RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 COL6A1P12109 1028 aa12.36□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 ITGB8P26012 769 aa12.36□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 KCTD2Q14681 263 aa12.36□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 ERMP1Q7Z2K6 904 aa12.36□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 MIGA1Q8NAN2 632 aa12.36□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 ZNF512BQ96KM6 892 aaPredicted RBP12.36□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 TBC1D2Q9BYX2 928 aa12.36□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 DHX36Q9H2U1 1008 aaKnown RBP12.36□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 ZNF576Q9H609 170 aa12.36□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 AS3MTQ9HBK9 375 aa12.36□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 OGDHLQ9ULD0 1010 aa12.36□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 MYH7P12883 1935 aa12.36□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 COL11A1P12107 1806 aaPredicted RBP12.36□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 MAP1BP46821 2468 aaKnown RBP12.35□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 ZNF236Q9UL36 1845 aa12.35□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 IPO8O15397 1037 aaKnown RBP12.35□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 ASNSP08243 561 aa12.35□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 DNAJB2P25686 324 aa12.35□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 CCND3P30281 292 aaPredicted RBP12.35□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 GUCY1A2P33402 732 aa12.35□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 IRX3P78415 501 aaPredicted RBP12.35□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 AAK1Q2M2I8 961 aa12.35□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 ZKSCAN2Q63HK3 967 aa12.35□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 UIMC1Q96RL1 719 aa12.35□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 PRRC2BQ5JSZ5 2229 aaKnown RBP12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 USP17L10C9JJH3 530 aa12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 BAG3O95817 575 aa12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 GH2P01242 217 aa12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 PRKAR2AP13861 404 aaKnown RBP12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 CYP7A1P22680 504 aa12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 ERVK-9P63128 1117 aa12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 ERVK-24P63145 666 aa12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 CACNB2Q08289 660 aaPredicted RBP12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 PABPC4Q13310 644 aaKnown RBP eCLIP12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 ZYXQ15942 572 aaKnown RBP12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 CCDC158Q5M9N0 1113 aa12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 MORN1Q5T089 497 aa12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 TATDN1Q6P1N9 297 aa12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 CEP85Q6P2H3 762 aa12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 GPR142Q7Z601 462 aa12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 FOXP4Q8IVH2 680 aaPredicted RBP12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 ACER1Q8TDN7 264 aa12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 RIOK1Q9BRS2 568 aaKnown RBP12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 HMX1Q9NP08 348 aaPredicted RBP12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 FLRT1Q9NZU1 646 aa12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 ZNFX1Q9P2E3 1918 aaKnown RBP12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 GPR179Q6PRD1 2367 aa12.34□□□□□ -0.43
MIA-RAB4B-201ENST00000600729 DMXL1Q9Y485 3027 aa12.33□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 IDH1O75874 414 aaKnown RBP12.33□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 PLCG2P16885 1265 aa12.33□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 SHMT1P34896 483 aa12.33□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 PLCD1P51178 756 aa12.33□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 OS9Q13438 667 aaPredicted RBP12.33□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 LHX8Q68G74 356 aa12.33□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 CRACR2BQ8N4Y2 399 aaPredicted RBP12.33□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 MAGEB6Q8N7X4 407 aa12.33□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 C12orf42Q96LP6 360 aa12.33□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 PAGR1Q9BTK6 254 aa12.33□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 TSPYL2Q9H2G4 693 aaPredicted RBP12.33□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 PRDM12Q9H4Q4 367 aa12.33□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 TMOD4Q9NZQ9 345 aa12.33□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 EXOC6BQ9Y2D4 811 aa12.33□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 VPS13AQ96RL7 3174 aa12.32□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 FAM208BQ5VWN6 2430 aa12.32□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 GBF1Q92538 1859 aa12.32□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 C19orf81C9J6K1 198 aa12.32□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 XRCC5P13010 732 aaKnown RBP12.32□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 HNRNPUQ00839 825 aaKnown RBP eCLIP12.32□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 ADGRE1Q14246 886 aa12.32□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 SLFNL1Q499Z3 407 aa12.32□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 GPRC5AQ8NFJ5 357 aa12.32□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 NUDT12Q9BQG2 462 aa12.32□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 NOL10Q9BSC4 688 aaKnown RBP12.32□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 BTBD7Q9P203 1132 aa12.32□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 GVINP1Q7Z2Y8 2422 aa12.31□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 GREB1LQ9C091 1923 aaPredicted RBP12.31□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 IGHA2P01877 340 aa12.31□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 CHGBP05060 677 aa12.31□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 VCAM1P19320 739 aa12.31□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 GABPAQ06546 454 aa12.31□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 KIAA1755Q5JYT7 1200 aa12.31□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 USP17L2Q6R6M4 530 aa12.31□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 ITPRIPQ8IWB1 547 aa12.31□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 PANK1Q8TE04 598 aa12.31□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 SOCS4Q8WXH5 440 aa12.31□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 PRKAG2Q9UGJ0 569 aa12.31□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 A0A1W2PRG0 241 aa12.3□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 SPDYE16A6NNV3 312 aaPredicted RBP12.3□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 CATSPERGQ6ZRH7 1159 aa12.3□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 PLEKHH3Q7Z736 793 aa12.3□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 CLEC10AQ8IUN9 316 aa12.3□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 TRPV1Q8NER1 839 aa12.3□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 NPLOC4Q8TAT6 608 aa12.3□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 EDC3Q96F86 508 aaKnown RBP12.3□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 APBA2Q99767 749 aa12.3□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 EHD4Q9H223 541 aa12.3□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 IL1RAPL2Q9NP60 686 aa12.3□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 GINM1Q9NU53 330 aa12.3□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 SERPINB13Q9UIV8 391 aa12.3□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 SMCHD1A6NHR9 2005 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms