RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 EXOC6Q8TAG9 804 aa16.49■□□□□ 0.23
SCAF1-203ENST00000598359 TANGO6Q9C0B7 1094 aa16.49■□□□□ 0.23
SCAF1-203ENST00000598359 BTBD7Q9P203 1132 aa16.49■□□□□ 0.23
SCAF1-203ENST00000598359 ARPP21Q9UBL0 812 aaPredicted RBP16.49■□□□□ 0.23
SCAF1-203ENST00000598359 SPDYE16A6NNV3 312 aaPredicted RBP16.48■□□□□ 0.23
SCAF1-203ENST00000598359 APPP05067 770 aa16.48■□□□□ 0.23
SCAF1-203ENST00000598359 SAMD1Q6SPF0 538 aaPredicted RBP16.48■□□□□ 0.23
SCAF1-203ENST00000598359 GPR142Q7Z601 462 aa16.48■□□□□ 0.23
SCAF1-203ENST00000598359 CCAR1Q8IX12 1150 aaKnown RBP16.48■□□□□ 0.23
SCAF1-203ENST00000598359 U2AF1L4Q8WU68 220 aaKnown RBP16.48■□□□□ 0.23
SCAF1-203ENST00000598359 DEFB118Q96PH6 123 aa16.48■□□□□ 0.23
SCAF1-203ENST00000598359 ZBTB47Q9UFB7 747 aaPredicted RBP16.48■□□□□ 0.23
SCAF1-203ENST00000598359 RABGAP1Q9Y3P9 1069 aa16.48■□□□□ 0.23
SCAF1-203ENST00000598359 EEF2P13639 858 aaKnown RBP16.47■□□□□ 0.23
SCAF1-203ENST00000598359 MAPK4P31152 587 aa16.47■□□□□ 0.23
SCAF1-203ENST00000598359 TDO2P48775 406 aa16.47■□□□□ 0.23
SCAF1-203ENST00000598359 SBK1Q52WX2 424 aa16.47■□□□□ 0.23
SCAF1-203ENST00000598359 WDR78Q5VTH9 848 aa16.47■□□□□ 0.23
SCAF1-203ENST00000598359 B4GALNT3Q6L9W6 998 aa16.47■□□□□ 0.23
SCAF1-203ENST00000598359 CHRDL2Q6WN34 429 aa16.47■□□□□ 0.23
SCAF1-203ENST00000598359 CCDC129Q6ZRS4 1044 aa16.47■□□□□ 0.23
SCAF1-203ENST00000598359 PLEKHH3Q7Z736 793 aa16.47■□□□□ 0.23
SCAF1-203ENST00000598359 GTF3C2Q8WUA4 911 aaPredicted RBP16.47■□□□□ 0.23
SCAF1-203ENST00000598359 TRIB2Q92519 343 aa16.47■□□□□ 0.23
SCAF1-203ENST00000598359 CCDC17Q96LX7 622 aa16.47■□□□□ 0.23
SCAF1-203ENST00000598359 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.47■□□□□ 0.23
SCAF1-203ENST00000598359 ARHGEF10LQ9HCE6 1279 aa16.47■□□□□ 0.23
SCAF1-203ENST00000598359 CWC22Q9HCG8 908 aaKnown RBP16.47■□□□□ 0.23
SCAF1-203ENST00000598359 TMX2Q9Y320 296 aa16.47■□□□□ 0.23
SCAF1-203ENST00000598359 PRDM1O75626 825 aa16.46■□□□□ 0.23
SCAF1-203ENST00000598359 SGPL1O95470 568 aa16.46■□□□□ 0.23
SCAF1-203ENST00000598359 HMGCRP04035 888 aa16.46■□□□□ 0.23
SCAF1-203ENST00000598359 RASA1P20936 1047 aa16.46■□□□□ 0.23
SCAF1-203ENST00000598359 CCL14Q16627 93 aa16.46■□□□□ 0.23
SCAF1-203ENST00000598359 ZMYM1Q5SVZ6 1142 aa16.46■□□□□ 0.23
SCAF1-203ENST00000598359 NUDT12Q9BQG2 462 aa16.46■□□□□ 0.23
SCAF1-203ENST00000598359 LNPKQ9C0E8 428 aa16.46■□□□□ 0.23
SCAF1-203ENST00000598359 VCPKMTQ9H867 229 aa16.46■□□□□ 0.23
SCAF1-203ENST00000598359 RAD21O60216 631 aa16.45■□□□□ 0.22
SCAF1-203ENST00000598359 IGHDP01880 384 aa16.45■□□□□ 0.22
SCAF1-203ENST00000598359 TFRCP02786 760 aaKnown RBP16.45■□□□□ 0.22
SCAF1-203ENST00000598359 PDE1AP54750 535 aa16.45■□□□□ 0.22
SCAF1-203ENST00000598359 COG2Q14746 738 aa16.45■□□□□ 0.22
SCAF1-203ENST00000598359 MORN1Q5T089 497 aa16.45■□□□□ 0.22
SCAF1-203ENST00000598359 GIMAP6Q6P9H5 292 aa16.45■□□□□ 0.22
SCAF1-203ENST00000598359 LBX2Q6XYB7 198 aa16.45■□□□□ 0.22
SCAF1-203ENST00000598359 IFNL3Q8IZI9 196 aa16.45■□□□□ 0.22
SCAF1-203ENST00000598359 NKX2-3Q8TAU0 364 aa16.45■□□□□ 0.22
SCAF1-203ENST00000598359 USP6NLQ92738 828 aa16.45■□□□□ 0.22
SCAF1-203ENST00000598359 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.45■□□□□ 0.22
SCAF1-203ENST00000598359 MKNK2Q9HBH9 465 aa16.45■□□□□ 0.22
SCAF1-203ENST00000598359 PAK6Q9NQU5 681 aaPredicted RBP16.45■□□□□ 0.22
SCAF1-203ENST00000598359 RBM27Q9P2N5 1060 aaKnown RBP16.45■□□□□ 0.22
SCAF1-203ENST00000598359 STAP2Q9UGK3 403 aa16.45■□□□□ 0.22
SCAF1-203ENST00000598359 ROBO3Q96MS0 1386 aa16.44■□□□□ 0.22
SCAF1-203ENST00000598359 PATL2C9JE40 543 aaKnown RBP16.44■□□□□ 0.22
SCAF1-203ENST00000598359 GNAT2P19087 354 aa16.44■□□□□ 0.22
SCAF1-203ENST00000598359 LRRFIP1Q32MZ4 808 aaKnown RBP16.44■□□□□ 0.22
SCAF1-203ENST00000598359 UBE2Q1Q7Z7E8 422 aa16.44■□□□□ 0.22
SCAF1-203ENST00000598359 SOCS4Q8WXH5 440 aa16.44■□□□□ 0.22
SCAF1-203ENST00000598359 ATG4CQ96DT6 458 aa16.44■□□□□ 0.22
SCAF1-203ENST00000598359 SH2D4AQ9H788 454 aa16.44■□□□□ 0.22
SCAF1-203ENST00000598359 KANSL2Q9H9L4 492 aa16.44■□□□□ 0.22
SCAF1-203ENST00000598359 FBXO28Q9NVF7 368 aa16.44■□□□□ 0.22
SCAF1-203ENST00000598359 FOXP2O15409 715 aa16.43■□□□□ 0.22
SCAF1-203ENST00000598359 FLOT1O75955 427 aa16.43■□□□□ 0.22
SCAF1-203ENST00000598359 FARP2O94887 1054 aaPredicted RBP16.43■□□□□ 0.22
SCAF1-203ENST00000598359 PRKAR2AP13861 404 aaKnown RBP16.43■□□□□ 0.22
SCAF1-203ENST00000598359 ZKSCAN1P17029 563 aaPredicted RBP16.43■□□□□ 0.22
SCAF1-203ENST00000598359 CCNA1P78396 465 aa16.43■□□□□ 0.22
SCAF1-203ENST00000598359 LPAR1Q92633 364 aa16.43■□□□□ 0.22
SCAF1-203ENST00000598359 MOV10L1Q9BXT6 1211 aaKnown RBP16.43■□□□□ 0.22
SCAF1-203ENST00000598359 HOXC10Q9NYD6 342 aa16.43■□□□□ 0.22
SCAF1-203ENST00000598359 RLFQ13129 1914 aa16.43■□□□□ 0.22
SCAF1-203ENST00000598359 XRCC5P13010 732 aaKnown RBP16.42■□□□□ 0.22
SCAF1-203ENST00000598359 PTPREP23469 700 aa16.42■□□□□ 0.22
SCAF1-203ENST00000598359 DSG3P32926 999 aa16.42■□□□□ 0.22
SCAF1-203ENST00000598359 RGS2P41220 211 aa16.42■□□□□ 0.22
SCAF1-203ENST00000598359 MAP2K5Q13163 448 aa16.42■□□□□ 0.22
SCAF1-203ENST00000598359 PLS1Q14651 629 aa16.42■□□□□ 0.22
SCAF1-203ENST00000598359 NUP88Q99567 741 aaPredicted RBP16.42■□□□□ 0.22
SCAF1-203ENST00000598359 RWDD1Q9H446 243 aaPredicted RBP16.42■□□□□ 0.22
SCAF1-203ENST00000598359 HMX1Q9NP08 348 aaPredicted RBP16.42■□□□□ 0.22
SCAF1-203ENST00000598359 FLRT1Q9NZU1 646 aa16.42■□□□□ 0.22
SCAF1-203ENST00000598359 RPTORQ8N122 1335 aa16.42■□□□□ 0.22
SCAF1-203ENST00000598359 GREB1LQ9C091 1923 aaPredicted RBP16.41■□□□□ 0.22
SCAF1-203ENST00000598359 WDR46O15213 610 aaKnown RBP16.41■□□□□ 0.22
SCAF1-203ENST00000598359 IRX6P78412 446 aaPredicted RBP16.41■□□□□ 0.22
SCAF1-203ENST00000598359 CACNB2Q08289 660 aaPredicted RBP16.41■□□□□ 0.22
SCAF1-203ENST00000598359 FAM83BQ5T0W9 1011 aa16.41■□□□□ 0.22
SCAF1-203ENST00000598359 VPS53Q5VIR6 699 aa16.41■□□□□ 0.22
SCAF1-203ENST00000598359 SMC5Q8IY18 1101 aa16.41■□□□□ 0.22
SCAF1-203ENST00000598359 DIS3LQ8TF46 1054 aaKnown RBP16.41■□□□□ 0.22
SCAF1-203ENST00000598359 DPF3Q92784 378 aa16.41■□□□□ 0.22
SCAF1-203ENST00000598359 EVI5LQ96CN4 794 aa16.41■□□□□ 0.22
SCAF1-203ENST00000598359 FAM227BQ96M60 508 aa16.41■□□□□ 0.22
SCAF1-203ENST00000598359 APBA2Q99767 749 aa16.41■□□□□ 0.22
SCAF1-203ENST00000598359 NACAP1Q9BZK3 213 aa16.41■□□□□ 0.22
SCAF1-203ENST00000598359 SPATC1LQ9H0A9 340 aa16.41■□□□□ 0.22
SCAF1-203ENST00000598359 CRISPLD2Q9H0B8 497 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms