RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 CATIPQ7Z7H3 387 aa23.95■■□□□ 1.42
PNKP-215ENST00000600910 ZNF654Q8IZM8 581 aa23.95■■□□□ 1.42
PNKP-215ENST00000600910 FEZ1Q99689 392 aa23.95■■□□□ 1.42
PNKP-215ENST00000600910 MYL10Q9BUA6 226 aa23.95■■□□□ 1.42
PNKP-215ENST00000600910 SH2D4AQ9H788 454 aa23.95■■□□□ 1.42
PNKP-215ENST00000600910 TLL2Q9Y6L7 1015 aa23.95■■□□□ 1.42
PNKP-215ENST00000600910 USP17L10C9JJH3 530 aa23.94■■□□□ 1.42
PNKP-215ENST00000600910 ZYXQ15942 572 aaKnown RBP23.94■■□□□ 1.42
PNKP-215ENST00000600910 SYNPO2Q9UMS6 1093 aa23.94■■□□□ 1.42
PNKP-215ENST00000600910 LIMCH1Q9UPQ0 1083 aa23.94■■□□□ 1.42
PNKP-215ENST00000600910 MTMR7Q9Y216 660 aa23.94■■□□□ 1.42
PNKP-215ENST00000600910 RAD21O60216 631 aa23.93■■□□□ 1.42
PNKP-215ENST00000600910 MTMR2Q13614 643 aa23.93■■□□□ 1.42
PNKP-215ENST00000600910 SYNE3Q6ZMZ3 975 aa23.93■■□□□ 1.42
PNKP-215ENST00000600910 RAB11FIP4Q86YS3 637 aa23.93■■□□□ 1.42
PNKP-215ENST00000600910 KIAA1683Q9H0B3 1180 aa23.93■■□□□ 1.42
PNKP-215ENST00000600910 ABT1Q9ULW3 272 aaKnown RBP23.93■■□□□ 1.42
PNKP-215ENST00000600910 IRF6O14896 467 aa23.92■■□□□ 1.42
PNKP-215ENST00000600910 RXRAP19793 462 aa23.92■■□□□ 1.42
PNKP-215ENST00000600910 MCM2P49736 904 aa23.92■■□□□ 1.42
PNKP-215ENST00000600910 BACE1P56817 501 aa23.92■■□□□ 1.42
PNKP-215ENST00000600910 TROAPQ12815 778 aa23.92■■□□□ 1.42
PNKP-215ENST00000600910 PPIL2Q13356 520 aa23.92■■□□□ 1.42
PNKP-215ENST00000600910 MICU3Q86XE3 530 aa23.92■■□□□ 1.42
PNKP-215ENST00000600910 SNX21Q969T3 373 aa23.92■■□□□ 1.42
PNKP-215ENST00000600910 CHMP4CQ96CF2 233 aa23.92■■□□□ 1.42
PNKP-215ENST00000600910 RBM19Q9Y4C8 960 aaKnown RBP23.92■■□□□ 1.42
PNKP-215ENST00000600910 GOLGA8BA8MQT2 603 aa23.92■■□□□ 1.42
PNKP-215ENST00000600910 F5H6K3 240 aa23.92■■□□□ 1.42
PNKP-215ENST00000600910 ZBTB43O43298 467 aa23.92■■□□□ 1.42
PNKP-215ENST00000600910 DDAH1O94760 285 aa23.92■■□□□ 1.42
PNKP-215ENST00000600910 PDIA3P30101 505 aaKnown RBP23.92■■□□□ 1.42
PNKP-215ENST00000600910 GJA5P36382 358 aa23.92■■□□□ 1.42
PNKP-215ENST00000600910 KLRC3Q07444 240 aa23.92■■□□□ 1.42
PNKP-215ENST00000600910 RASGRP2Q7LDG7 609 aa23.92■■□□□ 1.42
PNKP-215ENST00000600910 GMCL1P1Q8NEA9 526 aa23.92■■□□□ 1.42
PNKP-215ENST00000600910 NUP133Q8WUM0 1156 aa23.92■■□□□ 1.42
PNKP-215ENST00000600910 ZNF274Q96GC6 653 aaPredicted RBP23.92■■□□□ 1.42
PNKP-215ENST00000600910 GOPCQ9HD26 462 aa23.92■■□□□ 1.42
PNKP-215ENST00000600910 LARGE1O95461 756 aa23.91■■□□□ 1.42
PNKP-215ENST00000600910 APLP1P51693 650 aa23.91■■□□□ 1.42
PNKP-215ENST00000600910 ME3Q16798 604 aa23.91■■□□□ 1.42
PNKP-215ENST00000600910 WNK4Q96J92 1243 aa23.91■■□□□ 1.42
PNKP-215ENST00000600910 VCPKMTQ9H867 229 aa23.91■■□□□ 1.42
PNKP-215ENST00000600910 ZNF157P51786 506 aaPredicted RBP23.9■■□□□ 1.42
PNKP-215ENST00000600910 STK3Q13188 491 aa23.9■■□□□ 1.42
PNKP-215ENST00000600910 DGKZQ13574 1117 aa23.9■■□□□ 1.42
PNKP-215ENST00000600910 KIAA1755Q5JYT7 1200 aa23.9■■□□□ 1.42
PNKP-215ENST00000600910 SLFN13Q68D06 897 aa23.9■■□□□ 1.42
PNKP-215ENST00000600910 RGMBQ6NW40 437 aa23.9■■□□□ 1.42
PNKP-215ENST00000600910 CCDC144CPQ8IYA2 1237 aa23.9■■□□□ 1.42
PNKP-215ENST00000600910 SPICE1Q8N0Z3 855 aa23.9■■□□□ 1.42
PNKP-215ENST00000600910 HPS5Q9UPZ3 1129 aa23.9■■□□□ 1.42
PNKP-215ENST00000600910 C19orf81C9J6K1 198 aa23.89■■□□□ 1.42
PNKP-215ENST00000600910 NDUFB10O96000 172 aa23.89■■□□□ 1.42
PNKP-215ENST00000600910 CALM1P0DP23 149 aa23.89■■□□□ 1.42
PNKP-215ENST00000600910 CALM2P0DP24 149 aa23.89■■□□□ 1.42
PNKP-215ENST00000600910 CALM3P0DP25 149 aa23.89■■□□□ 1.42
PNKP-215ENST00000600910 PDHBP11177 359 aa23.89■■□□□ 1.42
PNKP-215ENST00000600910 USP14P54578 494 aa23.89■■□□□ 1.42
PNKP-215ENST00000600910 KCNH4Q9UQ05 1017 aa23.89■■□□□ 1.42
PNKP-215ENST00000600910 METAP2P50579 478 aaKnown RBP eCLIP23.88■■□□□ 1.41
PNKP-215ENST00000600910 RCAN1P53805 252 aa23.88■■□□□ 1.41
PNKP-215ENST00000600910 HMGCS2P54868 508 aa23.88■■□□□ 1.41
PNKP-215ENST00000600910 HSCBQ8IWL3 235 aa23.88■■□□□ 1.41
PNKP-215ENST00000600910 ZSCAN31Q96LW9 406 aaPredicted RBP23.88■■□□□ 1.41
PNKP-215ENST00000600910 SLKQ9H2G2 1235 aaPredicted RBP23.88■■□□□ 1.41
PNKP-215ENST00000600910 EMILIN3Q9NT22 766 aa23.88■■□□□ 1.41
PNKP-215ENST00000600910 GOLGA8AA7E2F4 631 aa23.88■■□□□ 1.41
PNKP-215ENST00000600910 CXCL11O14625 94 aa23.88■■□□□ 1.41
PNKP-215ENST00000600910 SNHG28P0DPA3 235 aa23.88■■□□□ 1.41
PNKP-215ENST00000600910 CCT2P78371 535 aaKnown RBP23.88■■□□□ 1.41
PNKP-215ENST00000600910 MKRN3Q13064 507 aaKnown RBP23.88■■□□□ 1.41
PNKP-215ENST00000600910 SPRYD7Q5W111 196 aa23.88■■□□□ 1.41
PNKP-215ENST00000600910 USP17L2Q6R6M4 530 aa23.88■■□□□ 1.41
PNKP-215ENST00000600910 RASAL3Q86YV0 1011 aa23.88■■□□□ 1.41
PNKP-215ENST00000600910 FANCBQ8NB91 859 aa23.88■■□□□ 1.41
PNKP-215ENST00000600910 TMX3Q96JJ7 454 aa23.88■■□□□ 1.41
PNKP-215ENST00000600910 CREBZFQ9NS37 354 aa23.88■■□□□ 1.41
PNKP-215ENST00000600910 PTPRFP10586 1907 aa23.87■■□□□ 1.41
PNKP-215ENST00000600910 K7ELQ4 463 aaPredicted RBP23.87■■□□□ 1.41
PNKP-215ENST00000600910 PFKFB2O60825 505 aa23.87■■□□□ 1.41
PNKP-215ENST00000600910 ZBTB48P10074 688 aaPredicted RBP23.87■■□□□ 1.41
PNKP-215ENST00000600910 SLC1A4P43007 532 aa23.87■■□□□ 1.41
PNKP-215ENST00000600910 GRM4Q14833 912 aa23.87■■□□□ 1.41
PNKP-215ENST00000600910 SH3D19Q5HYK7 790 aa23.87■■□□□ 1.41
PNKP-215ENST00000600910 CTCFLQ8NI51 663 aaPredicted RBP23.87■■□□□ 1.41
PNKP-215ENST00000600910 DCAF4Q8WV16 495 aa23.87■■□□□ 1.41
PNKP-215ENST00000600910 LPAR1Q92633 364 aa23.87■■□□□ 1.41
PNKP-215ENST00000600910 GMCL1Q96IK5 515 aa23.87■■□□□ 1.41
PNKP-215ENST00000600910 HHIPL1Q96JK4 782 aa23.87■■□□□ 1.41
PNKP-215ENST00000600910 MAP3K14Q99558 947 aa23.87■■□□□ 1.41
PNKP-215ENST00000600910 SH2B1Q9NRF2 756 aaPredicted RBP23.87■■□□□ 1.41
PNKP-215ENST00000600910 A0A0G2JLL6 359 aaPredicted RBP23.86■■□□□ 1.41
PNKP-215ENST00000600910 ANP32AP39687 249 aaKnown RBP23.86■■□□□ 1.41
PNKP-215ENST00000600910 PRRT2Q7Z6L0 340 aaPredicted RBP23.86■■□□□ 1.41
PNKP-215ENST00000600910 NECAB1Q8N987 351 aa23.86■■□□□ 1.41
PNKP-215ENST00000600910 NUP88Q99567 741 aaPredicted RBP23.86■■□□□ 1.41
PNKP-215ENST00000600910 NCOA5Q9HCD5 579 aaKnown RBP23.86■■□□□ 1.41
PNKP-215ENST00000600910 TMOD4Q9NZQ9 345 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms