RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 COL9A3Q14050 684 aaPredicted RBP10.97□□□□□ -0.65
NFKB1-212ENST00000600343 TOB2Q14106 344 aaPredicted RBP10.97□□□□□ -0.65
NFKB1-212ENST00000600343 STK38Q15208 465 aa10.97□□□□□ -0.65
NFKB1-212ENST00000600343 QPCTQ16769 361 aa10.97□□□□□ -0.65
NFKB1-212ENST00000600343 ARPC5LQ9BPX5 153 aa10.97□□□□□ -0.65
NFKB1-212ENST00000600343 NDST4Q9H3R1 872 aa10.97□□□□□ -0.65
NFKB1-212ENST00000600343 C19orf44Q9H6X5 657 aa10.97□□□□□ -0.65
NFKB1-212ENST00000600343 E2F6O75461 281 aa10.97□□□□□ -0.65
NFKB1-212ENST00000600343 CAPN15O75808 1086 aa10.97□□□□□ -0.65
NFKB1-212ENST00000600343 MBD4O95243 580 aa10.97□□□□□ -0.65
NFKB1-212ENST00000600343 VIMP08670 466 aaKnown RBP10.97□□□□□ -0.65
NFKB1-212ENST00000600343 EPHB4P54760 987 aa10.97□□□□□ -0.65
NFKB1-212ENST00000600343 PRPF4BQ13523 1007 aaKnown RBP10.97□□□□□ -0.65
NFKB1-212ENST00000600343 AFAP1Q8N556 730 aa10.97□□□□□ -0.65
NFKB1-212ENST00000600343 CCDC155Q8N6L0 562 aa10.97□□□□□ -0.65
NFKB1-212ENST00000600343 CCT6BQ92526 530 aa10.97□□□□□ -0.65
NFKB1-212ENST00000600343 NUB1Q9Y5A7 615 aa10.97□□□□□ -0.65
NFKB1-212ENST00000600343 COL3A1P02461 1466 aaPredicted RBP10.97□□□□□ -0.65
NFKB1-212ENST00000600343 PNMA6EA0A0J9YXQ4 647 aa10.96□□□□□ -0.65
NFKB1-212ENST00000600343 PPIP5K2O43314 1243 aa10.96□□□□□ -0.65
NFKB1-212ENST00000600343 RPS6KB1P23443 525 aa10.96□□□□□ -0.65
NFKB1-212ENST00000600343 RPL13P26373 211 aaKnown RBP10.96□□□□□ -0.65
NFKB1-212ENST00000600343 HPDP32754 393 aaPredicted RBP10.96□□□□□ -0.65
NFKB1-212ENST00000600343 PPP4R3AQ6IN85 833 aa10.96□□□□□ -0.65
NFKB1-212ENST00000600343 IQCEQ6IPM2 695 aa10.96□□□□□ -0.65
NFKB1-212ENST00000600343 ATXN10Q9UBB4 475 aa10.96□□□□□ -0.65
NFKB1-212ENST00000600343 TUBP50607 506 aa10.96□□□□□ -0.65
NFKB1-212ENST00000600343 INHBCP55103 352 aa10.96□□□□□ -0.65
NFKB1-212ENST00000600343 ADAM9Q13443 819 aa10.96□□□□□ -0.65
NFKB1-212ENST00000600343 CFAP58Q5T655 872 aa10.96□□□□□ -0.65
NFKB1-212ENST00000600343 GKAP1Q5VSY0 366 aaPredicted RBP10.96□□□□□ -0.65
NFKB1-212ENST00000600343 NAA16Q6N069 864 aaPredicted RBP10.96□□□□□ -0.65
NFKB1-212ENST00000600343 DPY19L2Q6NUT2 758 aa10.96□□□□□ -0.65
NFKB1-212ENST00000600343 PI4K2BQ8TCG2 481 aa10.96□□□□□ -0.65
NFKB1-212ENST00000600343 IQGAP2Q13576 1575 aa10.96□□□□□ -0.65
NFKB1-212ENST00000600343 TDRD9Q8NDG6 1382 aaKnown RBP10.96□□□□□ -0.66
NFKB1-212ENST00000600343 C2orf54Q08AI8 447 aa10.96□□□□□ -0.66
NFKB1-212ENST00000600343 GUCA1BQ9UMX6 200 aa10.96□□□□□ -0.66
NFKB1-212ENST00000600343 ABCC3O15438 1527 aa10.96□□□□□ -0.66
NFKB1-212ENST00000600343 SPHKAPQ2M3C7 1700 aa10.96□□□□□ -0.66
NFKB1-212ENST00000600343 CHD2O14647 1828 aaKnown RBP10.95□□□□□ -0.66
NFKB1-212ENST00000600343 ABLIM1O14639 778 aa10.95□□□□□ -0.66
NFKB1-212ENST00000600343 PPARDQ03181 441 aa10.95□□□□□ -0.66
NFKB1-212ENST00000600343 CUL4BQ13620 913 aa10.95□□□□□ -0.66
NFKB1-212ENST00000600343 GLE1Q53GS7 698 aaKnown RBP10.95□□□□□ -0.66
NFKB1-212ENST00000600343 FKBP15Q5T1M5 1219 aa10.95□□□□□ -0.66
NFKB1-212ENST00000600343 EMC10Q5UCC4 262 aa10.95□□□□□ -0.66
NFKB1-212ENST00000600343 EMBQ6PCB8 327 aa10.95□□□□□ -0.66
NFKB1-212ENST00000600343 MAEAQ7L5Y9 396 aa10.95□□□□□ -0.66
NFKB1-212ENST00000600343 ARFGAP2Q8N6H7 521 aa10.95□□□□□ -0.66
NFKB1-212ENST00000600343 FANCD2Q9BXW9 1451 aa10.95□□□□□ -0.66
NFKB1-212ENST00000600343 URB2Q14146 1524 aaKnown RBP10.95□□□□□ -0.66
NFKB1-212ENST00000600343 CFAP73A6NFT4 308 aa10.95□□□□□ -0.66
NFKB1-212ENST00000600343 ATP2A2P16615 1042 aaKnown RBP10.95□□□□□ -0.66
NFKB1-212ENST00000600343 RBL2Q08999 1139 aa10.95□□□□□ -0.66
NFKB1-212ENST00000600343 LONRF3Q496Y0 759 aa10.95□□□□□ -0.66
NFKB1-212ENST00000600343 ERICH1Q86X53 443 aa10.95□□□□□ -0.66
NFKB1-212ENST00000600343 FGD4Q96M96 766 aa10.95□□□□□ -0.66
NFKB1-212ENST00000600343 OCEL1Q9H607 264 aa10.95□□□□□ -0.66
NFKB1-212ENST00000600343 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.95□□□□□ -0.66
NFKB1-212ENST00000600343 BZW2Q9Y6E2 419 aaKnown RBP10.95□□□□□ -0.66
NFKB1-212ENST00000600343 ATP1A1P05023 1023 aaKnown RBP10.95□□□□□ -0.66
NFKB1-212ENST00000600343 CDC37Q16543 378 aaPredicted RBP10.95□□□□□ -0.66
NFKB1-212ENST00000600343 CEP131Q9UPN4 1083 aa10.95□□□□□ -0.66
NFKB1-212ENST00000600343 KDM6AO15550 1401 aaPredicted RBP10.95□□□□□ -0.66
NFKB1-212ENST00000600343 UNC13BO14795 1591 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 PDHA1P08559 390 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 VIL1P09327 827 aaKnown RBP10.94□□□□□ -0.66
NFKB1-212ENST00000600343 PCK1P35558 622 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 POLA2Q14181 598 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 MYBPC2Q14324 1141 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 LBRQ14739 615 aaKnown RBP10.94□□□□□ -0.66
NFKB1-212ENST00000600343 PABPC1LQ4VXU2 614 aaKnown RBP10.94□□□□□ -0.66
NFKB1-212ENST00000600343 ANO7Q6IWH7 933 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 AIDAQ96BJ3 306 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 ATP6V1G3Q96LB4 118 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 FAM81BQ96LP2 452 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 CCDC43Q96MW1 224 aaKnown RBP10.94□□□□□ -0.66
NFKB1-212ENST00000600343 AGAP3Q96P47 875 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 NDNQ99608 321 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 RHBDL2Q9NX52 303 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 SWAP70Q9UH65 585 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 SH3TC1Q8TE82 1336 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 SLC27A2O14975 620 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 GUCY1B3Q02153 619 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 TMEM110Q86TL2 294 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 SPICE1Q8N0Z3 855 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 KCNV2Q8TDN2 545 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 PHACTR3Q96KR7 559 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 PLCH2O75038 1416 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 BACH1O14867 736 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 PFDN1O60925 122 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 TRIM37O94972 964 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 STAT6P42226 847 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 PABPC4Q13310 644 aaKnown RBP eCLIP10.94□□□□□ -0.662e-10■■■■□ 24.7
NFKB1-212ENST00000600343 BYSLQ13895 437 aaKnown RBP10.94□□□□□ -0.66
NFKB1-212ENST00000600343 ZNF268Q14587 947 aaPredicted RBP10.94□□□□□ -0.66
NFKB1-212ENST00000600343 CCDC80Q76M96 950 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 CPLX4Q7Z7G2 160 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 GBP7Q8N8V2 638 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms