RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 Q3C1V9 767 aa27.1■■□□□ 1.93
IRF3-220ENST00000598108 NEDD1Q8NHV4 660 aa27.1■■□□□ 1.93
IRF3-220ENST00000598108 NYAP2Q9P242 653 aa27.1■■□□□ 1.93
IRF3-220ENST00000598108 ZSWIM8A7E2V4 1837 aa27.1■■□□□ 1.93
IRF3-220ENST00000598108 CHMLP26374 656 aa27.09■■□□□ 1.93
IRF3-220ENST00000598108 HAND2P61296 217 aa27.09■■□□□ 1.93
IRF3-220ENST00000598108 LPAR1Q92633 364 aa27.09■■□□□ 1.93
IRF3-220ENST00000598108 CEP95Q96GE4 821 aa27.09■■□□□ 1.93
IRF3-220ENST00000598108 NBPF3Q9H094 633 aa27.09■■□□□ 1.93
IRF3-220ENST00000598108 SH2D4AQ9H788 454 aa27.09■■□□□ 1.93
IRF3-220ENST00000598108 MTMR4Q9NYA4 1195 aa27.09■■□□□ 1.93
IRF3-220ENST00000598108 CLIP2Q9UDT6 1046 aa27.09■■□□□ 1.93
IRF3-220ENST00000598108 GABRQQ9UN88 632 aa27.09■■□□□ 1.93
IRF3-220ENST00000598108 CNMDO75829 334 aa27.08■■□□□ 1.93
IRF3-220ENST00000598108 FGRP09769 529 aa27.08■■□□□ 1.93
IRF3-220ENST00000598108 TSPY3P0CV98 308 aa27.08■■□□□ 1.93
IRF3-220ENST00000598108 TSPY8P0CW00 308 aa27.08■■□□□ 1.93
IRF3-220ENST00000598108 HOXD10P28358 340 aa27.08■■□□□ 1.93
IRF3-220ENST00000598108 PRKCZQ05513 592 aa27.08■■□□□ 1.93
IRF3-220ENST00000598108 GPRC5AQ8NFJ5 357 aa27.08■■□□□ 1.93
IRF3-220ENST00000598108 CCDC136Q96JN2 1154 aa27.08■■□□□ 1.93
IRF3-220ENST00000598108 ZMYM6O95789 1325 aa27.08■■□□□ 1.93
IRF3-220ENST00000598108 PRMT2P55345 433 aa27.07■■□□□ 1.92
IRF3-220ENST00000598108 PAGR1Q9BTK6 254 aa27.07■■□□□ 1.92
IRF3-220ENST00000598108 TANGO6Q9C0B7 1094 aa27.07■■□□□ 1.92
IRF3-220ENST00000598108 SPDYE16A6NNV3 312 aaPredicted RBP27.06■■□□□ 1.92
IRF3-220ENST00000598108 TNPO2O14787 897 aaKnown RBP27.06■■□□□ 1.92
IRF3-220ENST00000598108 ORC4O43929 436 aa27.06■■□□□ 1.92
IRF3-220ENST00000598108 MYPNQ86TC9 1320 aa27.06■■□□□ 1.92
IRF3-220ENST00000598108 NEFLP07196 543 aa27.05■■□□□ 1.92
IRF3-220ENST00000598108 ERVK-9P63128 1117 aa27.05■■□□□ 1.92
IRF3-220ENST00000598108 ERVK-24P63145 666 aa27.05■■□□□ 1.92
IRF3-220ENST00000598108 COG2Q14746 738 aa27.05■■□□□ 1.92
IRF3-220ENST00000598108 LBX2Q6XYB7 198 aa27.05■■□□□ 1.92
IRF3-220ENST00000598108 NKX2-3Q8TAU0 364 aa27.05■■□□□ 1.92
IRF3-220ENST00000598108 GTF3C2Q8WUA4 911 aaPredicted RBP27.05■■□□□ 1.92
IRF3-220ENST00000598108 MKL1Q969V6 931 aa27.05■■□□□ 1.92
IRF3-220ENST00000598108 ARMC5Q96C12 935 aa27.05■■□□□ 1.92
IRF3-220ENST00000598108 DSCC1Q9BVC3 393 aa27.05■■□□□ 1.92
IRF3-220ENST00000598108 GOPCQ9HD26 462 aa27.05■■□□□ 1.92
IRF3-220ENST00000598108 BTBD7Q9P203 1132 aa27.05■■□□□ 1.92
IRF3-220ENST00000598108 RABGAP1Q9Y3P9 1069 aa27.05■■□□□ 1.92
IRF3-220ENST00000598108 PLIN4Q96Q06 1357 aa27.05■■□□□ 1.92
IRF3-220ENST00000598108 WDR46O15213 610 aaKnown RBP27.04■■□□□ 1.92
IRF3-220ENST00000598108 RAD21O60216 631 aa27.04■■□□□ 1.92
IRF3-220ENST00000598108 RANBP6O60518 1105 aaKnown RBP27.04■■□□□ 1.92
IRF3-220ENST00000598108 NMT2O60551 498 aa27.04■■□□□ 1.92
IRF3-220ENST00000598108 FLT3LGP49771 235 aa27.04■■□□□ 1.92
IRF3-220ENST00000598108 TBC1D10CQ8IV04 446 aa27.04■■□□□ 1.92
IRF3-220ENST00000598108 IL17RBQ9NRM6 502 aa27.04■■□□□ 1.92
IRF3-220ENST00000598108 HOXC10Q9NYD6 342 aa27.04■■□□□ 1.92
IRF3-220ENST00000598108 CENPFP49454 3210 aa27.03■■□□□ 1.92
IRF3-220ENST00000598108 TSPY2A6NKD2 308 aa27.03■■□□□ 1.92
IRF3-220ENST00000598108 F5H6K3 240 aa27.03■■□□□ 1.92
IRF3-220ENST00000598108 TTLL1O95922 423 aa27.03■■□□□ 1.92
IRF3-220ENST00000598108 SOX10P56693 466 aa27.03■■□□□ 1.92
IRF3-220ENST00000598108 KLRC3Q07444 240 aa27.03■■□□□ 1.92
IRF3-220ENST00000598108 RAET1EQ8TD07 263 aa27.03■■□□□ 1.92
IRF3-220ENST00000598108 SH3TC2Q8TF17 1288 aa27.03■■□□□ 1.92
IRF3-220ENST00000598108 NUP88Q99567 741 aaPredicted RBP27.03■■□□□ 1.92
IRF3-220ENST00000598108 PORCNQ9H237 461 aa27.03■■□□□ 1.92
IRF3-220ENST00000598108 FLOT1O75955 427 aa27.02■■□□□ 1.92
IRF3-220ENST00000598108 NDUFB10O96000 172 aa27.02■■□□□ 1.92
IRF3-220ENST00000598108 DSG3P32926 999 aa27.02■■□□□ 1.92
IRF3-220ENST00000598108 SLC9C1Q4G0N8 1177 aa27.02■■□□□ 1.92
IRF3-220ENST00000598108 RRP12Q5JTH9 1297 aaKnown RBP27.02■■□□□ 1.92
IRF3-220ENST00000598108 FAM83BQ5T0W9 1011 aa27.02■■□□□ 1.92
IRF3-220ENST00000598108 AKNAD1Q5T1N1 836 aa27.02■■□□□ 1.92
IRF3-220ENST00000598108 LRRC47Q8N1G4 583 aaKnown RBP27.02■■□□□ 1.92
IRF3-220ENST00000598108 COA7Q96BR5 231 aa27.02■■□□□ 1.92
IRF3-220ENST00000598108 TOMM22Q9NS69 142 aa27.02■■□□□ 1.92
IRF3-220ENST00000598108 FBXO28Q9NVF7 368 aa27.02■■□□□ 1.92
IRF3-220ENST00000598108 GJD2Q9UKL4 321 aa27.02■■□□□ 1.92
IRF3-220ENST00000598108 MYH8P13535 1937 aa27.02■■□□□ 1.92
IRF3-220ENST00000598108 GREB1LQ9C091 1923 aaPredicted RBP27.02■■□□□ 1.92
IRF3-220ENST00000598108 ZNF213O14771 459 aa27.01■■□□□ 1.91
IRF3-220ENST00000598108 STAG1Q8WVM7 1258 aa27.01■■□□□ 1.91
IRF3-220ENST00000598108 RAD50Q92878 1312 aa27■■□□□ 1.91
IRF3-220ENST00000598108 CENPBP07199 599 aaPredicted RBP27■■□□□ 1.91
IRF3-220ENST00000598108 SAMD1Q6SPF0 538 aaPredicted RBP27■■□□□ 1.91
IRF3-220ENST00000598108 RUFY2Q8WXA3 655 aa27■■□□□ 1.91
IRF3-220ENST00000598108 ATG4CQ96DT6 458 aa27■■□□□ 1.91
IRF3-220ENST00000598108 ZNF333Q96JL9 665 aa27■■□□□ 1.91
IRF3-220ENST00000598108 PTH1RQ03431 593 aa26.99■■□□□ 1.91
IRF3-220ENST00000598108 MFSD6Q6ZSS7 791 aa26.99■■□□□ 1.91
IRF3-220ENST00000598108 SGSM2O43147 1006 aa26.98■■□□□ 1.91
IRF3-220ENST00000598108 GRK4P32298 578 aa26.98■■□□□ 1.91
IRF3-220ENST00000598108 NOVP48745 357 aa26.98■■□□□ 1.91
IRF3-220ENST00000598108 NBPF11Q86T75 865 aa26.98■■□□□ 1.91
IRF3-220ENST00000598108 CTNNA3Q9UI47 895 aa26.98■■□□□ 1.91
IRF3-220ENST00000598108 SYNPO2Q9UMS6 1093 aa26.98■■□□□ 1.91
IRF3-220ENST00000598108 ADAMTS5Q9UNA0 930 aa26.98■■□□□ 1.91
IRF3-220ENST00000598108 NEDD4P46934 1319 aa26.97■■□□□ 1.91
IRF3-220ENST00000598108 MYCP01106 439 aaPredicted RBP26.97■■□□□ 1.91
IRF3-220ENST00000598108 MAPK4P31152 587 aa26.97■■□□□ 1.91
IRF3-220ENST00000598108 IRF5Q13568 498 aa26.97■■□□□ 1.91
IRF3-220ENST00000598108 GMCL1P1Q8NEA9 526 aa26.97■■□□□ 1.91
IRF3-220ENST00000598108 STX8Q9UNK0 236 aa26.97■■□□□ 1.91
IRF3-220ENST00000598108 ADCY3O60266 1144 aa26.96■■□□□ 1.91
IRF3-220ENST00000598108 PCP11498 1178 aaKnown RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms