RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 SPICE1Q8N0Z3 855 aa27.51■■□□□ 1.99
CCDC61-207ENST00000599044 TANGO6Q9C0B7 1094 aa27.51■■□□□ 1.99
CCDC61-207ENST00000599044 TMX2Q9Y320 296 aa27.51■■□□□ 1.99
CCDC61-207ENST00000599044 RNF113AO15541 343 aaKnown RBP27.5■■□□□ 1.99
CCDC61-207ENST00000599044 ZKSCAN1P17029 563 aaPredicted RBP27.5■■□□□ 1.99
CCDC61-207ENST00000599044 RGS2P41220 211 aa27.5■■□□□ 1.99
CCDC61-207ENST00000599044 MNX1P50219 401 aaPredicted RBP27.5■■□□□ 1.99
CCDC61-207ENST00000599044 ICA1Q05084 483 aa27.5■■□□□ 1.99
CCDC61-207ENST00000599044 MAP2K5Q13163 448 aa27.5■■□□□ 1.99
CCDC61-207ENST00000599044 COG2Q14746 738 aa27.5■■□□□ 1.99
CCDC61-207ENST00000599044 WDR78Q5VTH9 848 aa27.5■■□□□ 1.99
CCDC61-207ENST00000599044 GPATCH3Q96I76 525 aa27.5■■□□□ 1.99
CCDC61-207ENST00000599044 CCDC17Q96LX7 622 aa27.5■■□□□ 1.99
CCDC61-207ENST00000599044 FLRT1Q9NZU1 646 aa27.5■■□□□ 1.99
CCDC61-207ENST00000599044 PTPREP23469 700 aa27.49■■□□□ 1.99
CCDC61-207ENST00000599044 CCNA1P78396 465 aa27.49■■□□□ 1.99
CCDC61-207ENST00000599044 AMOTL1Q8IY63 956 aa27.49■■□□□ 1.99
CCDC61-207ENST00000599044 STK11IPQ8N1F8 1099 aa27.49■■□□□ 1.99
CCDC61-207ENST00000599044 PI4K2BQ8TCG2 481 aa27.49■■□□□ 1.99
CCDC61-207ENST00000599044 APPBP2Q92624 585 aa27.49■■□□□ 1.99
CCDC61-207ENST00000599044 DDRGK1Q96HY6 314 aa27.49■■□□□ 1.99
CCDC61-207ENST00000599044 CRBNQ96SW2 442 aa27.49■■□□□ 1.99
CCDC61-207ENST00000599044 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.49■■□□□ 1.99
CCDC61-207ENST00000599044 CWC22Q9HCG8 908 aaKnown RBP27.49■■□□□ 1.99
CCDC61-207ENST00000599044 M0R2C6 588 aa27.48■■□□□ 1.99
CCDC61-207ENST00000599044 EEF2P13639 858 aaKnown RBP27.48■■□□□ 1.99
CCDC61-207ENST00000599044 CCND3P30281 292 aaPredicted RBP27.48■■□□□ 1.99
CCDC61-207ENST00000599044 APBA2Q99767 749 aa27.48■■□□□ 1.99
CCDC61-207ENST00000599044 VCPKMTQ9H867 229 aa27.48■■□□□ 1.99
CCDC61-207ENST00000599044 ARHGEF10LQ9HCE6 1279 aa27.48■■□□□ 1.99
CCDC61-207ENST00000599044 HOXC10Q9NYD6 342 aa27.48■■□□□ 1.99
CCDC61-207ENST00000599044 MOV10L1Q9BXT6 1211 aaKnown RBP27.47■■□□□ 1.99
CCDC61-207ENST00000599044 EPB41L4AQ9HCS5 686 aaPredicted RBP27.47■■□□□ 1.99
CCDC61-207ENST00000599044 ARPP21Q9UBL0 812 aaPredicted RBP27.47■■□□□ 1.99
CCDC61-207ENST00000599044 RLFQ13129 1914 aa27.46■■□□□ 1.99
CCDC61-207ENST00000599044 SLC15A5A6NIM6 579 aa27.46■■□□□ 1.99
CCDC61-207ENST00000599044 GPAA1O43292 621 aa27.46■■□□□ 1.99
CCDC61-207ENST00000599044 CAPN2P17655 700 aa27.46■■□□□ 1.99
CCDC61-207ENST00000599044 ATP2B2Q01814 1243 aa27.46■■□□□ 1.99
CCDC61-207ENST00000599044 SBK1Q52WX2 424 aa27.46■■□□□ 1.99
CCDC61-207ENST00000599044 CHRDL2Q6WN34 429 aa27.46■■□□□ 1.99
CCDC61-207ENST00000599044 TRMT44Q8IYL2 757 aaKnown RBP27.46■■□□□ 1.99
CCDC61-207ENST00000599044 SEC62Q99442 399 aaKnown RBP27.46■■□□□ 1.99
CCDC61-207ENST00000599044 OGDHLQ9ULD0 1010 aa27.46■■□□□ 1.99
CCDC61-207ENST00000599044 SZT2Q5T011 3432 aa27.45■■□□□ 1.99
CCDC61-207ENST00000599044 TTC41PQ6P2S7 1318 aa27.45■■□□□ 1.99
CCDC61-207ENST00000599044 DSG3P32926 999 aa27.45■■□□□ 1.98
CCDC61-207ENST00000599044 GRB14Q14449 540 aa27.45■■□□□ 1.98
CCDC61-207ENST00000599044 NECAB2Q7Z6G3 386 aa27.45■■□□□ 1.98
CCDC61-207ENST00000599044 NPLOC4Q8TAT6 608 aa27.45■■□□□ 1.98
CCDC61-207ENST00000599044 LPAR1Q92633 364 aa27.45■■□□□ 1.98
CCDC61-207ENST00000599044 ATG4CQ96DT6 458 aa27.45■■□□□ 1.98
CCDC61-207ENST00000599044 MYH8P13535 1937 aa27.44■■□□□ 1.98
CCDC61-207ENST00000599044 MINDY4BA8MYZ0 360 aa27.44■■□□□ 1.98
CCDC61-207ENST00000599044 FLOT1O75955 427 aa27.44■■□□□ 1.98
CCDC61-207ENST00000599044 GLRX3O76003 335 aaKnown RBP27.44■■□□□ 1.98
CCDC61-207ENST00000599044 RASA1P20936 1047 aa27.44■■□□□ 1.98
CCDC61-207ENST00000599044 LHX8Q68G74 356 aa27.44■■□□□ 1.98
CCDC61-207ENST00000599044 ANKLE1Q8NAG6 615 aa27.44■■□□□ 1.98
CCDC61-207ENST00000599044 SPATC1LQ9H0A9 340 aa27.44■■□□□ 1.98
CCDC61-207ENST00000599044 KANSL2Q9H9L4 492 aa27.44■■□□□ 1.98
CCDC61-207ENST00000599044 ZFYP08048 801 aaPredicted RBP27.43■■□□□ 1.98
CCDC61-207ENST00000599044 GIMAP6Q6P9H5 292 aa27.43■■□□□ 1.98
CCDC61-207ENST00000599044 SAMD1Q6SPF0 538 aaPredicted RBP27.43■■□□□ 1.98
CCDC61-207ENST00000599044 SH2D4AQ9H788 454 aa27.43■■□□□ 1.98
CCDC61-207ENST00000599044 EVI5O60447 810 aa27.42■■□□□ 1.98
CCDC61-207ENST00000599044 HOXC6P09630 235 aa27.42■■□□□ 1.98
CCDC61-207ENST00000599044 ERCC3P19447 782 aa27.42■■□□□ 1.98
CCDC61-207ENST00000599044 FBXO28Q9NVF7 368 aa27.42■■□□□ 1.98
CCDC61-207ENST00000599044 RBM27Q9P2N5 1060 aaKnown RBP27.42■■□□□ 1.98
CCDC61-207ENST00000599044 NR2E3Q9Y5X4 410 aa27.42■■□□□ 1.98
CCDC61-207ENST00000599044 IVNS1ABPQ9Y6Y0 642 aa27.42■■□□□ 1.98
CCDC61-207ENST00000599044 SALL3Q9BXA9 1300 aa27.41■■□□□ 1.98
CCDC61-207ENST00000599044 A0A0G2JMZ2 1700 aa27.41■■□□□ 1.98
CCDC61-207ENST00000599044 WDR46O15213 610 aaKnown RBP27.41■■□□□ 1.98
CCDC61-207ENST00000599044 ROBO3Q96MS0 1386 aa27.4■■□□□ 1.98
CCDC61-207ENST00000599044 ERC2O15083 957 aa27.4■■□□□ 1.98
CCDC61-207ENST00000599044 IGHA2P01877 340 aa27.4■■□□□ 1.98
CCDC61-207ENST00000599044 MX1P20591 662 aa27.4■■□□□ 1.98
CCDC61-207ENST00000599044 PLS1Q14651 629 aa27.4■■□□□ 1.98
CCDC61-207ENST00000599044 NBPF3Q9H094 633 aa27.4■■□□□ 1.98
CCDC61-207ENST00000599044 PRO3102Q9H379 93 aa27.4■■□□□ 1.98
CCDC61-207ENST00000599044 PATL2C9JE40 543 aaKnown RBP27.39■■□□□ 1.98
CCDC61-207ENST00000599044 APPP05067 770 aa27.39■■□□□ 1.98
CCDC61-207ENST00000599044 ADORA2AP29274 412 aa27.39■■□□□ 1.98
CCDC61-207ENST00000599044 CYP2C19P33261 490 aa27.39■■□□□ 1.98
CCDC61-207ENST00000599044 TMEM132BQ14DG7 1078 aa27.39■■□□□ 1.98
CCDC61-207ENST00000599044 ANKRD45Q5TZF3 282 aa27.39■■□□□ 1.98
CCDC61-207ENST00000599044 IFNL3Q8IZI9 196 aa27.39■■□□□ 1.98
CCDC61-207ENST00000599044 TRPV1Q8NER1 839 aa27.39■■□□□ 1.98
CCDC61-207ENST00000599044 C11orf49Q9H6J7 331 aa27.39■■□□□ 1.98
CCDC61-207ENST00000599044 MKNK2Q9HBH9 465 aa27.39■■□□□ 1.98
CCDC61-207ENST00000599044 ADAMTS5Q9UNA0 930 aa27.39■■□□□ 1.98
CCDC61-207ENST00000599044 FRMPD3Q5JV73 1810 aa27.39■■□□□ 1.97
CCDC61-207ENST00000599044 COBLO75128 1261 aa27.38■■□□□ 1.97
CCDC61-207ENST00000599044 PRDM1O75626 825 aa27.38■■□□□ 1.97
CCDC61-207ENST00000599044 GNAT2P19087 354 aa27.38■■□□□ 1.97
CCDC61-207ENST00000599044 TDO2P48775 406 aa27.38■■□□□ 1.97
CCDC61-207ENST00000599044 FAM83BQ5T0W9 1011 aa27.38■■□□□ 1.97
CCDC61-207ENST00000599044 MFSD14CQ5VZR4 134 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms