RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 OAS2P29728 719 aaKnown RBP14.01□□□□□ -0.17
USHBP1-207ENST00000597928 TECP42680 631 aa14.01□□□□□ -0.17
USHBP1-207ENST00000597928 CHMP4BP1P59074 171 aa14.01□□□□□ -0.17
USHBP1-207ENST00000597928 CYP27A1Q02318 531 aa14.01□□□□□ -0.17
USHBP1-207ENST00000597928 TAF3Q5VWG9 929 aa14.01□□□□□ -0.17
USHBP1-207ENST00000597928 CLEC10AQ8IUN9 316 aa14.01□□□□□ -0.17
USHBP1-207ENST00000597928 RGS22Q8NE09 1264 aa14.01□□□□□ -0.17
USHBP1-207ENST00000597928 ANKRD7Q92527 254 aa14.01□□□□□ -0.17
USHBP1-207ENST00000597928 FAM207AQ9NSI2 230 aaPredicted RBP14.01□□□□□ -0.17
USHBP1-207ENST00000597928 SEC63Q9UGP8 760 aaKnown RBP14.01□□□□□ -0.17
USHBP1-207ENST00000597928 CTAGE9A4FU28 777 aa14□□□□□ -0.17
USHBP1-207ENST00000597928 VGLL3A8MV65 326 aa14□□□□□ -0.17
USHBP1-207ENST00000597928 LDHBP07195 334 aaKnown RBP14□□□□□ -0.17
USHBP1-207ENST00000597928 IBSPP21815 317 aaPredicted RBP14□□□□□ -0.17
USHBP1-207ENST00000597928 PTPREP23469 700 aa14□□□□□ -0.17
USHBP1-207ENST00000597928 EPS15P42566 896 aa14□□□□□ -0.17
USHBP1-207ENST00000597928 MEX3CQ5U5Q3 659 aaKnown RBP14□□□□□ -0.17
USHBP1-207ENST00000597928 NCAPH2Q6IBW4 605 aa14□□□□□ -0.17
USHBP1-207ENST00000597928 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14□□□□□ -0.17
USHBP1-207ENST00000597928 MRPL44Q9H9J2 332 aaKnown RBP14□□□□□ -0.17
USHBP1-207ENST00000597928 KANSL2Q9H9L4 492 aa14□□□□□ -0.17
USHBP1-207ENST00000597928 TCP11L1Q9NUJ3 509 aa14□□□□□ -0.17
USHBP1-207ENST00000597928 SALL1Q9NSC2 1324 aa14□□□□□ -0.17
USHBP1-207ENST00000597928 IL6STP40189 918 aaPredicted RBP14□□□□□ -0.17
USHBP1-207ENST00000597928 CACNB1Q02641 598 aaPredicted RBP14□□□□□ -0.17
USHBP1-207ENST00000597928 ITPK1Q13572 414 aa14□□□□□ -0.17
USHBP1-207ENST00000597928 CCDC122Q5T0U0 273 aa14□□□□□ -0.17
USHBP1-207ENST00000597928 USP17L2Q6R6M4 530 aa14□□□□□ -0.17
USHBP1-207ENST00000597928 PNMA1Q8ND90 353 aa14□□□□□ -0.17
USHBP1-207ENST00000597928 DDX41Q9UJV9 622 aaKnown RBP14□□□□□ -0.17
USHBP1-207ENST00000597928 FBXO2Q9UK22 296 aaPredicted RBP14□□□□□ -0.17
USHBP1-207ENST00000597928 TNS3Q68CZ2 1445 aa14□□□□□ -0.17
USHBP1-207ENST00000597928 CPDO75976 1380 aa14□□□□□ -0.17
USHBP1-207ENST00000597928 KIF5BP33176 963 aa13.99□□□□□ -0.17
USHBP1-207ENST00000597928 PDE4DQ08499 809 aa13.99□□□□□ -0.17
USHBP1-207ENST00000597928 SF3A3Q12874 501 aaKnown RBP eCLIP13.99□□□□□ -0.17
USHBP1-207ENST00000597928 NTRK3Q16288 839 aa13.99□□□□□ -0.17
USHBP1-207ENST00000597928 GOLGA1Q92805 767 aa13.99□□□□□ -0.17
USHBP1-207ENST00000597928 GJA10Q969M2 543 aa13.99□□□□□ -0.17
USHBP1-207ENST00000597928 AGXT2Q9BYV1 514 aa13.99□□□□□ -0.17
USHBP1-207ENST00000597928 CD44P16070 742 aaKnown RBP13.99□□□□□ -0.17
USHBP1-207ENST00000597928 ARID4AP29374 1257 aaPredicted RBP13.99□□□□□ -0.17
USHBP1-207ENST00000597928 PAK1Q13153 545 aa13.99□□□□□ -0.17
USHBP1-207ENST00000597928 NYAP1Q6ZVC0 841 aa13.99□□□□□ -0.17
USHBP1-207ENST00000597928 OSBPL5Q9H0X9 879 aaPredicted RBP13.99□□□□□ -0.17
USHBP1-207ENST00000597928 SLC39A2Q9NP94 309 aa13.99□□□□□ -0.17
USHBP1-207ENST00000597928 CTIFO43310 598 aaKnown RBP13.99□□□□□ -0.17
USHBP1-207ENST00000597928 LIFRP42702 1097 aa13.99□□□□□ -0.17
USHBP1-207ENST00000597928 TBC1D8BQ0IIM8 1120 aa13.99□□□□□ -0.17
USHBP1-207ENST00000597928 LRRC41Q15345 812 aa13.99□□□□□ -0.17
USHBP1-207ENST00000597928 PTF1AQ7RTS3 328 aa13.99□□□□□ -0.17
USHBP1-207ENST00000597928 TXNRD3Q86VQ6 643 aa13.99□□□□□ -0.17
USHBP1-207ENST00000597928 LRRC47Q8N1G4 583 aaKnown RBP13.99□□□□□ -0.17
USHBP1-207ENST00000597928 CRACR2AQ9BSW2 395 aa13.99□□□□□ -0.17
USHBP1-207ENST00000597928 GTPBP4Q9BZE4 634 aaKnown RBP13.99□□□□□ -0.17
USHBP1-207ENST00000597928 XRN1Q8IZH2 1706 aaKnown RBP13.99□□□□□ -0.17
USHBP1-207ENST00000597928 A0A087X0B3 334 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 IKBKBO14920 756 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 MORC3Q14149 939 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 CACNA2D4Q7Z3S7 1137 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 SRBD1Q8N5C6 995 aaKnown RBP13.98□□□□□ -0.17
USHBP1-207ENST00000597928 PARD6BQ9BYG5 372 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.98□□□□□ -0.17
USHBP1-207ENST00000597928 EXOC1Q9NV70 894 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 HDAC6Q9UBN7 1215 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 ARHGAP23Q9P227 1491 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 CCDC66A2RUB6 948 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 PLCD1P51178 756 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 CCDC181Q5TID7 509 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 CSGALNACT2Q8N6G5 542 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 RPGRQ92834 1020 aaKnown RBP13.98□□□□□ -0.17
USHBP1-207ENST00000597928 MAP3K14Q99558 947 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 LUC7L2Q9Y383 392 aaKnown RBP13.98□□□□□ -0.17
USHBP1-207ENST00000597928 RTL9Q8NET4 1388 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 CTAGE15A4D2H0 777 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 B4DLN1 442 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 KCNJ18B7U540 433 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 AKR1B10O60218 316 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 CTAGE8P0CG41 777 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 PNMA6AP0CW24 399 aaPredicted RBP13.98□□□□□ -0.17
USHBP1-207ENST00000597928 SCG2P13521 617 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 CXCR5P32302 372 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 KCNJ12Q14500 433 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 CTAGE6Q86UF2 777 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 CTAGE4Q8IX94 777 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 NELFCDQ8IXH7 590 aa13.98□□□□□ -0.17
USHBP1-207ENST00000597928 TCP10Q12799 353 aa13.97□□□□□ -0.17
USHBP1-207ENST00000597928 TBC1D9BQ66K14 1250 aa13.97□□□□□ -0.17
USHBP1-207ENST00000597928 NLRC4Q9NPP4 1024 aa13.97□□□□□ -0.17
USHBP1-207ENST00000597928 MINPP1Q9UNW1 487 aa13.97□□□□□ -0.17
USHBP1-207ENST00000597928 SRPRBQ9Y5M8 271 aaKnown RBP13.97□□□□□ -0.17
USHBP1-207ENST00000597928 FAM208AQ9UK61 1670 aaKnown RBP13.97□□□□□ -0.17
USHBP1-207ENST00000597928 PSDA5PKW4 1024 aaPredicted RBP13.97□□□□□ -0.17
USHBP1-207ENST00000597928 ABL1P00519 1130 aa13.97□□□□□ -0.17
USHBP1-207ENST00000597928 FXR1P51114 621 aaKnown RBP eCLIP13.97□□□□□ -0.17
USHBP1-207ENST00000597928 SMC1AQ14683 1233 aaKnown RBP13.97□□□□□ -0.17
USHBP1-207ENST00000597928 GSPT2Q8IYD1 628 aaKnown RBP13.97□□□□□ -0.17
USHBP1-207ENST00000597928 CHP1Q99653 195 aa13.97□□□□□ -0.17
USHBP1-207ENST00000597928 FOXP1Q9H334 677 aaPredicted RBP13.97□□□□□ -0.17
USHBP1-207ENST00000597928 SETD1AO15047 1707 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms