RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 LPAR1Q92633 364 aa27.16■■□□□ 1.94
SSBP4-209ENST00000601357 GCC1Q96CN9 775 aa27.16■■□□□ 1.94
SSBP4-209ENST00000601357 ARHGEF10LQ9HCE6 1279 aa27.16■■□□□ 1.94
SSBP4-209ENST00000601357 EPB41L4AQ9HCS5 686 aaPredicted RBP27.16■■□□□ 1.94
SSBP4-209ENST00000601357 GNAT2P19087 354 aa27.15■■□□□ 1.94
SSBP4-209ENST00000601357 TRIM32Q13049 653 aa27.15■■□□□ 1.94
SSBP4-209ENST00000601357 PLEKHH3Q7Z736 793 aa27.15■■□□□ 1.94
SSBP4-209ENST00000601357 DEFB118Q96PH6 123 aa27.15■■□□□ 1.94
SSBP4-209ENST00000601357 CRISPLD2Q9H0B8 497 aa27.15■■□□□ 1.94
SSBP4-209ENST00000601357 CYP2B6P20813 491 aa27.14■■□□□ 1.94
SSBP4-209ENST00000601357 CCNA1P78396 465 aa27.14■■□□□ 1.94
SSBP4-209ENST00000601357 AAMPQ13685 434 aa27.14■■□□□ 1.94
SSBP4-209ENST00000601357 COG2Q14746 738 aa27.14■■□□□ 1.94
SSBP4-209ENST00000601357 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.14■■□□□ 1.94
SSBP4-209ENST00000601357 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.14■■□□□ 1.945e-6■■■□□ 19.2
SSBP4-209ENST00000601357 SH2D4AQ9H788 454 aa27.14■■□□□ 1.94
SSBP4-209ENST00000601357 VCPKMTQ9H867 229 aa27.14■■□□□ 1.94
SSBP4-209ENST00000601357 MAP3K21Q5TCX8 1036 aa27.13■■□□□ 1.93
SSBP4-209ENST00000601357 ANKRD45Q5TZF3 282 aa27.13■■□□□ 1.93
SSBP4-209ENST00000601357 CCAR1Q8IX12 1150 aaKnown RBP27.13■■□□□ 1.93
SSBP4-209ENST00000601357 TANGO6Q9C0B7 1094 aa27.13■■□□□ 1.93
SSBP4-209ENST00000601357 KANSL2Q9H9L4 492 aa27.13■■□□□ 1.93
SSBP4-209ENST00000601357 HOXC10Q9NYD6 342 aa27.13■■□□□ 1.93
SSBP4-209ENST00000601357 STAP2Q9UGK3 403 aa27.13■■□□□ 1.93
SSBP4-209ENST00000601357 RPTORQ8N122 1335 aa27.13■■□□□ 1.93
SSBP4-209ENST00000601357 EEF2P13639 858 aaKnown RBP27.12■■□□□ 1.93
SSBP4-209ENST00000601357 RASA1P20936 1047 aa27.12■■□□□ 1.93
SSBP4-209ENST00000601357 SEC62Q99442 399 aaKnown RBP27.12■■□□□ 1.93
SSBP4-209ENST00000601357 FSD1Q9BTV5 496 aa27.12■■□□□ 1.93
SSBP4-209ENST00000601357 SLC34A2O95436 690 aa27.11■■□□□ 1.93
SSBP4-209ENST00000601357 RGS2P41220 211 aa27.11■■□□□ 1.93
SSBP4-209ENST00000601357 ZMYM1Q5SVZ6 1142 aa27.11■■□□□ 1.93
SSBP4-209ENST00000601357 TRMT44Q8IYL2 757 aaKnown RBP27.11■■□□□ 1.93
SSBP4-209ENST00000601357 APBA2Q99767 749 aa27.11■■□□□ 1.93
SSBP4-209ENST00000601357 PATL2C9JE40 543 aaKnown RBP27.1■■□□□ 1.93
SSBP4-209ENST00000601357 FARP2O94887 1054 aaPredicted RBP27.1■■□□□ 1.93
SSBP4-209ENST00000601357 SPICE1Q8N0Z3 855 aa27.1■■□□□ 1.93
SSBP4-209ENST00000601357 HMX1Q9NP08 348 aaPredicted RBP27.1■■□□□ 1.93
SSBP4-209ENST00000601357 ZNF236Q9UL36 1845 aa27.1■■□□□ 1.93
SSBP4-209ENST00000601357 MINDY4BA8MYZ0 360 aa27.09■■□□□ 1.93
SSBP4-209ENST00000601357 WDR46O15213 610 aaKnown RBP27.09■■□□□ 1.93
SSBP4-209ENST00000601357 TFRCP02786 760 aaKnown RBP27.09■■□□□ 1.93
SSBP4-209ENST00000601357 PTPREP23469 700 aa27.09■■□□□ 1.93
SSBP4-209ENST00000601357 TDO2P48775 406 aa27.09■■□□□ 1.93
SSBP4-209ENST00000601357 MAP2K5Q13163 448 aa27.09■■□□□ 1.93
SSBP4-209ENST00000601357 IFNL3Q8IZI9 196 aa27.09■■□□□ 1.93
SSBP4-209ENST00000601357 ZBTB47Q9UFB7 747 aaPredicted RBP27.09■■□□□ 1.93
SSBP4-209ENST00000601357 SLC15A5A6NIM6 579 aa27.08■■□□□ 1.93
SSBP4-209ENST00000601357 PRKAR2AP13861 404 aaKnown RBP27.08■■□□□ 1.93
SSBP4-209ENST00000601357 ZKSCAN1P17029 563 aaPredicted RBP27.08■■□□□ 1.93
SSBP4-209ENST00000601357 DSG3P32926 999 aa27.08■■□□□ 1.93
SSBP4-209ENST00000601357 PDE1AP54750 535 aa27.08■■□□□ 1.93
SSBP4-209ENST00000601357 CCL14Q16627 93 aa27.08■■□□□ 1.93
SSBP4-209ENST00000601357 MB21D1Q8N884 522 aa27.08■■□□□ 1.93
SSBP4-209ENST00000601357 MKNK2Q9HBH9 465 aa27.08■■□□□ 1.93
SSBP4-209ENST00000601357 GRB14Q14449 540 aa27.07■■□□□ 1.92
SSBP4-209ENST00000601357 MOV10L1Q9BXT6 1211 aaKnown RBP27.07■■□□□ 1.92
SSBP4-209ENST00000601357 CWC22Q9HCG8 908 aaKnown RBP27.07■■□□□ 1.92
SSBP4-209ENST00000601357 FLOT1O75955 427 aa27.06■■□□□ 1.92
SSBP4-209ENST00000601357 APPP05067 770 aa27.06■■□□□ 1.92
SSBP4-209ENST00000601357 HOXC6P09630 235 aa27.06■■□□□ 1.92
SSBP4-209ENST00000601357 CACNB2Q08289 660 aaPredicted RBP27.06■■□□□ 1.92
SSBP4-209ENST00000601357 STK11IPQ8N1F8 1099 aa27.06■■□□□ 1.92
SSBP4-209ENST00000601357 SHCBP1Q8NEM2 672 aa27.06■■□□□ 1.92
SSBP4-209ENST00000601357 HTATIP2Q9BUP3 242 aa27.06■■□□□ 1.92
SSBP4-209ENST00000601357 SPATC1LQ9H0A9 340 aa27.06■■□□□ 1.92
SSBP4-209ENST00000601357 ADAMTS5Q9UNA0 930 aa27.06■■□□□ 1.92
SSBP4-209ENST00000601357 COL11A1P12107 1806 aaPredicted RBP27.05■■□□□ 1.92
SSBP4-209ENST00000601357 IGKV6D-41A0A0C4DH26 115 aa27.05■■□□□ 1.92
SSBP4-209ENST00000601357 FOXP2O15409 715 aa27.05■■□□□ 1.92
SSBP4-209ENST00000601357 ATP2B2Q01814 1243 aa27.05■■□□□ 1.92
SSBP4-209ENST00000601357 WDR78Q5VTH9 848 aa27.05■■□□□ 1.92
SSBP4-209ENST00000601357 SMC5Q8IY18 1101 aa27.05■■□□□ 1.92
SSBP4-209ENST00000601357 ANKLE1Q8NAG6 615 aa27.05■■□□□ 1.92
SSBP4-209ENST00000601357 EVI5LQ96CN4 794 aa27.05■■□□□ 1.92
SSBP4-209ENST00000601357 ATG4CQ96DT6 458 aa27.05■■□□□ 1.92
SSBP4-209ENST00000601357 NACAP1Q9BZK3 213 aa27.05■■□□□ 1.92
SSBP4-209ENST00000601357 GOPCQ9HD26 462 aa27.05■■□□□ 1.92
SSBP4-209ENST00000601357 NYAP2Q9P242 653 aa27.05■■□□□ 1.92
SSBP4-209ENST00000601357 H0YGN5 161 aa27.04■■□□□ 1.92
SSBP4-209ENST00000601357 ZNF287Q9HBT7 754 aa27.04■■□□□ 1.92
SSBP4-209ENST00000601357 FLRT1Q9NZU1 646 aa27.04■■□□□ 1.92
SSBP4-209ENST00000601357 IVNS1ABPQ9Y6Y0 642 aa27.04■■□□□ 1.92
SSBP4-209ENST00000601357 IGHA2P01877 340 aa27.03■■□□□ 1.92
SSBP4-209ENST00000601357 DPF3Q92784 378 aa27.03■■□□□ 1.92
SSBP4-209ENST00000601357 OGDHLQ9ULD0 1010 aa27.03■■□□□ 1.92
SSBP4-209ENST00000601357 MYH4Q9Y623 1939 aa27.03■■□□□ 1.92
SSBP4-209ENST00000601357 PLIN4Q96Q06 1357 aa27.02■■□□□ 1.92
SSBP4-209ENST00000601357 STRNO43815 780 aa27.02■■□□□ 1.92
SSBP4-209ENST00000601357 PRDM1O75626 825 aa27.02■■□□□ 1.92
SSBP4-209ENST00000601357 MNX1P50219 401 aaPredicted RBP27.02■■□□□ 1.92
SSBP4-209ENST00000601357 DIS3LQ8TF46 1054 aaKnown RBP27.02■■□□□ 1.92
SSBP4-209ENST00000601357 FBXO28Q9NVF7 368 aa27.02■■□□□ 1.92
SSBP4-209ENST00000601357 ALPK3Q96L96 1907 aa27.01■■□□□ 1.91
SSBP4-209ENST00000601357 ERCC3P19447 782 aa27.01■■□□□ 1.91
SSBP4-209ENST00000601357 TMEM132BQ14DG7 1078 aa27.01■■□□□ 1.91
SSBP4-209ENST00000601357 CCDC129Q6ZRS4 1044 aa27.01■■□□□ 1.91
SSBP4-209ENST00000601357 TICAM2Q86XR7 235 aa27.01■■□□□ 1.91
SSBP4-209ENST00000601357 ZNF444Q8N0Y2 327 aaPredicted RBP27.01■■□□□ 1.91
SSBP4-209ENST00000601357 EXOC6Q8TAG9 804 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms