RNA–Protein interactions for RNA: ENST00000602499.5

UBE2E3-207, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-207ENST00000602499 BEGAINQ9BUH8 593 aa25.89■■□□□ 1.74
UBE2E3-207ENST00000602499 ATP2B2Q01814 1243 aa25.88■■□□□ 1.73
UBE2E3-207ENST00000602499 PABPC4Q13310 644 aaKnown RBP eCLIP25.88■■□□□ 1.732e-7■■■■■ 32.3
UBE2E3-207ENST00000602499 DGKHQ86XP1 1220 aa25.88■■□□□ 1.73
UBE2E3-207ENST00000602499 FAM43AQ8N2R8 423 aa25.88■■□□□ 1.73
UBE2E3-207ENST00000602499 NKX2-3Q8TAU0 364 aa25.88■■□□□ 1.73
UBE2E3-207ENST00000602499 VCPKMTQ9H867 229 aa25.88■■□□□ 1.73
UBE2E3-207ENST00000602499 RNF186Q9NXI6 227 aa25.88■■□□□ 1.73
UBE2E3-207ENST00000602499 HOXA7P31268 230 aaPredicted RBP25.87■■□□□ 1.73
UBE2E3-207ENST00000602499 ANKS1AQ92625 1134 aa25.87■■□□□ 1.73
UBE2E3-207ENST00000602499 MTA3Q9BTC8 594 aa25.87■■□□□ 1.73
UBE2E3-207ENST00000602499 GOPCQ9HD26 462 aa25.87■■□□□ 1.73
UBE2E3-207ENST00000602499 STX8Q9UNK0 236 aa25.87■■□□□ 1.73
UBE2E3-207ENST00000602499 MYH4Q9Y623 1939 aa25.86■■□□□ 1.73
UBE2E3-207ENST00000602499 PDHXO00330 501 aa25.86■■□□□ 1.73
UBE2E3-207ENST00000602499 NMT2O60551 498 aa25.86■■□□□ 1.73
UBE2E3-207ENST00000602499 MCCP23508 829 aa25.86■■□□□ 1.73
UBE2E3-207ENST00000602499 RASEFQ8IZ41 740 aa25.86■■□□□ 1.73
UBE2E3-207ENST00000602499 ZSCAN10Q96SZ4 725 aaPredicted RBP25.86■■□□□ 1.73
UBE2E3-207ENST00000602499 ZYXQ15942 572 aaKnown RBP25.85■■□□□ 1.73
UBE2E3-207ENST00000602499 TREML2Q5T2D2 321 aa25.85■■□□□ 1.73
UBE2E3-207ENST00000602499 MB21D2Q8IYB1 491 aaPredicted RBP25.85■■□□□ 1.73
UBE2E3-207ENST00000602499 GMCL1P1Q8NEA9 526 aa25.85■■□□□ 1.73
UBE2E3-207ENST00000602499 PRDM10Q9NQV6 1147 aa25.85■■□□□ 1.73
UBE2E3-207ENST00000602499 TOP1P11387 765 aaKnown RBP25.84■■□□□ 1.73
UBE2E3-207ENST00000602499 VCAM1P19320 739 aa25.84■■□□□ 1.73
UBE2E3-207ENST00000602499 DGKZQ13574 1117 aa25.84■■□□□ 1.73
UBE2E3-207ENST00000602499 RCSD1Q6JBY9 416 aa25.84■■□□□ 1.73
UBE2E3-207ENST00000602499 CYB5R4Q7L1T6 521 aa25.84■■□□□ 1.73
UBE2E3-207ENST00000602499 UBAC1Q9BSL1 405 aa25.84■■□□□ 1.73
UBE2E3-207ENST00000602499 PNMA3Q9UL41 463 aa25.84■■□□□ 1.73
UBE2E3-207ENST00000602499 F5H6K3 240 aa25.83■■□□□ 1.73
UBE2E3-207ENST00000602499 TRPA1O75762 1119 aa25.83■■□□□ 1.73
UBE2E3-207ENST00000602499 HMGB1P09429 215 aaKnown RBP25.83■■□□□ 1.73
UBE2E3-207ENST00000602499 MCM5P33992 734 aa25.83■■□□□ 1.73
UBE2E3-207ENST00000602499 KLRC3Q07444 240 aa25.83■■□□□ 1.73
UBE2E3-207ENST00000602499 NEK1Q96PY6 1258 aa25.83■■□□□ 1.73
UBE2E3-207ENST00000602499 SNX14Q9Y5W7 946 aa25.83■■□□□ 1.73
UBE2E3-207ENST00000602499 USP17L15C9J2P7 530 aa25.82■■□□□ 1.72
UBE2E3-207ENST00000602499 USP17L13C9JLJ4 530 aa25.82■■□□□ 1.72
UBE2E3-207ENST00000602499 USP17L11C9JVI0 530 aa25.82■■□□□ 1.72
UBE2E3-207ENST00000602499 USP17L18D6R9N7 530 aa25.82■■□□□ 1.72
UBE2E3-207ENST00000602499 USP17L22D6RA61 530 aa25.82■■□□□ 1.72
UBE2E3-207ENST00000602499 USP17L17D6RBQ6 530 aa25.82■■□□□ 1.72
UBE2E3-207ENST00000602499 USP17L19D6RCP7 530 aa25.82■■□□□ 1.72
UBE2E3-207ENST00000602499 USP17L20D6RJB6 530 aa25.82■■□□□ 1.72
UBE2E3-207ENST00000602499 WDR46O15213 610 aaKnown RBP25.82■■□□□ 1.72
UBE2E3-207ENST00000602499 OSBPP22059 807 aa25.82■■□□□ 1.72
UBE2E3-207ENST00000602499 USP17L24Q0WX57 530 aa25.82■■□□□ 1.72
UBE2E3-207ENST00000602499 SART3Q15020 963 aaKnown RBP25.82■■□□□ 1.72
UBE2E3-207ENST00000602499 KIAA1755Q5JYT7 1200 aa25.82■■□□□ 1.72
UBE2E3-207ENST00000602499 ENAHQ8N8S7 591 aaPredicted RBP25.82■■□□□ 1.72
UBE2E3-207ENST00000602499 PARK7Q99497 189 aaKnown RBP25.82■■□□□ 1.72
UBE2E3-207ENST00000602499 TMEM47Q9BQJ4 181 aa25.82■■□□□ 1.72
UBE2E3-207ENST00000602499 ZKSCAN3Q9BRR0 538 aa25.82■■□□□ 1.72
UBE2E3-207ENST00000602499 ZFYVE28Q9HCC9 887 aa25.82■■□□□ 1.72
UBE2E3-207ENST00000602499 TNKSO95271 1327 aa25.82■■□□□ 1.72
UBE2E3-207ENST00000602499 SEC24BO95487 1268 aa25.81■■□□□ 1.72
UBE2E3-207ENST00000602499 TAF1CQ15572 869 aaPredicted RBP25.81■■□□□ 1.72
UBE2E3-207ENST00000602499 NOM1Q5C9Z4 860 aaKnown RBP25.81■■□□□ 1.72
UBE2E3-207ENST00000602499 CATSPERGQ6ZRH7 1159 aa25.81■■□□□ 1.72
UBE2E3-207ENST00000602499 WDR19Q8NEZ3 1342 aa25.81■■□□□ 1.72
UBE2E3-207ENST00000602499 ERICH2A1L162 156 aa25.8■■□□□ 1.72
UBE2E3-207ENST00000602499 NDUFB10O96000 172 aa25.8■■□□□ 1.72
UBE2E3-207ENST00000602499 SEC23AQ15436 765 aa25.8■■□□□ 1.72
UBE2E3-207ENST00000602499 LRRC47Q8N1G4 583 aaKnown RBP25.8■■□□□ 1.72
UBE2E3-207ENST00000602499 GMCL1Q96IK5 515 aa25.8■■□□□ 1.72
UBE2E3-207ENST00000602499 RPAP3Q9H6T3 665 aaPredicted RBP25.8■■□□□ 1.72
UBE2E3-207ENST00000602499 TLR2O60603 784 aa25.79■■□□□ 1.72
UBE2E3-207ENST00000602499 PSMA5P28066 241 aa25.79■■□□□ 1.72
UBE2E3-207ENST00000602499 CTCFP49711 727 aaPredicted RBP25.79■■□□□ 1.72
UBE2E3-207ENST00000602499 ANTXR2P58335 489 aa25.79■■□□□ 1.72
UBE2E3-207ENST00000602499 ANAPC15P60006 121 aa25.79■■□□□ 1.72
UBE2E3-207ENST00000602499 CRHR2Q13324 411 aa25.79■■□□□ 1.72
UBE2E3-207ENST00000602499 ADCK5Q3MIX3 580 aa25.79■■□□□ 1.72
UBE2E3-207ENST00000602499 SPICE1Q8N0Z3 855 aa25.79■■□□□ 1.72
UBE2E3-207ENST00000602499 IGDCC4Q8TDY8 1250 aa25.79■■□□□ 1.72
UBE2E3-207ENST00000602499 TMEM87BQ96K49 555 aa25.79■■□□□ 1.72
UBE2E3-207ENST00000602499 ASCC2Q9H1I8 757 aaPredicted RBP25.79■■□□□ 1.72
UBE2E3-207ENST00000602499 IFIT3O14879 490 aaKnown RBP25.78■■□□□ 1.72
UBE2E3-207ENST00000602499 PRC1O43663 620 aa25.78■■□□□ 1.72
UBE2E3-207ENST00000602499 IRX3P78415 501 aaPredicted RBP25.78■■□□□ 1.72
UBE2E3-207ENST00000602499 IFIT1BQ5T764 474 aaKnown RBP25.78■■□□□ 1.72
UBE2E3-207ENST00000602499 SLFN13Q68D06 897 aa25.78■■□□□ 1.72
UBE2E3-207ENST00000602499 DHX32Q7L7V1 743 aaKnown RBP25.78■■□□□ 1.72
UBE2E3-207ENST00000602499 TMTC2Q8N394 836 aa25.78■■□□□ 1.72
UBE2E3-207ENST00000602499 IL17RAQ96F46 866 aa25.78■■□□□ 1.72
UBE2E3-207ENST00000602499 TBC1D8O95759 1140 aa25.77■■□□□ 1.72
UBE2E3-207ENST00000602499 LBX1P52954 281 aa25.77■■□□□ 1.72
UBE2E3-207ENST00000602499 EXOSC10Q01780 885 aaKnown RBP25.77■■□□□ 1.72
UBE2E3-207ENST00000602499 GTF3C2Q8WUA4 911 aaPredicted RBP25.77■■□□□ 1.72
UBE2E3-207ENST00000602499 TM6SF1Q9BZW5 370 aa25.77■■□□□ 1.72
UBE2E3-207ENST00000602499 KAT14Q9H8E8 782 aa25.77■■□□□ 1.72
UBE2E3-207ENST00000602499 HOXC10Q9NYD6 342 aa25.77■■□□□ 1.72
UBE2E3-207ENST00000602499 CYP2C8P10632 490 aa25.76■■□□□ 1.71
UBE2E3-207ENST00000602499 GCLCP48506 637 aaPredicted RBP25.76■■□□□ 1.71
UBE2E3-207ENST00000602499 COG2Q14746 738 aa25.76■■□□□ 1.71
UBE2E3-207ENST00000602499 TMEM67Q5HYA8 995 aa25.76■■□□□ 1.71
UBE2E3-207ENST00000602499 LBX2Q6XYB7 198 aa25.76■■□□□ 1.71
UBE2E3-207ENST00000602499 CHST3Q7LGC8 479 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms