RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 OTUD7BQ6GQQ9 843 aa25.99■■□□□ 1.75
CHMP2A-204ENST00000597848 BLOC1S2Q6QNY1 142 aa25.99■■□□□ 1.75
CHMP2A-204ENST00000597848 DHX32Q7L7V1 743 aaKnown RBP25.99■■□□□ 1.75
CHMP2A-204ENST00000597848 ENAHQ8N8S7 591 aaPredicted RBP25.99■■□□□ 1.75
CHMP2A-204ENST00000597848 PROCA1Q8NCQ7 364 aaPredicted RBP25.99■■□□□ 1.75
CHMP2A-204ENST00000597848 TMEM47Q9BQJ4 181 aa25.99■■□□□ 1.75
CHMP2A-204ENST00000597848 C22orf23Q9BZE7 217 aa25.99■■□□□ 1.75
CHMP2A-204ENST00000597848 VCPKMTQ9H867 229 aa25.99■■□□□ 1.75
CHMP2A-204ENST00000597848 GREB1LQ9C091 1923 aaPredicted RBP25.98■■□□□ 1.75
CHMP2A-204ENST00000597848 CASTP20810 708 aaKnown RBP25.98■■□□□ 1.75
CHMP2A-204ENST00000597848 NOVP48745 357 aa25.98■■□□□ 1.75
CHMP2A-204ENST00000597848 ANAPC15P60006 121 aa25.98■■□□□ 1.75
CHMP2A-204ENST00000597848 MOGSQ13724 837 aa25.98■■□□□ 1.75
CHMP2A-204ENST00000597848 COL9A3Q14050 684 aaPredicted RBP25.98■■□□□ 1.75
CHMP2A-204ENST00000597848 RCSD1Q6JBY9 416 aa25.98■■□□□ 1.75
CHMP2A-204ENST00000597848 SPICE1Q8N0Z3 855 aa25.98■■□□□ 1.75
CHMP2A-204ENST00000597848 PTPN18Q99952 460 aa25.98■■□□□ 1.75
CHMP2A-204ENST00000597848 MTMR7Q9Y216 660 aa25.98■■□□□ 1.75
CHMP2A-204ENST00000597848 BTBD19C9JJ37 291 aa25.97■■□□□ 1.75
CHMP2A-204ENST00000597848 F5H6K3 240 aa25.97■■□□□ 1.75
CHMP2A-204ENST00000597848 CPA1P15085 419 aa25.97■■□□□ 1.75
CHMP2A-204ENST00000597848 KLRC3Q07444 240 aa25.97■■□□□ 1.75
CHMP2A-204ENST00000597848 WTAPQ15007 396 aa25.97■■□□□ 1.75
CHMP2A-204ENST00000597848 IFIT1BQ5T764 474 aaKnown RBP25.97■■□□□ 1.75
CHMP2A-204ENST00000597848 IFNL1Q8IU54 200 aa25.97■■□□□ 1.75
CHMP2A-204ENST00000597848 ANKS1AQ92625 1134 aa25.97■■□□□ 1.75
CHMP2A-204ENST00000597848 LRRC2Q9BYS8 371 aa25.97■■□□□ 1.75
CHMP2A-204ENST00000597848 KAT14Q9H8E8 782 aa25.97■■□□□ 1.75
CHMP2A-204ENST00000597848 SYNPO2Q9UMS6 1093 aa25.97■■□□□ 1.75
CHMP2A-204ENST00000597848 SEC23AQ15436 765 aa25.96■■□□□ 1.75
CHMP2A-204ENST00000597848 TREML2Q5T2D2 321 aa25.96■■□□□ 1.75
CHMP2A-204ENST00000597848 GPAT2Q6NUI2 795 aa25.96■■□□□ 1.75
CHMP2A-204ENST00000597848 ANKRD23Q86SG2 305 aa25.96■■□□□ 1.75
CHMP2A-204ENST00000597848 FAM43AQ8N2R8 423 aa25.96■■□□□ 1.75
CHMP2A-204ENST00000597848 LPAR1Q92633 364 aa25.96■■□□□ 1.75
CHMP2A-204ENST00000597848 CHMP4CQ96CF2 233 aa25.96■■□□□ 1.75
CHMP2A-204ENST00000597848 TMEM87BQ96K49 555 aa25.96■■□□□ 1.75
CHMP2A-204ENST00000597848 C12orf42Q96LP6 360 aa25.96■■□□□ 1.75
CHMP2A-204ENST00000597848 TCEANC2Q96MN5 208 aa25.96■■□□□ 1.75
CHMP2A-204ENST00000597848 AGTPBP1Q9UPW5 1226 aa25.96■■□□□ 1.75
CHMP2A-204ENST00000597848 IGF2BP3O00425 579 aaKnown RBP eCLIP25.95■■□□□ 1.74
CHMP2A-204ENST00000597848 FGD1P98174 961 aa25.95■■□□□ 1.74
CHMP2A-204ENST00000597848 EXOSC10Q01780 885 aaKnown RBP25.95■■□□□ 1.74
CHMP2A-204ENST00000597848 KIAA1755Q5JYT7 1200 aa25.95■■□□□ 1.74
CHMP2A-204ENST00000597848 SLFN13Q68D06 897 aa25.95■■□□□ 1.74
CHMP2A-204ENST00000597848 IGDCC4Q8TDY8 1250 aa25.95■■□□□ 1.74
CHMP2A-204ENST00000597848 MTA3Q9BTC8 594 aa25.95■■□□□ 1.74
CHMP2A-204ENST00000597848 TM6SF1Q9BZW5 370 aa25.95■■□□□ 1.74
CHMP2A-204ENST00000597848 WDR19Q8NEZ3 1342 aa25.94■■□□□ 1.74
CHMP2A-204ENST00000597848 PDHXO00330 501 aa25.94■■□□□ 1.74
CHMP2A-204ENST00000597848 NDUFB10O96000 172 aa25.94■■□□□ 1.74
CHMP2A-204ENST00000597848 VCAM1P19320 739 aa25.94■■□□□ 1.74
CHMP2A-204ENST00000597848 RPS6KB1P23443 525 aa25.94■■□□□ 1.74
CHMP2A-204ENST00000597848 PABPC4Q13310 644 aaKnown RBP eCLIP25.94■■□□□ 1.74
CHMP2A-204ENST00000597848 GMCL1P1Q8NEA9 526 aa25.94■■□□□ 1.74
CHMP2A-204ENST00000597848 ZSWIM6Q9HCJ5 1215 aa25.94■■□□□ 1.74
CHMP2A-204ENST00000597848 GPHNQ9NQX3 736 aaPredicted RBP25.94■■□□□ 1.74
CHMP2A-204ENST00000597848 ISY1Q9ULR0 285 aaKnown RBP25.94■■□□□ 1.74
CHMP2A-204ENST00000597848 CYP46A1Q9Y6A2 500 aa25.94■■□□□ 1.74
CHMP2A-204ENST00000597848 MAP2K1Q02750 393 aaPredicted RBP25.93■■□□□ 1.74
CHMP2A-204ENST00000597848 NFXL1Q6ZNB6 911 aa25.93■■□□□ 1.74
CHMP2A-204ENST00000597848 RUFY3Q7L099 469 aa25.93■■□□□ 1.74
CHMP2A-204ENST00000597848 PNMA1Q8ND90 353 aa25.93■■□□□ 1.74
CHMP2A-204ENST00000597848 UPF3BQ9BZI7 483 aaKnown RBP25.93■■□□□ 1.74
CHMP2A-204ENST00000597848 RPAP3Q9H6T3 665 aaPredicted RBP25.93■■□□□ 1.74
CHMP2A-204ENST00000597848 SH2B2O14492 632 aaPredicted RBP25.92■■□□□ 1.74
CHMP2A-204ENST00000597848 WDR46O15213 610 aaKnown RBP25.92■■□□□ 1.74
CHMP2A-204ENST00000597848 ALDH1A1P00352 501 aa25.92■■□□□ 1.74
CHMP2A-204ENST00000597848 OSBPP22059 807 aa25.92■■□□□ 1.74
CHMP2A-204ENST00000597848 TMTC2Q8N394 836 aa25.92■■□□□ 1.74
CHMP2A-204ENST00000597848 NUP88Q99567 741 aaPredicted RBP25.92■■□□□ 1.74
CHMP2A-204ENST00000597848 BEGAINQ9BUH8 593 aa25.92■■□□□ 1.74
CHMP2A-204ENST00000597848 TANGO6Q9C0B7 1094 aa25.92■■□□□ 1.74
CHMP2A-204ENST00000597848 LY9Q9HBG7 655 aa25.92■■□□□ 1.74
CHMP2A-204ENST00000597848 SENP2Q9HC62 589 aa25.92■■□□□ 1.74
CHMP2A-204ENST00000597848 USP17L15C9J2P7 530 aa25.91■■□□□ 1.74
CHMP2A-204ENST00000597848 USP17L13C9JLJ4 530 aa25.91■■□□□ 1.74
CHMP2A-204ENST00000597848 USP17L11C9JVI0 530 aa25.91■■□□□ 1.74
CHMP2A-204ENST00000597848 USP17L18D6R9N7 530 aa25.91■■□□□ 1.74
CHMP2A-204ENST00000597848 USP17L22D6RA61 530 aa25.91■■□□□ 1.74
CHMP2A-204ENST00000597848 USP17L17D6RBQ6 530 aa25.91■■□□□ 1.74
CHMP2A-204ENST00000597848 USP17L19D6RCP7 530 aa25.91■■□□□ 1.74
CHMP2A-204ENST00000597848 USP17L20D6RJB6 530 aa25.91■■□□□ 1.74
CHMP2A-204ENST00000597848 SLC1A4P43007 532 aa25.91■■□□□ 1.74
CHMP2A-204ENST00000597848 USP17L24Q0WX57 530 aa25.91■■□□□ 1.74
CHMP2A-204ENST00000597848 FAM83BQ5T0W9 1011 aa25.91■■□□□ 1.74
CHMP2A-204ENST00000597848 CCDC69A6NI79 296 aa25.9■■□□□ 1.74
CHMP2A-204ENST00000597848 HOXA7P31268 230 aaPredicted RBP25.9■■□□□ 1.74
CHMP2A-204ENST00000597848 RBM25P49756 843 aaKnown RBP25.9■■□□□ 1.74
CHMP2A-204ENST00000597848 IRX3P78415 501 aaPredicted RBP25.9■■□□□ 1.74
CHMP2A-204ENST00000597848 TAF1CQ15572 869 aaPredicted RBP25.9■■□□□ 1.74
CHMP2A-204ENST00000597848 Q6ZUG5 572 aa25.9■■□□□ 1.74
CHMP2A-204ENST00000597848 ZCCHC17Q9NP64 241 aaKnown RBP25.9■■□□□ 1.74
CHMP2A-204ENST00000597848 RNF186Q9NXI6 227 aa25.9■■□□□ 1.74
CHMP2A-204ENST00000597848 PNMA3Q9UL41 463 aa25.9■■□□□ 1.74
CHMP2A-204ENST00000597848 SLC45A1Q9Y2W3 748 aa25.9■■□□□ 1.74
CHMP2A-204ENST00000597848 PTPRFP10586 1907 aa25.89■■□□□ 1.74
CHMP2A-204ENST00000597848 MYH4Q9Y623 1939 aa25.89■■□□□ 1.74
CHMP2A-204ENST00000597848 TRPA1O75762 1119 aa25.89■■□□□ 1.74
CHMP2A-204ENST00000597848 BMP3P12645 472 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms