RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 ACBD3Q9H3P7 528 aa6.67□□□□□ -1.34
VRK3-222ENST00000601324 KANK1Q14678 1352 aa6.67□□□□□ -1.34
VRK3-222ENST00000601324 ROBO2Q9HCK4 1378 aa6.67□□□□□ -1.34
VRK3-222ENST00000601324 NALCNQ8IZF0 1738 aa6.67□□□□□ -1.34
VRK3-222ENST00000601324 DISP2A7MBM2 1401 aa6.67□□□□□ -1.34
VRK3-222ENST00000601324 PRAG1Q86YV5 1406 aa6.67□□□□□ -1.34
VRK3-222ENST00000601324 PXDNQ92626 1479 aa6.66□□□□□ -1.34
VRK3-222ENST00000601324 CROCC2H7BZ55 1655 aa6.66□□□□□ -1.34
VRK3-222ENST00000601324 FAM221AA4D161 298 aa6.66□□□□□ -1.34
VRK3-222ENST00000601324 C1QTNF9BB2RNN3 333 aa6.66□□□□□ -1.34
VRK3-222ENST00000601324 CILPO75339 1184 aa6.66□□□□□ -1.34
VRK3-222ENST00000601324 GLB1P16278 677 aa6.66□□□□□ -1.34
VRK3-222ENST00000601324 ID3Q02535 119 aa6.66□□□□□ -1.34
VRK3-222ENST00000601324 RPL6Q02878 288 aaKnown RBP6.66□□□□□ -1.34
VRK3-222ENST00000601324 SOX4Q06945 474 aaPredicted RBP6.66□□□□□ -1.34
VRK3-222ENST00000601324 PAK2Q13177 524 aa6.66□□□□□ -1.34
VRK3-222ENST00000601324 ZC3H12AQ5D1E8 599 aaKnown RBP6.66□□□□□ -1.34
VRK3-222ENST00000601324 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.66□□□□□ -1.34
VRK3-222ENST00000601324 CD163Q86VB7 1156 aa6.66□□□□□ -1.34
VRK3-222ENST00000601324 MARF1Q9Y4F3 1742 aaKnown RBP6.65□□□□□ -1.34
VRK3-222ENST00000601324 TMPRSS2O15393 492 aa6.65□□□□□ -1.34
VRK3-222ENST00000601324 BPNT1O95861 308 aa6.65□□□□□ -1.34
VRK3-222ENST00000601324 ZC3H6P61129 1189 aaKnown RBP6.65□□□□□ -1.34
VRK3-222ENST00000601324 ERVK-24P63145 666 aa6.65□□□□□ -1.34
VRK3-222ENST00000601324 MPP2Q14168 576 aa6.65□□□□□ -1.34
VRK3-222ENST00000601324 HDXQ7Z353 690 aa6.65□□□□□ -1.34
VRK3-222ENST00000601324 UNC5CLQ8IV45 518 aa6.65□□□□□ -1.34
VRK3-222ENST00000601324 C12orf50Q8NA57 414 aaPredicted RBP6.65□□□□□ -1.34
VRK3-222ENST00000601324 EAF1Q96JC9 268 aaPredicted RBP6.65□□□□□ -1.34
VRK3-222ENST00000601324 LRRC3Q9BY71 257 aa6.65□□□□□ -1.34
VRK3-222ENST00000601324 CRIM1Q9NZV1 1036 aa6.65□□□□□ -1.34
VRK3-222ENST00000601324 PPP1R9AQ9ULJ8 1098 aa6.65□□□□□ -1.34
VRK3-222ENST00000601324 AP4E1Q9UPM8 1137 aa6.65□□□□□ -1.34
VRK3-222ENST00000601324 INPP5FQ9Y2H2 1132 aa6.65□□□□□ -1.34
VRK3-222ENST00000601324 SNCAIPQ9Y6H5 919 aa6.65□□□□□ -1.34
VRK3-222ENST00000601324 DAPK1P53355 1430 aa6.65□□□□□ -1.35
VRK3-222ENST00000601324 PTPN23Q9H3S7 1636 aa6.65□□□□□ -1.35
VRK3-222ENST00000601324 GDF11O95390 407 aa6.64□□□□□ -1.35
VRK3-222ENST00000601324 DRD2P14416 443 aa6.64□□□□□ -1.35
VRK3-222ENST00000601324 PREPP48147 710 aa6.64□□□□□ -1.35
VRK3-222ENST00000601324 GJA8P48165 433 aa6.64□□□□□ -1.35
VRK3-222ENST00000601324 TNNI2P48788 182 aa6.64□□□□□ -1.35
VRK3-222ENST00000601324 INPP5AQ14642 412 aa6.64□□□□□ -1.35
VRK3-222ENST00000601324 WIPI1Q5MNZ9 446 aaPredicted RBP6.64□□□□□ -1.35
VRK3-222ENST00000601324 LRFN4Q6PJG9 635 aa6.64□□□□□ -1.35
VRK3-222ENST00000601324 C2CD4AQ8NCU7 369 aaPredicted RBP6.64□□□□□ -1.35
VRK3-222ENST00000601324 ELMO3Q96BJ8 720 aa6.64□□□□□ -1.35
VRK3-222ENST00000601324 GPRASP2Q96D09 838 aa6.64□□□□□ -1.35
VRK3-222ENST00000601324 PLPPR2Q96GM1 343 aa6.64□□□□□ -1.35
VRK3-222ENST00000601324 FAM46AQ96IP4 442 aaKnown RBP6.64□□□□□ -1.35
VRK3-222ENST00000601324 ATXN3LQ9H3M9 355 aa6.64□□□□□ -1.35
VRK3-222ENST00000601324 UBP1Q9NZI7 540 aa6.64□□□□□ -1.35
VRK3-222ENST00000601324 DCDC2CA8MYV0 355 aa6.63□□□□□ -1.35
VRK3-222ENST00000601324 GFRA2O00451 464 aa6.63□□□□□ -1.35
VRK3-222ENST00000601324 SART1O43290 800 aaKnown RBP6.63□□□□□ -1.35
VRK3-222ENST00000601324 ADGRL2O95490 1459 aa6.63□□□□□ -1.35
VRK3-222ENST00000601324 CRKP46108 304 aa6.63□□□□□ -1.35
VRK3-222ENST00000601324 CDK8P49336 464 aa6.63□□□□□ -1.35
VRK3-222ENST00000601324 APOBRQ0VD83 1088 aa6.63□□□□□ -1.35
VRK3-222ENST00000601324 R3HDM1Q15032 1099 aaKnown RBP6.63□□□□□ -1.35
VRK3-222ENST00000601324 VPS72Q15906 364 aa6.63□□□□□ -1.35
VRK3-222ENST00000601324 CWF19L2Q2TBE0 894 aaKnown RBP6.63□□□□□ -1.35
VRK3-222ENST00000601324 UVSSAQ2YD98 709 aa6.63□□□□□ -1.35
VRK3-222ENST00000601324 REC114Q7Z4M0 266 aa6.63□□□□□ -1.35
VRK3-222ENST00000601324 DZIP1LQ8IYY4 767 aaKnown RBP6.63□□□□□ -1.35
VRK3-222ENST00000601324 TMEM151AQ8N4L1 468 aa6.63□□□□□ -1.35
VRK3-222ENST00000601324 FBXO27Q8NI29 283 aa6.63□□□□□ -1.35
VRK3-222ENST00000601324 RASGRP4Q8TDF6 673 aa6.63□□□□□ -1.35
VRK3-222ENST00000601324 MEGF10Q96KG7 1140 aa6.63□□□□□ -1.35
VRK3-222ENST00000601324 SPATA32Q96LK8 384 aa6.63□□□□□ -1.35
VRK3-222ENST00000601324 FANCD2OSQ96PS1 177 aa6.63□□□□□ -1.35
VRK3-222ENST00000601324 UBL7Q96S82 380 aaPredicted RBP6.63□□□□□ -1.35
VRK3-222ENST00000601324 TINF2Q9BSI4 451 aa6.63□□□□□ -1.35
VRK3-222ENST00000601324 GSX1Q9H4S2 264 aaPredicted RBP6.63□□□□□ -1.35
VRK3-222ENST00000601324 CAPN10Q9HC96 672 aa6.63□□□□□ -1.35
VRK3-222ENST00000601324 TACC3Q9Y6A5 838 aa6.63□□□□□ -1.35
VRK3-222ENST00000601324 TLR3O15455 904 aaKnown RBP6.62□□□□□ -1.35
VRK3-222ENST00000601324 GAS2O43903 313 aaKnown RBP6.62□□□□□ -1.35
VRK3-222ENST00000601324 RING1Q06587 406 aa6.62□□□□□ -1.35
VRK3-222ENST00000601324 GNL2Q13823 731 aaKnown RBP6.62□□□□□ -1.35
VRK3-222ENST00000601324 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.62□□□□□ -1.35
VRK3-222ENST00000601324 CYFIP1Q7L576 1253 aa6.62□□□□□ -1.35
VRK3-222ENST00000601324 DYMQ7RTS9 669 aa6.62□□□□□ -1.35
VRK3-222ENST00000601324 KRT27Q7Z3Y8 459 aa6.62□□□□□ -1.35
VRK3-222ENST00000601324 SLITRK4Q8IW52 837 aa6.62□□□□□ -1.35
VRK3-222ENST00000601324 DISC1Q9NRI5 854 aa6.62□□□□□ -1.35
VRK3-222ENST00000601324 HIF3AQ9Y2N7 669 aa6.62□□□□□ -1.35
VRK3-222ENST00000601324 CSADQ9Y600 493 aa6.62□□□□□ -1.35
VRK3-222ENST00000601324 ACTL7BQ9Y614 415 aa6.62□□□□□ -1.35
VRK3-222ENST00000601324 ANKRD30AQ9BXX3 1397 aa6.61□□□□□ -1.35
VRK3-222ENST00000601324 GATA4P43694 442 aa6.61□□□□□ -1.35
VRK3-222ENST00000601324 ASPAP45381 313 aa6.61□□□□□ -1.35
VRK3-222ENST00000601324 PLA2G4EQ3MJ16 856 aa6.61□□□□□ -1.35
VRK3-222ENST00000601324 SEZ6Q53EL9 994 aa6.61□□□□□ -1.35
VRK3-222ENST00000601324 NAALADL2Q58DX5 795 aa6.61□□□□□ -1.35
VRK3-222ENST00000601324 PPM1JQ5JR12 505 aa6.61□□□□□ -1.35
VRK3-222ENST00000601324 C12orf40Q86WS4 652 aa6.61□□□□□ -1.35
VRK3-222ENST00000601324 RNF214Q8ND24 703 aa6.61□□□□□ -1.35
VRK3-222ENST00000601324 NKD1Q969G9 470 aa6.61□□□□□ -1.35
VRK3-222ENST00000601324 CAMKK2Q96RR4 588 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms