RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 MTCH2Q9Y6C9 303 aa16.12■□□□□ 0.17
IRF3-218ENST00000597369 VAMP4O75379 141 aa16.11■□□□□ 0.17
IRF3-218ENST00000597369 RARBP10826 455 aa16.11■□□□□ 0.17
IRF3-218ENST00000597369 CSF2RAP15509 400 aa16.11■□□□□ 0.17
IRF3-218ENST00000597369 PRAMEF19Q5SWL8 479 aa16.11■□□□□ 0.17
IRF3-218ENST00000597369 SPTY2D1Q68D10 685 aaPredicted RBP16.11■□□□□ 0.17
IRF3-218ENST00000597369 CATSPERGQ6ZRH7 1159 aa16.11■□□□□ 0.17
IRF3-218ENST00000597369 METTL16Q86W50 562 aaKnown RBP16.11■□□□□ 0.17
IRF3-218ENST00000597369 HLA-CQ95604 372 aa16.11■□□□□ 0.17
IRF3-218ENST00000597369 FBXL18Q96ME1 805 aa16.11■□□□□ 0.17
IRF3-218ENST00000597369 SLC5A4Q9NY91 659 aa16.11■□□□□ 0.17
IRF3-218ENST00000597369 PDS5AQ29RF7 1337 aaKnown RBP16.11■□□□□ 0.17
IRF3-218ENST00000597369 EYA2O00167 538 aa16.1■□□□□ 0.17
IRF3-218ENST00000597369 NUP133Q8WUM0 1156 aa16.1■□□□□ 0.17
IRF3-218ENST00000597369 MTIF3Q9H2K0 278 aaKnown RBP16.1■□□□□ 0.17
IRF3-218ENST00000597369 DHX36Q9H2U1 1008 aaKnown RBP16.1■□□□□ 0.17
IRF3-218ENST00000597369 MROH7Q68CQ1 1323 aa16.1■□□□□ 0.17
IRF3-218ENST00000597369 GTPBP6O43824 516 aaPredicted RBP16.09■□□□□ 0.17
IRF3-218ENST00000597369 COBLO75128 1261 aa16.09■□□□□ 0.17
IRF3-218ENST00000597369 ACRP10323 421 aa16.09■□□□□ 0.17
IRF3-218ENST00000597369 CCDC184Q52MB2 194 aa16.09■□□□□ 0.17
IRF3-218ENST00000597369 PPP2R2DQ66LE6 453 aa16.09■□□□□ 0.17
IRF3-218ENST00000597369 STARD7Q9NQZ5 370 aa16.09■□□□□ 0.17
IRF3-218ENST00000597369 ABCF2Q9UG63 623 aa16.09■□□□□ 0.17
IRF3-218ENST00000597369 ZBTB21Q9ULJ3 1066 aa16.09■□□□□ 0.17
IRF3-218ENST00000597369 PGK1P00558 417 aa16.08■□□□□ 0.16
IRF3-218ENST00000597369 PHKA1P46020 1223 aa16.08■□□□□ 0.16
IRF3-218ENST00000597369 CDK7P50613 346 aa16.08■□□□□ 0.16
IRF3-218ENST00000597369 MECOMQ03112 1051 aa16.08■□□□□ 0.16
IRF3-218ENST00000597369 ATP2B3Q16720 1220 aa16.08■□□□□ 0.16
IRF3-218ENST00000597369 FOXP4Q8IVH2 680 aaPredicted RBP16.08■□□□□ 0.16
IRF3-218ENST00000597369 ZNF384Q8TF68 577 aa16.08■□□□□ 0.16
IRF3-218ENST00000597369 IL23AQ9NPF7 189 aa16.08■□□□□ 0.16
IRF3-218ENST00000597369 PCDHA11Q9Y5I1 949 aa16.08■□□□□ 0.16
IRF3-218ENST00000597369 ROBO3Q96MS0 1386 aa16.08■□□□□ 0.16
IRF3-218ENST00000597369 TRIOO75962 3097 aa16.07■□□□□ 0.16
IRF3-218ENST00000597369 MOXD2PA6NHM9 499 aa16.07■□□□□ 0.16
IRF3-218ENST00000597369 SPDYE16A6NNV3 312 aaPredicted RBP16.07■□□□□ 0.16
IRF3-218ENST00000597369 ST18O60284 1047 aa16.07■□□□□ 0.16
IRF3-218ENST00000597369 FGBP02675 491 aa16.07■□□□□ 0.16
IRF3-218ENST00000597369 ALADP13716 330 aa16.07■□□□□ 0.16
IRF3-218ENST00000597369 ACLYP53396 1101 aa16.07■□□□□ 0.16
IRF3-218ENST00000597369 CCDC27Q2M243 656 aa16.07■□□□□ 0.16
IRF3-218ENST00000597369 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
IRF3-218ENST00000597369 ATG9AQ7Z3C6 839 aa16.07■□□□□ 0.16
IRF3-218ENST00000597369 ABRAQ8N0Z2 381 aa16.07■□□□□ 0.16
IRF3-218ENST00000597369 SHCBP1Q8NEM2 672 aa16.07■□□□□ 0.16
IRF3-218ENST00000597369 MAML3Q96JK9 1138 aa16.07■□□□□ 0.16
IRF3-218ENST00000597369 DNAJC18Q9H819 358 aa16.07■□□□□ 0.16
IRF3-218ENST00000597369 CDK5RAP2Q96SN8 1893 aa16.06■□□□□ 0.16
IRF3-218ENST00000597369 ELP1O95163 1332 aa16.06■□□□□ 0.16
IRF3-218ENST00000597369 IL16Q14005 1332 aa16.06■□□□□ 0.16
IRF3-218ENST00000597369 ADAMTS4O75173 837 aa16.06■□□□□ 0.16
IRF3-218ENST00000597369 LDHCP07864 332 aa16.06■□□□□ 0.16
IRF3-218ENST00000597369 RFX5P48382 616 aaPredicted RBP16.06■□□□□ 0.16
IRF3-218ENST00000597369 SHROOM1Q2M3G4 852 aaPredicted RBP16.06■□□□□ 0.16
IRF3-218ENST00000597369 SLC4A10Q6U841 1118 aa16.06■□□□□ 0.16
IRF3-218ENST00000597369 UIMC1Q96RL1 719 aa16.06■□□□□ 0.16
IRF3-218ENST00000597369 MOV10L1Q9BXT6 1211 aaKnown RBP16.06■□□□□ 0.16
IRF3-218ENST00000597369 C5orf42Q9H799 3197 aa16.05■□□□□ 0.16
IRF3-218ENST00000597369 GDF11O95390 407 aa16.05■□□□□ 0.16
IRF3-218ENST00000597369 USP14P54578 494 aa16.05■□□□□ 0.16
IRF3-218ENST00000597369 RASGRF1Q13972 1273 aa16.05■□□□□ 0.16
IRF3-218ENST00000597369 CSPP1Q1MSJ5 1256 aa16.05■□□□□ 0.16
IRF3-218ENST00000597369 CCDC102BQ68D86 513 aa16.05■□□□□ 0.16
IRF3-218ENST00000597369 ERICH6Q7L0X2 663 aa16.05■□□□□ 0.16
IRF3-218ENST00000597369 FBXO3Q9UK99 471 aa16.05■□□□□ 0.16
IRF3-218ENST00000597369 VCAM1P19320 739 aa16.04■□□□□ 0.16
IRF3-218ENST00000597369 RABGGTBP53611 331 aa16.04■□□□□ 0.16
IRF3-218ENST00000597369 GSTO1P78417 241 aa16.04■□□□□ 0.16
IRF3-218ENST00000597369 CCSAPQ6IQ19 270 aaPredicted RBP16.04■□□□□ 0.16
IRF3-218ENST00000597369 FAM9BQ8IZU0 186 aa16.04■□□□□ 0.16
IRF3-218ENST00000597369 GJD3Q8N144 294 aa16.04■□□□□ 0.16
IRF3-218ENST00000597369 KLHDC9Q8NEP7 349 aa16.04■□□□□ 0.16
IRF3-218ENST00000597369 NSUN4Q96CB9 384 aaKnown RBP16.04■□□□□ 0.16
IRF3-218ENST00000597369 A0A0G2JMZ2 1700 aa16.04■□□□□ 0.16
IRF3-218ENST00000597369 MYOGP15173 224 aa16.03■□□□□ 0.16
IRF3-218ENST00000597369 ERCC3P19447 782 aa16.03■□□□□ 0.16
IRF3-218ENST00000597369 WWC1Q8IX03 1113 aa16.03■□□□□ 0.16
IRF3-218ENST00000597369 FAM178BQ8IXR5 827 aa16.03■□□□□ 0.16
IRF3-218ENST00000597369 TEX11Q8IYF3 940 aa16.03■□□□□ 0.16
IRF3-218ENST00000597369 SPATC1LQ9H0A9 340 aa16.03■□□□□ 0.16
IRF3-218ENST00000597369 KIAA1683Q9H0B3 1180 aa16.03■□□□□ 0.16
IRF3-218ENST00000597369 MROH8Q9H579 483 aa16.03■□□□□ 0.16
IRF3-218ENST00000597369 CEP126Q9P2H0 1117 aa16.03■□□□□ 0.16
IRF3-218ENST00000597369 FOCADQ5VW36 1801 aa16.03■□□□□ 0.16
IRF3-218ENST00000597369 APBB1O00213 710 aa16.02■□□□□ 0.16
IRF3-218ENST00000597369 RFXAPO00287 272 aa16.02■□□□□ 0.16
IRF3-218ENST00000597369 CIAO1O76071 339 aa16.02■□□□□ 0.16
IRF3-218ENST00000597369 AKR1A1P14550 325 aa16.02■□□□□ 0.16
IRF3-218ENST00000597369 OTOP2Q7RTS6 562 aa16.02■□□□□ 0.16
IRF3-218ENST00000597369 GLT1D1Q96MS3 346 aa16.02■□□□□ 0.16
IRF3-218ENST00000597369 PPP1R12CQ9BZL4 782 aa16.02■□□□□ 0.16
IRF3-218ENST00000597369 HOXC10Q9NYD6 342 aa16.02■□□□□ 0.16
IRF3-218ENST00000597369 SLC4A7Q9Y6M7 1214 aa16.02■□□□□ 0.16
IRF3-218ENST00000597369 MYO15AQ9UKN7 3530 aa16.02■□□□□ 0.15
IRF3-218ENST00000597369 ZNF865P0CJ78 1059 aaPredicted RBP16.01■□□□□ 0.15
IRF3-218ENST00000597369 ZYXQ15942 572 aaKnown RBP16.01■□□□□ 0.15
IRF3-218ENST00000597369 KCNA10Q16322 511 aa16.01■□□□□ 0.15
IRF3-218ENST00000597369 FAM126BQ8IXS8 530 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms