RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 HMG20BQ9P0W2 317 aa21.76■■□□□ 1.07
SSBP4-207ENST00000600244 TBX21Q9UL17 535 aa21.76■■□□□ 1.07
SSBP4-207ENST00000600244 XIRP2A4UGR9 3374 aa21.76■■□□□ 1.07
SSBP4-207ENST00000600244 GH2P01242 217 aa21.75■■□□□ 1.07
SSBP4-207ENST00000600244 VCAM1P19320 739 aa21.75■■□□□ 1.07
SSBP4-207ENST00000600244 RNF180Q86T96 592 aa21.75■■□□□ 1.07
SSBP4-207ENST00000600244 KIAA1683Q9H0B3 1180 aa21.75■■□□□ 1.07
SSBP4-207ENST00000600244 CHD7Q9P2D1 2997 aa21.75■■□□□ 1.07
SSBP4-207ENST00000600244 REV3LO60673 3130 aa21.74■■□□□ 1.07
SSBP4-207ENST00000600244 DCDC2CA8MYV0 355 aa21.74■■□□□ 1.07
SSBP4-207ENST00000600244 PGK1P00558 417 aa21.74■■□□□ 1.07
SSBP4-207ENST00000600244 PPIGQ13427 754 aaKnown RBP eCLIP21.74■■□□□ 1.073e-7■■■■□ 22.5
SSBP4-207ENST00000600244 RAB30Q15771 203 aa21.74■■□□□ 1.07
SSBP4-207ENST00000600244 XAGE2Q96GT9 111 aa21.74■■□□□ 1.07
SSBP4-207ENST00000600244 MSRAQ9UJ68 235 aa21.74■■□□□ 1.07
SSBP4-207ENST00000600244 PALD1Q9ULE6 856 aa21.74■■□□□ 1.07
SSBP4-207ENST00000600244 ERC2O15083 957 aa21.73■■□□□ 1.07
SSBP4-207ENST00000600244 RARBP10826 455 aa21.73■■□□□ 1.07
SSBP4-207ENST00000600244 USP14P54578 494 aa21.73■■□□□ 1.07
SSBP4-207ENST00000600244 CCDC174Q6PII3 467 aa21.73■■□□□ 1.07
SSBP4-207ENST00000600244 PI16Q6UXB8 463 aa21.73■■□□□ 1.07
SSBP4-207ENST00000600244 MAPKAPK5Q8IW41 473 aa21.73■■□□□ 1.07
SSBP4-207ENST00000600244 MRPL50Q8N5N7 158 aaKnown RBP21.73■■□□□ 1.07
SSBP4-207ENST00000600244 SHCBP1Q8NEM2 672 aa21.73■■□□□ 1.07
SSBP4-207ENST00000600244 TGFBRAP1Q8WUH2 860 aa21.73■■□□□ 1.07
SSBP4-207ENST00000600244 MAML3Q96JK9 1138 aa21.73■■□□□ 1.07
SSBP4-207ENST00000600244 FEZ1Q99689 392 aa21.73■■□□□ 1.07
SSBP4-207ENST00000600244 TRIM34Q9BYJ4 488 aa21.73■■□□□ 1.07
SSBP4-207ENST00000600244 RAI14Q9P0K7 980 aa21.73■■□□□ 1.07
SSBP4-207ENST00000600244 NRBP1Q9UHY1 535 aa21.73■■□□□ 1.07
SSBP4-207ENST00000600244 PA2G4Q9UQ80 394 aaKnown RBP21.73■■□□□ 1.07
SSBP4-207ENST00000600244 A0A1B0GUL7 405 aa21.72■■□□□ 1.07
SSBP4-207ENST00000600244 PPP4CP60510 307 aa21.72■■□□□ 1.07
SSBP4-207ENST00000600244 MVPQ14764 893 aaKnown RBP21.72■■□□□ 1.07
SSBP4-207ENST00000600244 ZNF365Q70YC5 407 aa21.72■■□□□ 1.07
SSBP4-207ENST00000600244 SPATA5Q8NB90 893 aa21.72■■□□□ 1.07
SSBP4-207ENST00000600244 NKX2-4Q9H2Z4 354 aa21.72■■□□□ 1.07
SSBP4-207ENST00000600244 COPRSQ9NQ92 184 aa21.72■■□□□ 1.07
SSBP4-207ENST00000600244 SLC5A4Q9NY91 659 aa21.72■■□□□ 1.07
SSBP4-207ENST00000600244 FLT1P17948 1338 aa21.72■■□□□ 1.07
SSBP4-207ENST00000600244 CSF2RAP15509 400 aa21.71■■□□□ 1.07
SSBP4-207ENST00000600244 ERCC3P19447 782 aa21.71■■□□□ 1.07
SSBP4-207ENST00000600244 ABRAQ8N0Z2 381 aa21.71■■□□□ 1.07
SSBP4-207ENST00000600244 ACER1Q8TDN7 264 aa21.71■■□□□ 1.07
SSBP4-207ENST00000600244 KHSRPQ92945 711 aaKnown RBP eCLIP21.71■■□□□ 1.07
SSBP4-207ENST00000600244 TSEN34Q9BSV6 310 aaKnown RBP21.71■■□□□ 1.07
SSBP4-207ENST00000600244 SPATC1LQ9H0A9 340 aa21.71■■□□□ 1.07
SSBP4-207ENST00000600244 RPAP3Q9H6T3 665 aaPredicted RBP21.71■■□□□ 1.07
SSBP4-207ENST00000600244 SLC28A3Q9HAS3 691 aa21.71■■□□□ 1.07
SSBP4-207ENST00000600244 YBX2Q9Y2T7 364 aaKnown RBP21.71■■□□□ 1.07
SSBP4-207ENST00000600244 SALL2Q9Y467 1007 aaPredicted RBP21.71■■□□□ 1.07
SSBP4-207ENST00000600244 ADAMTS4O75173 837 aa21.7■■□□□ 1.06
SSBP4-207ENST00000600244 TATDN1Q6P1N9 297 aa21.7■■□□□ 1.06
SSBP4-207ENST00000600244 HERVK_113Q902F9 699 aa21.7■■□□□ 1.06
SSBP4-207ENST00000600244 AATFQ9NY61 560 aaKnown RBP eCLIP21.7■■□□□ 1.06
SSBP4-207ENST00000600244 PTPRCP08575 1304 aa21.7■■□□□ 1.06
SSBP4-207ENST00000600244 TLL1O43897 1013 aa21.69■■□□□ 1.06
SSBP4-207ENST00000600244 BAG3O95817 575 aa21.69■■□□□ 1.06
SSBP4-207ENST00000600244 ACRP10323 421 aa21.69■■□□□ 1.06
SSBP4-207ENST00000600244 PLCG2P16885 1265 aa21.69■■□□□ 1.06
SSBP4-207ENST00000600244 ACLYP53396 1101 aa21.69■■□□□ 1.06
SSBP4-207ENST00000600244 PSRC1Q6PGN9 363 aaPredicted RBP21.69■■□□□ 1.06
SSBP4-207ENST00000600244 STARD7Q9NQZ5 370 aa21.69■■□□□ 1.06
SSBP4-207ENST00000600244 CDK7P50613 346 aa21.68■■□□□ 1.06
SSBP4-207ENST00000600244 COG2Q14746 738 aa21.68■■□□□ 1.06
SSBP4-207ENST00000600244 NOL10Q9BSC4 688 aaKnown RBP21.68■■□□□ 1.06
SSBP4-207ENST00000600244 MROH8Q9H579 483 aa21.68■■□□□ 1.06
SSBP4-207ENST00000600244 HOXC10Q9NYD6 342 aa21.68■■□□□ 1.06
SSBP4-207ENST00000600244 ROBO3Q96MS0 1386 aa21.68■■□□□ 1.06
SSBP4-207ENST00000600244 CCSAPQ6IQ19 270 aaPredicted RBP21.67■■□□□ 1.06
SSBP4-207ENST00000600244 TMEM199Q8N511 208 aa21.67■■□□□ 1.06
SSBP4-207ENST00000600244 KLHDC9Q8NEP7 349 aa21.67■■□□□ 1.06
SSBP4-207ENST00000600244 NUP133Q8WUM0 1156 aa21.67■■□□□ 1.06
SSBP4-207ENST00000600244 SAP30BPQ9UHR5 308 aaKnown RBP21.67■■□□□ 1.06
SSBP4-207ENST00000600244 AKAP2Q9Y2D5 859 aa21.67■■□□□ 1.06
SSBP4-207ENST00000600244 CDK5RAP2Q96SN8 1893 aa21.66■■□□□ 1.06
SSBP4-207ENST00000600244 ZNF521Q96K83 1311 aa21.66■■□□□ 1.06
SSBP4-207ENST00000600244 FAM86C2PA6NEL3 165 aa21.66■■□□□ 1.06
SSBP4-207ENST00000600244 HLA-DOAP06340 250 aa21.66■■□□□ 1.06
SSBP4-207ENST00000600244 TAL1P17542 331 aaPredicted RBP21.66■■□□□ 1.06
SSBP4-207ENST00000600244 POU3F3P20264 500 aaPredicted RBP21.66■■□□□ 1.06
SSBP4-207ENST00000600244 MRE11P49959 708 aa21.66■■□□□ 1.06
SSBP4-207ENST00000600244 RAB3GAP1Q15042 981 aa21.66■■□□□ 1.06
SSBP4-207ENST00000600244 ATF7IPQ6VMQ6 1270 aa21.66■■□□□ 1.06
SSBP4-207ENST00000600244 MICALL1Q8N3F8 863 aa21.66■■□□□ 1.06
SSBP4-207ENST00000600244 LRP2BPQ9P2M1 347 aa21.66■■□□□ 1.06
SSBP4-207ENST00000600244 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.66■■□□□ 1.06
SSBP4-207ENST00000600244 PRRC2BQ5JSZ5 2229 aaKnown RBP21.65■■□□□ 1.06
SSBP4-207ENST00000600244 FOCADQ5VW36 1801 aa21.65■■□□□ 1.06
SSBP4-207ENST00000600244 ZNF865P0CJ78 1059 aaPredicted RBP21.65■■□□□ 1.06
SSBP4-207ENST00000600244 ARID4AP29374 1257 aaPredicted RBP21.65■■□□□ 1.06
SSBP4-207ENST00000600244 TFCP2Q12800 502 aa21.65■■□□□ 1.06
SSBP4-207ENST00000600244 ADGRA1Q86SQ6 560 aa21.65■■□□□ 1.06
SSBP4-207ENST00000600244 MOXD2PA6NHM9 499 aa21.64■■□□□ 1.05
SSBP4-207ENST00000600244 PI4K2BG5E9Z4 385 aa21.64■■□□□ 1.05
SSBP4-207ENST00000600244 MCAMP43121 646 aa21.64■■□□□ 1.05
SSBP4-207ENST00000600244 NAA16Q6N069 864 aaPredicted RBP21.64■■□□□ 1.05
SSBP4-207ENST00000600244 LENG1Q96BZ8 264 aaPredicted RBP21.64■■□□□ 1.05
SSBP4-207ENST00000600244 TINF2Q9BSI4 451 aa21.64■■□□□ 1.05
SSBP4-207ENST00000600244 IL23AQ9NPF7 189 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms