RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 ANKS1AQ92625 1134 aa16.24■□□□□ 0.19
VRK3-219ENST00000600137 ESR2Q92731 530 aa16.24■□□□□ 0.19
VRK3-219ENST00000600137 ARHGEF10LQ9HCE6 1279 aa16.24■□□□□ 0.19
VRK3-219ENST00000600137 TOMM22Q9NS69 142 aa16.24■□□□□ 0.19
VRK3-219ENST00000600137 CYP2C8P10632 490 aa16.23■□□□□ 0.19
VRK3-219ENST00000600137 VCAM1P19320 739 aa16.23■□□□□ 0.19
VRK3-219ENST00000600137 ANTXR2P58335 489 aa16.23■□□□□ 0.19
VRK3-219ENST00000600137 TAF1CQ15572 869 aaPredicted RBP16.23■□□□□ 0.19
VRK3-219ENST00000600137 MB21D2Q8IYB1 491 aaPredicted RBP16.23■□□□□ 0.19
VRK3-219ENST00000600137 FEZ1Q99689 392 aa16.23■□□□□ 0.19
VRK3-219ENST00000600137 ZKSCAN3Q9BRR0 538 aa16.23■□□□□ 0.19
VRK3-219ENST00000600137 KRT23Q9C075 422 aa16.23■□□□□ 0.19
VRK3-219ENST00000600137 CNNM2Q9H8M5 875 aa16.23■□□□□ 0.19
VRK3-219ENST00000600137 SYNPO2Q9UMS6 1093 aa16.23■□□□□ 0.19
VRK3-219ENST00000600137 F5H6K3 240 aa16.22■□□□□ 0.19
VRK3-219ENST00000600137 REC8O95072 547 aa16.22■□□□□ 0.19
VRK3-219ENST00000600137 ATP2B2Q01814 1243 aa16.22■□□□□ 0.19
VRK3-219ENST00000600137 KLRC3Q07444 240 aa16.22■□□□□ 0.19
VRK3-219ENST00000600137 SEC23AQ15436 765 aa16.22■□□□□ 0.19
VRK3-219ENST00000600137 ADCK5Q3MIX3 580 aa16.22■□□□□ 0.19
VRK3-219ENST00000600137 NOM1Q5C9Z4 860 aaKnown RBP16.22■□□□□ 0.19
VRK3-219ENST00000600137 C17orf99Q6UX52 265 aa16.22■□□□□ 0.19
VRK3-219ENST00000600137 CATSPERGQ6ZRH7 1159 aa16.22■□□□□ 0.19
VRK3-219ENST00000600137 TTC14Q96N46 770 aa16.22■□□□□ 0.19
VRK3-219ENST00000600137 P2RX7Q99572 595 aaKnown RBP16.22■□□□□ 0.19
VRK3-219ENST00000600137 TMEM47Q9BQJ4 181 aa16.22■□□□□ 0.19
VRK3-219ENST00000600137 ASCC2Q9H1I8 757 aaPredicted RBP16.22■□□□□ 0.19
VRK3-219ENST00000600137 TMOD4Q9NZQ9 345 aa16.22■□□□□ 0.19
VRK3-219ENST00000600137 TLR2O60603 784 aa16.21■□□□□ 0.19
VRK3-219ENST00000600137 NDUFB10O96000 172 aa16.21■□□□□ 0.19
VRK3-219ENST00000600137 CAP1Q01518 475 aa16.21■□□□□ 0.19
VRK3-219ENST00000600137 DGKHQ86XP1 1220 aa16.21■□□□□ 0.19
VRK3-219ENST00000600137 SPICE1Q8N0Z3 855 aa16.21■□□□□ 0.19
VRK3-219ENST00000600137 LRRC47Q8N1G4 583 aaKnown RBP16.21■□□□□ 0.19
VRK3-219ENST00000600137 GMCL1P1Q8NEA9 526 aa16.21■□□□□ 0.19
VRK3-219ENST00000600137 NCOA7Q8NI08 942 aa16.21■□□□□ 0.19
VRK3-219ENST00000600137 LPAR1Q92633 364 aa16.21■□□□□ 0.19
VRK3-219ENST00000600137 BEGAINQ9BUH8 593 aa16.21■□□□□ 0.19
VRK3-219ENST00000600137 SH2D4AQ9H788 454 aa16.21■□□□□ 0.19
VRK3-219ENST00000600137 STX8Q9UNK0 236 aa16.21■□□□□ 0.19
VRK3-219ENST00000600137 SNX14Q9Y5W7 946 aa16.21■□□□□ 0.19
VRK3-219ENST00000600137 PARP14Q460N5 1801 aa16.21■□□□□ 0.19
VRK3-219ENST00000600137 CASP8AP2Q9UKL3 1982 aa16.2■□□□□ 0.18
VRK3-219ENST00000600137 USP17L15C9J2P7 530 aa16.2■□□□□ 0.18
VRK3-219ENST00000600137 USP17L13C9JLJ4 530 aa16.2■□□□□ 0.18
VRK3-219ENST00000600137 USP17L11C9JVI0 530 aa16.2■□□□□ 0.18
VRK3-219ENST00000600137 USP17L18D6R9N7 530 aa16.2■□□□□ 0.18
VRK3-219ENST00000600137 USP17L22D6RA61 530 aa16.2■□□□□ 0.18
VRK3-219ENST00000600137 USP17L17D6RBQ6 530 aa16.2■□□□□ 0.18
VRK3-219ENST00000600137 USP17L19D6RCP7 530 aa16.2■□□□□ 0.18
VRK3-219ENST00000600137 USP17L20D6RJB6 530 aa16.2■□□□□ 0.18
VRK3-219ENST00000600137 GPR25O00155 361 aa16.2■□□□□ 0.18
VRK3-219ENST00000600137 BCRP11274 1271 aa16.2■□□□□ 0.18
VRK3-219ENST00000600137 USP17L24Q0WX57 530 aa16.2■□□□□ 0.18
VRK3-219ENST00000600137 ENAHQ8N8S7 591 aaPredicted RBP16.2■□□□□ 0.18
VRK3-219ENST00000600137 IGDCC4Q8TDY8 1250 aa16.2■□□□□ 0.18
VRK3-219ENST00000600137 ZSCAN10Q96SZ4 725 aaPredicted RBP16.2■□□□□ 0.18
VRK3-219ENST00000600137 RPAP3Q9H6T3 665 aaPredicted RBP16.2■□□□□ 0.18
VRK3-219ENST00000600137 SENP2Q9HC62 589 aa16.2■□□□□ 0.18
VRK3-219ENST00000600137 ZFYVE28Q9HCC9 887 aa16.2■□□□□ 0.18
VRK3-219ENST00000600137 WDR46O15213 610 aaKnown RBP16.19■□□□□ 0.18
VRK3-219ENST00000600137 PEX10O60683 326 aa16.19■□□□□ 0.18
VRK3-219ENST00000600137 TOP1P11387 765 aaKnown RBP16.19■□□□□ 0.18
VRK3-219ENST00000600137 CTCFP49711 727 aaPredicted RBP16.19■□□□□ 0.18
VRK3-219ENST00000600137 LBX1P52954 281 aa16.19■□□□□ 0.18
VRK3-219ENST00000600137 EXOSC10Q01780 885 aaKnown RBP16.19■□□□□ 0.18
VRK3-219ENST00000600137 RASGRP2Q7LDG7 609 aa16.19■□□□□ 0.18
VRK3-219ENST00000600137 CHST3Q7LGC8 479 aa16.19■□□□□ 0.18
VRK3-219ENST00000600137 NUP88Q99567 741 aaPredicted RBP16.19■□□□□ 0.18
VRK3-219ENST00000600137 TRDNQ13061 729 aa16.18■□□□□ 0.18
VRK3-219ENST00000600137 PABPC4Q13310 644 aaKnown RBP eCLIP16.18■□□□□ 0.18
VRK3-219ENST00000600137 PPP4R3BQ5MIZ7 849 aa16.18■□□□□ 0.18
VRK3-219ENST00000600137 RNF20Q5VTR2 975 aa16.18■□□□□ 0.18
VRK3-219ENST00000600137 SLFN13Q68D06 897 aa16.18■□□□□ 0.18
VRK3-219ENST00000600137 LBX2Q6XYB7 198 aa16.18■□□□□ 0.18
VRK3-219ENST00000600137 IQCA1Q86XH1 822 aa16.18■□□□□ 0.18
VRK3-219ENST00000600137 PARK7Q99497 189 aaKnown RBP16.18■□□□□ 0.18
VRK3-219ENST00000600137 GOPCQ9HD26 462 aa16.18■□□□□ 0.18
VRK3-219ENST00000600137 GPHNQ9NQX3 736 aaPredicted RBP16.18■□□□□ 0.18
VRK3-219ENST00000600137 FBXO28Q9NVF7 368 aa16.18■□□□□ 0.18
VRK3-219ENST00000600137 RBPJLQ9UBG7 517 aa16.18■□□□□ 0.18
VRK3-219ENST00000600137 CPA4Q9UI42 421 aa16.18■□□□□ 0.18
VRK3-219ENST00000600137 ADAMTS5Q9UNA0 930 aa16.18■□□□□ 0.18
VRK3-219ENST00000600137 TNKSO95271 1327 aa16.18■□□□□ 0.18
VRK3-219ENST00000600137 CNMDO75829 334 aa16.17■□□□□ 0.18
VRK3-219ENST00000600137 SNHG28P0DPA3 235 aa16.17■□□□□ 0.18
VRK3-219ENST00000600137 OSBPP22059 807 aa16.17■□□□□ 0.18
VRK3-219ENST00000600137 DSG3P32926 999 aa16.17■□□□□ 0.18
VRK3-219ENST00000600137 HERVK_113P62684 666 aa16.17■□□□□ 0.18
VRK3-219ENST00000600137 CCDC178Q5BJE1 867 aa16.17■□□□□ 0.18
VRK3-219ENST00000600137 FAM83BQ5T0W9 1011 aa16.17■□□□□ 0.18
VRK3-219ENST00000600137 ZNF296Q8WUU4 475 aaPredicted RBP16.17■□□□□ 0.18
VRK3-219ENST00000600137 GMCL1Q96IK5 515 aa16.17■□□□□ 0.18
VRK3-219ENST00000600137 NEK1Q96PY6 1258 aa16.17■□□□□ 0.18
VRK3-219ENST00000600137 MTA3Q9BTC8 594 aa16.17■□□□□ 0.18
VRK3-219ENST00000600137 TXNRD2Q9NNW7 524 aa16.17■□□□□ 0.18
VRK3-219ENST00000600137 SPDYE16A6NNV3 312 aaPredicted RBP16.16■□□□□ 0.18
VRK3-219ENST00000600137 MCCP23508 829 aa16.16■□□□□ 0.18
VRK3-219ENST00000600137 CTGFP29279 349 aa16.16■□□□□ 0.18
VRK3-219ENST00000600137 COG2Q14746 738 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 223.4 ms