698 USP17L21D6R901 530 aa11.51□□□□□ -0.57
HCG18-247ENST00000602698 CDK8P49336 464 aa11.51□□□□□ -0.57
HCG18-247ENST00000602698 ICA1Q05084 483 aa11.51□□□□□ -0.57
HCG18-247ENST00000602698 MAP2K5Q13163 448 aa11.51□□□□□ -0.57
HCG18-247ENST00000602698 CCL14Q16627 93 aa11.51□□□□□ -0.57
HCG18-247ENST00000602698 KIAA1755Q5JYT7 1200 aa11.51□□□□□ -0.57
HCG18-247ENST00000602698 TSHZ3Q63HK5 1081 aa11.51□□□□□ -0.57
HCG18-247ENST00000602698 CLEC10AQ8IUN9 316 aa11.51□□□□□ -0.57
HCG18-247ENST00000602698 KBTBD3Q8NAB2 608 aa11.51□□□□□ -0.57
HCG18-247ENST00000602698 PAWRQ96IZ0 340 aaKnown RBP11.51□□□□□ -0.57
HCG18-247ENST00000602698 TANGO6Q9C0B7 1094 aa11.51□□□□□ -0.57
HCG18-247ENST00000602698 ARHGEF10LQ9HCE6 1279 aa11.51□□□□□ -0.57
HCG18-247ENST00000602698 SLC15A5A6NIM6 579 aa11.5□□□□□ -0.57
HCG18-247ENST00000602698 GLRX3O76003 335 aaKnown RBP11.5□□□□□ -0.57
HCG18-247ENST00000602698 PTPREP23469 700 aa11.5□□□□□ -0.57
HCG18-247ENST00000602698 MNX1P50219 401 aaPredicted RBP11.5□□□□□ -0.57
HCG18-247ENST00000602698 FXR1P51114 621 aaKnown RBP eCLIP11.5□□□□□ -0.57
HCG18-247ENST00000602698 CACNB2Q08289 660 aaPredicted RBP11.5□□□□□ -0.57
HCG18-247ENST00000602698 GRB14Q14449 540 aa11.5□□□□□ -0.57
HCG18-247ENST00000602698 COG2Q14746 738 aa11.5□□□□□ -0.57
HCG18-247ENST00000602698 WDR78Q5VTH9 848 aa11.5□□□□□ -0.57
HCG18-247ENST00000602698 CTR9Q6PD62 1173 aa11.5□□□□□ -0.57
HCG18-247ENST00000602698 CHRDL2Q6WN34 429 aa11.5□□□□□ -0.57
HCG18-247ENST00000602698 NECAB2Q7Z6G3 386 aa11.5□□□□□ -0.57
HCG18-247ENST00000602698 SIAH1Q8IUQ4 282 aa11.5□□□□□ -0.57
HCG18-247ENST00000602698 LPAR1Q92633 364 aa11.5□□□□□ -0.57
HCG18-247ENST00000602698 CCDC17Q96LX7 622 aa11.5□□□□□ -0.57
HCG18-247ENST00000602698 STRBPQ96SI9 672 aaKnown RBP11.5□□□□□ -0.57
HCG18-247ENST00000602698 SH2D4AQ9H788 454 aa11.5□□□□□ -0.57
HCG18-247ENST00000602698 PCDH10Q9P2E7 1040 aa11.5□□□□□ -0.57
HCG18-247ENST00000602698 ARPP21Q9UBL0 812 aaPredicted RBP11.5□□□□□ -0.57
HCG18-247ENST00000602698 OGDHLQ9ULD0 1010 aa11.5□□□□□ -0.57
HCG18-247ENST00000602698 TMX2Q9Y320 296 aa11.5□□□□□ -0.57
HCG18-247ENST00000602698 NR2E3Q9Y5X4 410 aa11.5□□□□□ -0.57
HCG18-247ENST00000602698 ROBO3Q96MS0 1386 aa11.5□□□□□ -0.57
HCG18-247ENST00000602698 EVI5O60447 810 aa11.49□□□□□ -0.57
HCG18-247ENST00000602698 APPBP2Q92624 585 aa11.49□□□□□ -0.57
HCG18-247ENST00000602698 OSBP2Q969R2 916 aa11.49□□□□□ -0.57
HCG18-247ENST00000602698 VCPKMTQ9H867 229 aa11.49□□□□□ -0.57
HCG18-247ENST00000602698 HOXC10Q9NYD6 342 aa11.49□□□□□ -0.57
HCG18-247ENST00000602698 PCDHB15Q9Y5E8 787 aa11.49□□□□□ -0.57
HCG18-247ENST00000602698 IVNS1ABPQ9Y6Y0 642 aa11.49□□□□□ -0.57
HCG18-247ENST00000602698 GSG1L2A8MUP6 293 aa11.48□□□□□ -0.57
HCG18-247ENST00000602698 WDR46O15213 610 aaKnown RBP11.48□□□□□ -0.57
HCG18-247ENST00000602698 RNF113AO15541 343 aaKnown RBP11.48□□□□□ -0.57
HCG18-247ENST00000602698 FLOT1O75955 427 aa11.48□□□□□ -0.57
HCG18-247ENST00000602698 ZFYP08048 801 aaPredicted RBP11.48□□□□□ -0.57
HCG18-247ENST00000602698 HOXC6P09630 235 aa11.48□□□□□ -0.57
HCG18-247ENST00000602698 CCND3P30281 292 aaPredicted RBP11.48□□□□□ -0.57
HCG18-247ENST00000602698 DSG3P32926 999 aa11.48□□□□□ -0.57
HCG18-247ENST00000602698 RRP1P56182 461 aaKnown RBP11.48□□□□□ -0.57
HCG18-247ENST00000602698 SBK1Q52WX2 424 aa11.48□□□□□ -0.57
HCG18-247ENST00000602698 GIMAP6Q6P9H5 292 aa11.48□□□□□ -0.57
HCG18-247ENST00000602698 SPICE1Q8N0Z3 855 aa11.48□□□□□ -0.57
HCG18-247ENST00000602698 MB21D1Q8N884 522 aa11.48□□□□□ -0.57
HCG18-247ENST00000602698 SHCBP1Q8NEM2 672 aa11.48□□□□□ -0.57
HCG18-247ENST00000602698 MOV10L1Q9BXT6 1211 aaKnown RBP11.48□□□□□ -0.57
HCG18-247ENST00000602698 NBPF3Q9H094 633 aa11.48□□□□□ -0.57
HCG18-247ENST00000602698 SPATC1LQ9H0A9 340 aa11.48□□□□□ -0.57
HCG18-247ENST00000602698 PRO3102Q9H379 93 aa11.48□□□□□ -0.57
HCG18-247ENST00000602698 FLRT1Q9NZU1 646 aa11.48□□□□□ -0.57
HCG18-247ENST00000602698 RBM27Q9P2N5 1060 aaKnown RBP11.48□□□□□ -0.57
HCG18-247ENST00000602698 TTC41PQ6P2S7 1318 aa11.48□□□□□ -0.57
HCG18-247ENST00000602698 SMCHD1A6NHR9 2005 aa11.48□□□□□ -0.57
HCG18-247ENST00000602698 GPAA1O43292 621 aa11.47□□□□□ -0.57
HCG18-247ENST00000602698 EEF2P13639 858 aaKnown RBP11.47□□□□□ -0.57
HCG18-247ENST00000602698 MFSD14CQ5VZR4 134 aa11.47□□□□□ -0.57
HCG18-247ENST00000602698 LHX8Q68G74 356 aa11.47□□□□□ -0.57
HCG18-247ENST00000602698 NPLOC4Q8TAT6 608 aa11.47□□□□□ -0.57
HCG18-247ENST00000602698 PI4K2BQ8TCG2 481 aa11.47□□□□□ -0.57
HCG18-247ENST00000602698 ATG4CQ96DT6 458 aa11.47□□□□□ -0.57
HCG18-247ENST00000602698 C11orf49Q9H6J7 331 aa11.47□□□□□ -0.57
HCG18-247ENST00000602698 KANSL2Q9H9L4 492 aa11.47□□□□□ -0.57
HCG18-247ENST00000602698 EPB41L4AQ9HCS5 686 aaPredicted RBP11.47□□□□□ -0.57
HCG18-247ENST00000602698 PFASO15067 1338 aa11.46□□□□□ -0.57
HCG18-247ENST00000602698 M0R2C6 588 aa11.46□□□□□ -0.57
HCG18-247ENST00000602698 ERC2O15083 957 aa11.46□□□□□ -0.57
HCG18-247ENST00000602698 STRNO43815 780 aa11.46□□□□□ -0.57
HCG18-247ENST00000602698 IGHA2P01877 340 aa11.46□□□□□ -0.57
HCG18-247ENST00000602698 GNAT2P19087 354 aa11.46□□□□□ -0.57
HCG18-247ENST00000602698 ERCC3P19447 782 aa11.46□□□□□ -0.57
HCG18-247ENST00000602698 RASA1P20936 1047 aa11.46□□□□□ -0.57
HCG18-247ENST00000602698 ADORA2AP29274 412 aa11.46□□□□□ -0.57
HCG18-247ENST00000602698 ATP2B2Q01814 1243 aa11.46□□□□□ -0.57
HCG18-247ENST00000602698 LRRFIP1Q32MZ4 808 aaKnown RBP11.46□□□□□ -0.57
HCG18-247ENST00000602698 OTUD7AQ8TE49 926 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms