RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 IFNL3Q8IZI9 196 aa18.69■□□□□ 0.58
IRF3-226ENST00000600453 MB21D1Q8N884 522 aa18.69■□□□□ 0.58
IRF3-226ENST00000600453 TANGO6Q9C0B7 1094 aa18.69■□□□□ 0.58
IRF3-226ENST00000600453 VCPKMTQ9H867 229 aa18.69■□□□□ 0.58
IRF3-226ENST00000600453 GOPCQ9HD26 462 aa18.69■□□□□ 0.58
IRF3-226ENST00000600453 SALL3Q9BXA9 1300 aa18.69■□□□□ 0.58
IRF3-226ENST00000600453 CENPFP49454 3210 aa18.68■□□□□ 0.58
IRF3-226ENST00000600453 M0R2C6 588 aa18.68■□□□□ 0.58
IRF3-226ENST00000600453 SGPL1O95470 568 aa18.68■□□□□ 0.58
IRF3-226ENST00000600453 GPR142Q7Z601 462 aa18.68■□□□□ 0.58
IRF3-226ENST00000600453 SIAH1Q8IUQ4 282 aa18.68■□□□□ 0.58
IRF3-226ENST00000600453 SMC5Q8IY18 1101 aa18.68■□□□□ 0.58
IRF3-226ENST00000600453 U2AF1L4Q8WU68 220 aaKnown RBP18.68■□□□□ 0.58
IRF3-226ENST00000600453 UNC93B1Q9H1C4 597 aa18.68■□□□□ 0.58
IRF3-226ENST00000600453 IVNS1ABPQ9Y6Y0 642 aa18.68■□□□□ 0.58
IRF3-226ENST00000600453 TNRC18O15417 2968 aaPredicted RBP18.68■□□□□ 0.58
IRF3-226ENST00000600453 WDR46O15213 610 aaKnown RBP18.67■□□□□ 0.58
IRF3-226ENST00000600453 EEF2P13639 858 aaKnown RBP18.67■□□□□ 0.58
IRF3-226ENST00000600453 CYP2B6P20813 491 aa18.67■□□□□ 0.58
IRF3-226ENST00000600453 RGS2P41220 211 aa18.67■□□□□ 0.58
IRF3-226ENST00000600453 ATP2B2Q01814 1243 aa18.67■□□□□ 0.58
IRF3-226ENST00000600453 PDE4BQ07343 736 aa18.67■□□□□ 0.58
IRF3-226ENST00000600453 NAPBQ9H115 298 aa18.67■□□□□ 0.58
IRF3-226ENST00000600453 HMX1Q9NP08 348 aaPredicted RBP18.67■□□□□ 0.58
IRF3-226ENST00000600453 RPTORQ8N122 1335 aa18.67■□□□□ 0.58
IRF3-226ENST00000600453 SPDYE16A6NNV3 312 aaPredicted RBP18.66■□□□□ 0.58
IRF3-226ENST00000600453 TFRCP02786 760 aaKnown RBP18.66■□□□□ 0.58
IRF3-226ENST00000600453 DSG3P32926 999 aa18.66■□□□□ 0.58
IRF3-226ENST00000600453 PORCNQ9H237 461 aa18.66■□□□□ 0.58
IRF3-226ENST00000600453 HELLSQ9NRZ9 838 aa18.66■□□□□ 0.58
IRF3-226ENST00000600453 SLC15A5A6NIM6 579 aa18.65■□□□□ 0.58
IRF3-226ENST00000600453 SMIM22K7EJ46 135 aa18.65■□□□□ 0.58
IRF3-226ENST00000600453 STRNO43815 780 aa18.65■□□□□ 0.58
IRF3-226ENST00000600453 CNMDO75829 334 aa18.65■□□□□ 0.58
IRF3-226ENST00000600453 FLOT1O75955 427 aa18.65■□□□□ 0.58
IRF3-226ENST00000600453 RASA1P20936 1047 aa18.65■□□□□ 0.58
IRF3-226ENST00000600453 MORN1Q5T089 497 aa18.65■□□□□ 0.58
IRF3-226ENST00000600453 WDR78Q5VTH9 848 aa18.65■□□□□ 0.58
IRF3-226ENST00000600453 POTEEQ6S8J3 1075 aa18.65■□□□□ 0.58
IRF3-226ENST00000600453 USP6NLQ92738 828 aa18.65■□□□□ 0.58
IRF3-226ENST00000600453 SEC62Q99442 399 aaKnown RBP18.65■□□□□ 0.58
IRF3-226ENST00000600453 HTATIP2Q9BUP3 242 aa18.65■□□□□ 0.58
IRF3-226ENST00000600453 PAK6Q9NQU5 681 aaPredicted RBP18.65■□□□□ 0.58
IRF3-226ENST00000600453 NYAP2Q9P242 653 aa18.65■□□□□ 0.58
IRF3-226ENST00000600453 ROBO3Q96MS0 1386 aa18.65■□□□□ 0.58
IRF3-226ENST00000600453 PEX10O60683 326 aa18.64■□□□□ 0.57
IRF3-226ENST00000600453 PTPREP23469 700 aa18.64■□□□□ 0.57
IRF3-226ENST00000600453 MAP2K5Q13163 448 aa18.64■□□□□ 0.57
IRF3-226ENST00000600453 PPP4R3BQ5MIZ7 849 aa18.64■□□□□ 0.57
IRF3-226ENST00000600453 B4GALNT3Q6L9W6 998 aa18.64■□□□□ 0.57
IRF3-226ENST00000600453 CHD1LQ86WJ1 897 aa18.64■□□□□ 0.57
IRF3-226ENST00000600453 SPICE1Q8N0Z3 855 aa18.64■□□□□ 0.57
IRF3-226ENST00000600453 SHCBP1Q8NEM2 672 aa18.64■□□□□ 0.57
IRF3-226ENST00000600453 EXOC6Q8TAG9 804 aa18.64■□□□□ 0.57
IRF3-226ENST00000600453 DEFB118Q96PH6 123 aa18.64■□□□□ 0.57
IRF3-226ENST00000600453 LNPKQ9C0E8 428 aa18.64■□□□□ 0.57
IRF3-226ENST00000600453 EPB41L4AQ9HCS5 686 aaPredicted RBP18.64■□□□□ 0.57
IRF3-226ENST00000600453 BTBD7Q9P203 1132 aa18.64■□□□□ 0.57
IRF3-226ENST00000600453 SUPT16HQ9Y5B9 1047 aaKnown RBP18.64■□□□□ 0.57
IRF3-226ENST00000600453 ZKSCAN1P17029 563 aaPredicted RBP18.63■□□□□ 0.57
IRF3-226ENST00000600453 STK11IPQ8N1F8 1099 aa18.63■□□□□ 0.57
IRF3-226ENST00000600453 SHISA4Q96DD7 197 aa18.63■□□□□ 0.57
IRF3-226ENST00000600453 APBA2Q99767 749 aa18.63■□□□□ 0.57
IRF3-226ENST00000600453 SPATC1LQ9H0A9 340 aa18.63■□□□□ 0.57
IRF3-226ENST00000600453 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.63■□□□□ 0.573e-11■■■□□ 15.6
IRF3-226ENST00000600453 SLC5A4Q9NY91 659 aa18.63■□□□□ 0.57
IRF3-226ENST00000600453 SYNPO2Q9UMS6 1093 aa18.63■□□□□ 0.57
IRF3-226ENST00000600453 TRIM6-TRIM34B2RNG4 842 aa18.62■□□□□ 0.57
IRF3-226ENST00000600453 RAD21O60216 631 aa18.62■□□□□ 0.57
IRF3-226ENST00000600453 NUCB1Q02818 461 aa18.62■□□□□ 0.57
IRF3-226ENST00000600453 PPARAQ07869 468 aa18.62■□□□□ 0.57
IRF3-226ENST00000600453 KIAA1755Q5JYT7 1200 aa18.62■□□□□ 0.57
IRF3-226ENST00000600453 CLEC10AQ8IUN9 316 aa18.62■□□□□ 0.57
IRF3-226ENST00000600453 ANKLE1Q8NAG6 615 aa18.62■□□□□ 0.57
IRF3-226ENST00000600453 TRIB2Q92519 343 aa18.62■□□□□ 0.57
IRF3-226ENST00000600453 MKL1Q969V6 931 aa18.62■□□□□ 0.57
IRF3-226ENST00000600453 MROH8Q9H579 483 aa18.62■□□□□ 0.57
IRF3-226ENST00000600453 FARP2O94887 1054 aaPredicted RBP18.61■□□□□ 0.57
IRF3-226ENST00000600453 SLC25A27O95847 323 aa18.61■□□□□ 0.57
IRF3-226ENST00000600453 IGHDP01880 384 aa18.61■□□□□ 0.57
IRF3-226ENST00000600453 TSPY3P0CV98 308 aa18.61■□□□□ 0.57
IRF3-226ENST00000600453 TSPY8P0CW00 308 aa18.61■□□□□ 0.57
IRF3-226ENST00000600453 MCMDC2Q4G0Z9 681 aa18.61■□□□□ 0.57
IRF3-226ENST00000600453 MFSD14CQ5VZR4 134 aa18.61■□□□□ 0.57
IRF3-226ENST00000600453 DPF3Q92784 378 aa18.61■□□□□ 0.57
IRF3-226ENST00000600453 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.61■□□□□ 0.57
IRF3-226ENST00000600453 MOV10L1Q9BXT6 1211 aaKnown RBP18.61■□□□□ 0.57
IRF3-226ENST00000600453 CRISPLD2Q9H0B8 497 aa18.61■□□□□ 0.57
IRF3-226ENST00000600453 OSBPL3Q9H4L5 887 aa18.61■□□□□ 0.57
IRF3-226ENST00000600453 CLIP2Q9UDT6 1046 aa18.61■□□□□ 0.57
IRF3-226ENST00000600453 F5H6K3 240 aa18.6■□□□□ 0.57
IRF3-226ENST00000600453 TTLL1O95922 423 aa18.6■□□□□ 0.57
IRF3-226ENST00000600453 HOXC6P09630 235 aa18.6■□□□□ 0.57
IRF3-226ENST00000600453 MFAP1P55081 439 aaKnown RBP18.6■□□□□ 0.57
IRF3-226ENST00000600453 KLRC3Q07444 240 aa18.6■□□□□ 0.57
IRF3-226ENST00000600453 GRB14Q14449 540 aa18.6■□□□□ 0.57
IRF3-226ENST00000600453 PLS1Q14651 629 aa18.6■□□□□ 0.57
IRF3-226ENST00000600453 ALX1Q15699 326 aa18.6■□□□□ 0.57
IRF3-226ENST00000600453 MAP3K21Q5TCX8 1036 aa18.6■□□□□ 0.57
IRF3-226ENST00000600453 DPP9Q86TI2 863 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms