RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 ARMT1Q9H993 441 aa23.31■■□□□ 1.32
IRF3-222ENST00000599144 MYH1P12882 1939 aa23.31■■□□□ 1.32
IRF3-222ENST00000599144 PRKAB2O43741 272 aa23.3■■□□□ 1.32
IRF3-222ENST00000599144 MYCNP04198 464 aaPredicted RBP23.3■■□□□ 1.32
IRF3-222ENST00000599144 HOXC6P09630 235 aa23.3■■□□□ 1.32
IRF3-222ENST00000599144 COBLO75128 1261 aa23.29■■□□□ 1.32
IRF3-222ENST00000599144 CYBAP13498 195 aa23.29■■□□□ 1.32
IRF3-222ENST00000599144 ERCC3P19447 782 aa23.29■■□□□ 1.32
IRF3-222ENST00000599144 ADORA2AP29274 412 aa23.29■■□□□ 1.32
IRF3-222ENST00000599144 PRAMEF19Q5SWL8 479 aa23.29■■□□□ 1.32
IRF3-222ENST00000599144 GPR153Q6NV75 609 aa23.29■■□□□ 1.32
IRF3-222ENST00000599144 DPP9Q86TI2 863 aa23.29■■□□□ 1.32
IRF3-222ENST00000599144 ERC1Q8IUD2 1116 aa23.29■■□□□ 1.32
IRF3-222ENST00000599144 SPICE1Q8N0Z3 855 aa23.29■■□□□ 1.32
IRF3-222ENST00000599144 LPAR1Q92633 364 aa23.29■■□□□ 1.32
IRF3-222ENST00000599144 FAM161BQ96MY7 647 aa23.29■■□□□ 1.32
IRF3-222ENST00000599144 DCP1AQ9NPI6 582 aaPredicted RBP23.29■■□□□ 1.32
IRF3-222ENST00000599144 CYP2D7A0A087X1C5 515 aa23.28■■□□□ 1.32
IRF3-222ENST00000599144 TCRBV5S4A2TA0A5A2 114 aa23.28■■□□□ 1.32
IRF3-222ENST00000599144 AKR1B1P15121 316 aa23.28■■□□□ 1.32
IRF3-222ENST00000599144 RTP1P59025 263 aa23.28■■□□□ 1.32
IRF3-222ENST00000599144 COG2Q14746 738 aa23.28■■□□□ 1.32
IRF3-222ENST00000599144 SPATC1LQ9H0A9 340 aa23.28■■□□□ 1.32
IRF3-222ENST00000599144 ATP11BQ9Y2G3 1177 aa23.28■■□□□ 1.32
IRF3-222ENST00000599144 IGHA2P01877 340 aa23.27■■□□□ 1.32
IRF3-222ENST00000599144 PLS1Q14651 629 aa23.27■■□□□ 1.32
IRF3-222ENST00000599144 SIAH1Q8IUQ4 282 aa23.27■■□□□ 1.32
IRF3-222ENST00000599144 ATG4CQ96DT6 458 aa23.27■■□□□ 1.32
IRF3-222ENST00000599144 STXBP5LQ9Y2K9 1186 aa23.27■■□□□ 1.32
IRF3-222ENST00000599144 COL6A3P12111 3177 aa23.26■■□□□ 1.31
IRF3-222ENST00000599144 TTF1Q15361 905 aaPredicted RBP23.26■■□□□ 1.31
IRF3-222ENST00000599144 DNM1LO00429 736 aa23.25■■□□□ 1.31
IRF3-222ENST00000599144 MBD4O95243 580 aa23.25■■□□□ 1.31
IRF3-222ENST00000599144 NCAPG2Q86XI2 1143 aa23.25■■□□□ 1.31
IRF3-222ENST00000599144 LBHD1Q9BQE6 289 aaPredicted RBP23.25■■□□□ 1.31
IRF3-222ENST00000599144 FLOT1O75955 427 aa23.24■■□□□ 1.31
IRF3-222ENST00000599144 DSG3P32926 999 aa23.24■■□□□ 1.31
IRF3-222ENST00000599144 SIRT2Q8IXJ6 389 aa23.24■■□□□ 1.31
IRF3-222ENST00000599144 CLASRPQ8N2M8 674 aaKnown RBP23.24■■□□□ 1.31
IRF3-222ENST00000599144 BOLA2Q9H3K6 86 aa23.24■■□□□ 1.31
IRF3-222ENST00000599144 HOXC10Q9NYD6 342 aa23.24■■□□□ 1.31
IRF3-222ENST00000599144 MSCO60682 206 aa23.23■■□□□ 1.31
IRF3-222ENST00000599144 IFIT2P09913 472 aaKnown RBP23.23■■□□□ 1.31
IRF3-222ENST00000599144 ICA1Q05084 483 aa23.23■■□□□ 1.31
IRF3-222ENST00000599144 TMEM179Q6ZVK1 233 aa23.23■■□□□ 1.31
IRF3-222ENST00000599144 MIER1Q8N108 512 aa23.23■■□□□ 1.31
IRF3-222ENST00000599144 FERMT2Q96AC1 680 aa23.23■■□□□ 1.31
IRF3-222ENST00000599144 GUCD1Q96NT3 240 aa23.23■■□□□ 1.31
IRF3-222ENST00000599144 PRDM5Q9NQX1 630 aaPredicted RBP23.23■■□□□ 1.31
IRF3-222ENST00000599144 NAV1Q8NEY1 1877 aa23.23■■□□□ 1.31
IRF3-222ENST00000599144 TRIM60Q495X7 471 aa23.22■■□□□ 1.31
IRF3-222ENST00000599144 HSP90AB4PQ58FF6 505 aa23.22■■□□□ 1.31
IRF3-222ENST00000599144 OLFML2BQ68BL8 750 aa23.22■■□□□ 1.31
IRF3-222ENST00000599144 KIF1BPQ96EK5 621 aa23.22■■□□□ 1.31
IRF3-222ENST00000599144 FBXO28Q9NVF7 368 aa23.22■■□□□ 1.31
IRF3-222ENST00000599144 FRMPD3Q5JV73 1810 aa23.22■■□□□ 1.31
IRF3-222ENST00000599144 ADCYAP1R1P41586 468 aa23.21■■□□□ 1.31
IRF3-222ENST00000599144 FAM47AQ5JRC9 791 aa23.21■■□□□ 1.31
IRF3-222ENST00000599144 C9orf50Q5SZB4 431 aa23.21■■□□□ 1.31
IRF3-222ENST00000599144 TMED8Q6PL24 325 aaPredicted RBP23.21■■□□□ 1.31
IRF3-222ENST00000599144 SLC39A5Q6ZMH5 540 aa23.21■■□□□ 1.31
IRF3-222ENST00000599144 SHCBP1Q8NEM2 672 aa23.21■■□□□ 1.31
IRF3-222ENST00000599144 PRKAG2Q9UGJ0 569 aa23.21■■□□□ 1.31
IRF3-222ENST00000599144 PGK2P07205 417 aa23.2■■□□□ 1.3
IRF3-222ENST00000599144 ADD2P35612 726 aa23.2■■□□□ 1.3
IRF3-222ENST00000599144 TMEM132BQ14DG7 1078 aa23.2■■□□□ 1.3
IRF3-222ENST00000599144 SHHQ15465 462 aa23.2■■□□□ 1.3
IRF3-222ENST00000599144 SH3RF1Q7Z6J0 888 aa23.2■■□□□ 1.3
IRF3-222ENST00000599144 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.2■■□□□ 1.3
IRF3-222ENST00000599144 VCPKMTQ9H867 229 aa23.2■■□□□ 1.3
IRF3-222ENST00000599144 PAG1Q9NWQ8 432 aa23.2■■□□□ 1.3
IRF3-222ENST00000599144 COG6Q9Y2V7 657 aa23.2■■□□□ 1.3
IRF3-222ENST00000599144 TMX2Q9Y320 296 aa23.2■■□□□ 1.3
IRF3-222ENST00000599144 USP17L12C9JPN9 530 aa23.19■■□□□ 1.3
IRF3-222ENST00000599144 KBTBD13C9JR72 458 aa23.19■■□□□ 1.3
IRF3-222ENST00000599144 USP17L21D6R901 530 aa23.19■■□□□ 1.3
IRF3-222ENST00000599144 POTEB2H3BUK9 544 aa23.19■■□□□ 1.3
IRF3-222ENST00000599144 SEPT4O43236 478 aa23.19■■□□□ 1.3
IRF3-222ENST00000599144 STRNO43815 780 aa23.19■■□□□ 1.3
IRF3-222ENST00000599144 CDK8P49336 464 aa23.19■■□□□ 1.3
IRF3-222ENST00000599144 ARRDC4Q8NCT1 418 aa23.19■■□□□ 1.3
IRF3-222ENST00000599144 BADQ92934 168 aa23.19■■□□□ 1.3
IRF3-222ENST00000599144 MAML3Q96JK9 1138 aa23.19■■□□□ 1.3
IRF3-222ENST00000599144 ARHGEF10LQ9HCE6 1279 aa23.19■■□□□ 1.3
IRF3-222ENST00000599144 SWAP70Q9UH65 585 aa23.19■■□□□ 1.3
IRF3-222ENST00000599144 RAD21O60216 631 aa23.18■■□□□ 1.3
IRF3-222ENST00000599144 EEF2P13639 858 aaKnown RBP23.18■■□□□ 1.3
IRF3-222ENST00000599144 LRRC41Q15345 812 aa23.18■■□□□ 1.3
IRF3-222ENST00000599144 STK11IPQ8N1F8 1099 aa23.18■■□□□ 1.3
IRF3-222ENST00000599144 LENG1Q96BZ8 264 aaPredicted RBP23.18■■□□□ 1.3
IRF3-222ENST00000599144 MROH8Q9H579 483 aa23.18■■□□□ 1.3
IRF3-222ENST00000599144 TAL1P17542 331 aaPredicted RBP23.17■■□□□ 1.3
IRF3-222ENST00000599144 C12orf60Q5U649 245 aa23.17■■□□□ 1.3
IRF3-222ENST00000599144 MB21D1Q8N884 522 aa23.17■■□□□ 1.3
IRF3-222ENST00000599144 A0A0G2JMZ2 1700 aa23.16■■□□□ 1.3
IRF3-222ENST00000599144 TRIM43BA6NCK2 446 aa23.16■■□□□ 1.3
IRF3-222ENST00000599144 TRIM43Q96BQ3 446 aaPredicted RBP23.16■■□□□ 1.3
IRF3-222ENST00000599144 PDLIM7Q9NR12 457 aa23.16■■□□□ 1.3
IRF3-222ENST00000599144 WDR46O15213 610 aaKnown RBP23.15■■□□□ 1.3
IRF3-222ENST00000599144 FCER1AP12319 257 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms